RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.63□□□□□ -1.03
TRIM55-202ENST00000315962 KRT222Q8N1A0 295 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 ZNF397Q8NF99 534 aaPredicted RBP8.63□□□□□ -1.03
TRIM55-202ENST00000315962 ZDHHC15Q96MV8 337 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 FEZ1Q99689 392 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 MTA3Q9BTC8 594 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 ANO10Q9NW15 660 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 SEC63Q9UGP8 760 aaKnown RBP8.63□□□□□ -1.03
TRIM55-202ENST00000315962 PCDHA6Q9UN73 950 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 PCDHA8Q9Y5H6 950 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 SLX4Q8IY92 1834 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 TMEM232C9JQI7 657 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 STXBP3O00186 592 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 FANCGO15287 622 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 CUTAO60888 179 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 KIF20AO95235 890 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 GH2P01242 217 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 ECE1P42892 770 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 GYS2P54840 703 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 KARSQ15046 597 aaKnown RBP8.63□□□□□ -1.03
TRIM55-202ENST00000315962 PPP2R5BQ15173 497 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 USH1GQ495M9 461 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 ARHGAP29Q52LW3 1261 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 TNFRSF25Q93038 417 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 ZCCHC17Q9NP64 241 aaKnown RBP8.63□□□□□ -1.03
TRIM55-202ENST00000315962 HPSEQ9Y251 543 aa8.63□□□□□ -1.03
TRIM55-202ENST00000315962 ANKRD31Q8N7Z5 1873 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 SLU7O95391 586 aaKnown RBP8.62□□□□□ -1.03
TRIM55-202ENST00000315962 TTLL1O95922 423 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 DGKZQ13574 1117 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 TERF2Q15554 542 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 HHIPL2Q6UWX4 724 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 ADGRF4Q8IZF3 695 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 OGFOD1Q8N543 542 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 BBXQ8WY36 941 aaPredicted RBP8.62□□□□□ -1.03
TRIM55-202ENST00000315962 RRP36Q96EU6 259 aaKnown RBP8.62□□□□□ -1.03
TRIM55-202ENST00000315962 CCDC34Q96HJ3 373 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 MRFAP1L1Q96HT8 127 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 BARHL2Q9NY43 387 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 PCDHA4Q9UN74 947 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 SRPRBQ9Y5M8 271 aaKnown RBP8.62□□□□□ -1.03
TRIM55-202ENST00000315962 ASTN2O75129 1339 aaPredicted RBP8.62□□□□□ -1.03
TRIM55-202ENST00000315962 USP17L15C9J2P7 530 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 USP17L13C9JLJ4 530 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 USP17L11C9JVI0 530 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 USP17L18D6R9N7 530 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 USP17L22D6RA61 530 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 USP17L17D6RBQ6 530 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 USP17L19D6RCP7 530 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 USP17L20D6RJB6 530 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 CTAGE5O15320 804 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 PPP1R11O60927 126 aaPredicted RBP8.62□□□□□ -1.03
TRIM55-202ENST00000315962 URI1O94763 535 aaPredicted RBP8.62□□□□□ -1.03
TRIM55-202ENST00000315962 SFPQP23246 707 aaKnown RBP eCLIP8.62□□□□□ -1.03
TRIM55-202ENST00000315962 CLCN6P51797 869 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 RCAN1P53805 252 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 USP17L24Q0WX57 530 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 USP17L6PQ6QN14 398 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 NEK11Q8NG66 645 aa8.62□□□□□ -1.03
TRIM55-202ENST00000315962 BRCA2P51587 3418 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 TECP42680 631 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 SLC1A4P43007 532 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 POSTNQ15063 836 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 PI4KBQ9UBF8 816 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 GJA3Q9Y6H8 435 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 TIAM2Q8IVF5 1701 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 ADAMTSL1Q8N6G6 1762 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 TXKP42681 527 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 TNNI2P48788 182 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 SOGA3Q5TF21 947 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 DLK2Q6UY11 383 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 SLC30A10Q6XR72 485 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 SIAH1Q8IUQ4 282 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 TBCKQ8TEA7 893 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 JMJD4Q9H9V9 463 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 FANCLQ9NW38 375 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 MORC2Q9Y6X9 1032 aaPredicted RBP8.61□□□□□ -1.03
TRIM55-202ENST00000315962 NID2Q14112 1375 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 ROBO3Q96MS0 1386 aa8.61□□□□□ -1.03
TRIM55-202ENST00000315962 A0A1W2PRG0 241 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 TFRCP02786 760 aaKnown RBP8.6□□□□□ -1.03
TRIM55-202ENST00000315962 CXCL9Q07325 125 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 DLGAP5Q15398 846 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 PAXIP1Q6ZW49 1069 aaPredicted RBP8.6□□□□□ -1.03
TRIM55-202ENST00000315962 SAMD7Q7Z3H4 446 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 DESI2Q9BSY9 194 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 CARD6Q9BX69 1037 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 GLIS2Q9BZE0 524 aaPredicted RBP8.6□□□□□ -1.03
TRIM55-202ENST00000315962 TCP11L1Q9NUJ3 509 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 CEP131Q9UPN4 1083 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 SERPINC1P01008 464 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 ERCC3P19447 782 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 MDM2Q00987 491 aaPredicted RBP8.6□□□□□ -1.03
TRIM55-202ENST00000315962 ICA1Q05084 483 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 FMR1Q06787 632 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIM55-202ENST00000315962 CCDC93Q567U6 631 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 SARM1Q6SZW1 724 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 ACER1Q8TDN7 264 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 ERO1AQ96HE7 468 aa8.6□□□□□ -1.03
TRIM55-202ENST00000315962 ACTN4O43707 911 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms