RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 PES1O00541 588 aaKnown RBP17.5■□□□□ 0.39
SHROOM1-201ENST00000319854 CUL4BQ13620 913 aa17.5■□□□□ 0.39
SHROOM1-201ENST00000319854 BRD3Q15059 726 aa17.5■□□□□ 0.39
SHROOM1-201ENST00000319854 ZNF579Q8NAF0 562 aaKnown RBP17.5■□□□□ 0.39
SHROOM1-201ENST00000319854 MLKLQ8NB16 471 aa17.5■□□□□ 0.39
SHROOM1-201ENST00000319854 LZTFL1Q9NQ48 299 aa17.5■□□□□ 0.39
SHROOM1-201ENST00000319854 CTNND2Q9UQB3 1225 aa17.5■□□□□ 0.39
SHROOM1-201ENST00000319854 KLRF2D3W0D1 207 aa17.5■□□□□ 0.39
SHROOM1-201ENST00000319854 PCP11498 1178 aaKnown RBP17.5■□□□□ 0.39
SHROOM1-201ENST00000319854 RASA1P20936 1047 aa17.5■□□□□ 0.39
SHROOM1-201ENST00000319854 MAD2L2Q9UI95 211 aa17.5■□□□□ 0.39
SHROOM1-201ENST00000319854 L1RE1Q9UN81 338 aa17.5■□□□□ 0.39
SHROOM1-201ENST00000319854 CDK8P49336 464 aa17.49■□□□□ 0.39
SHROOM1-201ENST00000319854 DDR1Q08345 913 aa17.49■□□□□ 0.39
SHROOM1-201ENST00000319854 RTFDC1Q9BY42 306 aaPredicted RBP17.49■□□□□ 0.39
SHROOM1-201ENST00000319854 MKRN1Q9UHC7 482 aaKnown RBP17.49■□□□□ 0.39
SHROOM1-201ENST00000319854 LOC102724159A0A0B4J2E5 919 aa17.49■□□□□ 0.39
SHROOM1-201ENST00000319854 HSPA1LP34931 641 aa17.49■□□□□ 0.39
SHROOM1-201ENST00000319854 GSTO1P78417 241 aa17.49■□□□□ 0.39
SHROOM1-201ENST00000319854 PWP2Q15269 919 aaKnown RBP17.49■□□□□ 0.39
SHROOM1-201ENST00000319854 RRAGBQ5VZM2 374 aa17.49■□□□□ 0.39
SHROOM1-201ENST00000319854 LRRC31Q6UY01 552 aa17.49■□□□□ 0.39
SHROOM1-201ENST00000319854 LRRC47Q8N1G4 583 aaKnown RBP17.49■□□□□ 0.39
SHROOM1-201ENST00000319854 TMEM60Q9H2L4 133 aa17.49■□□□□ 0.39
SHROOM1-201ENST00000319854 JRKLQ9Y4A0 524 aa17.49■□□□□ 0.39
SHROOM1-201ENST00000319854 LAMB2P55268 1798 aa17.49■□□□□ 0.39
SHROOM1-201ENST00000319854 IRS2Q9Y4H2 1338 aa17.49■□□□□ 0.39
SHROOM1-201ENST00000319854 RREB1Q92766 1687 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 STX10O60499 249 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 MAGEA9P43362 315 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 SARSP49591 514 aaKnown RBP17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 MSL1Q68DK7 614 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 SRGAP1Q7Z6B7 1085 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 FERMT2Q96AC1 680 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 SOWAHDA6NJG2 315 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 LDHCP07864 332 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 ATP2C1P98194 919 aaPredicted RBP17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 DPYDQ12882 1025 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 LETM2Q2VYF4 491 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 KANK3Q6NY19 840 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 CEP95Q96GE4 821 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 TNRC6CQ9HCJ0 1690 aaKnown RBP17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 RHOXF2BP0C7M4 288 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 NAPAP54920 295 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 HDXQ7Z353 690 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 TBC1D16Q8TBP0 767 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 RBM17Q96I25 401 aaKnown RBP17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 DRC1Q96MC2 740 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 RHOXF2Q9BQY4 288 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 QTRT2Q9H974 415 aaKnown RBP17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 DACH1Q9UI36 760 aa17.48■□□□□ 0.39
SHROOM1-201ENST00000319854 SYNRGQ9UMZ2 1314 aa17.47■□□□□ 0.39
SHROOM1-201ENST00000319854 SKIDA1Q1XH10 827 aa17.47■□□□□ 0.39
SHROOM1-201ENST00000319854 TTC31Q49AM3 519 aaPredicted RBP17.47■□□□□ 0.39
SHROOM1-201ENST00000319854 JAKMIP3Q5VZ66 844 aa17.47■□□□□ 0.39
SHROOM1-201ENST00000319854 G3V3G9 751 aa17.47■□□□□ 0.39
SHROOM1-201ENST00000319854 IVLP07476 585 aa17.47■□□□□ 0.39
SHROOM1-201ENST00000319854 DCAF8Q5TAQ9 597 aa17.47■□□□□ 0.39
SHROOM1-201ENST00000319854 DGKHQ86XP1 1220 aa17.47■□□□□ 0.39
SHROOM1-201ENST00000319854 HNRNPLLQ8WVV9 542 aaKnown RBP17.47■□□□□ 0.39
SHROOM1-201ENST00000319854 MTRQ99707 1265 aa17.47■□□□□ 0.39
SHROOM1-201ENST00000319854 GDAQ9Y2T3 454 aa17.47■□□□□ 0.39
SHROOM1-201ENST00000319854 SCN7AQ01118 1682 aa17.47■□□□□ 0.39
SHROOM1-201ENST00000319854 STAT6P42226 847 aa17.46■□□□□ 0.39
SHROOM1-201ENST00000319854 VSNL1P62760 191 aa17.46■□□□□ 0.39
SHROOM1-201ENST00000319854 YY1AP1Q9H869 796 aa17.46■□□□□ 0.39
SHROOM1-201ENST00000319854 RAB21Q9UL25 225 aa17.46■□□□□ 0.39
SHROOM1-201ENST00000319854 PCDHA4Q9UN74 947 aa17.46■□□□□ 0.39
SHROOM1-201ENST00000319854 FLT1P17948 1338 aa17.46■□□□□ 0.39
SHROOM1-201ENST00000319854 ABL1P00519 1130 aa17.46■□□□□ 0.39
SHROOM1-201ENST00000319854 ENOX1Q8TC92 643 aaKnown RBP17.46■□□□□ 0.39
SHROOM1-201ENST00000319854 VPS16Q9H269 839 aa17.46■□□□□ 0.39
SHROOM1-201ENST00000319854 GOLGA6L9A6NEM1 432 aa17.46■□□□□ 0.39
SHROOM1-201ENST00000319854 CACNB3P54284 484 aa17.46■□□□□ 0.39
SHROOM1-201ENST00000319854 GPCPD1Q9NPB8 672 aa17.46■□□□□ 0.39
SHROOM1-201ENST00000319854 BIN2Q9UBW5 565 aaPredicted RBP17.46■□□□□ 0.39
SHROOM1-201ENST00000319854 A0A1B0GUL6 1792 aa17.45■□□□□ 0.38
SHROOM1-201ENST00000319854 USP17L5A8MUK1 530 aa17.45■□□□□ 0.38
SHROOM1-201ENST00000319854 RPS6KA5O75582 802 aa17.45■□□□□ 0.38
SHROOM1-201ENST00000319854 CALML3P27482 149 aa17.45■□□□□ 0.38
SHROOM1-201ENST00000319854 SPECC1LQ69YQ0 1117 aa17.45■□□□□ 0.38
SHROOM1-201ENST00000319854 RAD9BQ6WBX8 426 aa17.45■□□□□ 0.38
SHROOM1-201ENST00000319854 PIGSQ96S52 555 aa17.45■□□□□ 0.38
SHROOM1-201ENST00000319854 FAM196BA6NMK8 535 aa17.45■□□□□ 0.38
SHROOM1-201ENST00000319854 MPHOSPH10O00566 681 aaKnown RBP17.45■□□□□ 0.38
SHROOM1-201ENST00000319854 GUCY2CP25092 1073 aa17.45■□□□□ 0.38
SHROOM1-201ENST00000319854 NT5DC1Q5TFE4 455 aa17.45■□□□□ 0.38
SHROOM1-201ENST00000319854 GOLGA6L1Q8N7Z2 621 aa17.45■□□□□ 0.38
SHROOM1-201ENST00000319854 CCDC102AQ96A19 550 aa17.45■□□□□ 0.38
SHROOM1-201ENST00000319854 PCDHA6Q9UN73 950 aa17.45■□□□□ 0.38
SHROOM1-201ENST00000319854 PCDHA8Q9Y5H6 950 aa17.45■□□□□ 0.38
SHROOM1-201ENST00000319854 LRRIQ3A6PVS8 624 aaPredicted RBP17.44■□□□□ 0.38
SHROOM1-201ENST00000319854 CCNT1O60563 726 aaKnown RBP17.44■□□□□ 0.38
SHROOM1-201ENST00000319854 CASP8Q14790 479 aa17.44■□□□□ 0.38
SHROOM1-201ENST00000319854 GRM4Q14833 912 aa17.44■□□□□ 0.38
SHROOM1-201ENST00000319854 DTHD1Q6ZMT9 781 aa17.44■□□□□ 0.38
SHROOM1-201ENST00000319854 CASZ1Q86V15 1759 aa17.44■□□□□ 0.38
SHROOM1-201ENST00000319854 PARP1P09874 1014 aaKnown RBP17.44■□□□□ 0.38
SHROOM1-201ENST00000319854 ZNF18P17022 549 aa17.44■□□□□ 0.38
SHROOM1-201ENST00000319854 UBA7P41226 1012 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms