RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 MYO1AQ9UBC5 1043 aa15.2■□□□□ 0.02
SPAST-201ENST00000315285 ABCB4P21439 1286 aa15.2■□□□□ 0.02
SPAST-201ENST00000315285 CYP2J2P51589 502 aa15.2■□□□□ 0.02
SPAST-201ENST00000315285 TRPC3Q13507 836 aa15.2■□□□□ 0.02
SPAST-201ENST00000315285 UAP1Q16222 522 aaPredicted RBP15.2■□□□□ 0.02
SPAST-201ENST00000315285 LONRF2Q1L5Z9 754 aa15.2■□□□□ 0.02
SPAST-201ENST00000315285 VSTM4Q8IW00 320 aa15.2■□□□□ 0.02
SPAST-201ENST00000315285 KIF2CQ99661 725 aa15.2■□□□□ 0.02
SPAST-201ENST00000315285 PICK1Q9NRD5 415 aa15.2■□□□□ 0.02
SPAST-201ENST00000315285 TAOK1Q7L7X3 1001 aa15.2■□□□□ 0.02
SPAST-201ENST00000315285 PPM1EQ8WY54 764 aa15.2■□□□□ 0.02
SPAST-201ENST00000315285 CROCC2H7BZ55 1655 aa15.2■□□□□ 0.02
SPAST-201ENST00000315285 ALDH1B1P30837 517 aa15.19■□□□□ 0.02
SPAST-201ENST00000315285 ARHGAP25P42331 645 aa15.19■□□□□ 0.02
SPAST-201ENST00000315285 GBP6Q6ZN66 633 aa15.19■□□□□ 0.02
SPAST-201ENST00000315285 SAMSN1Q9NSI8 373 aaKnown RBP15.19■□□□□ 0.02
SPAST-201ENST00000315285 A2ML1A8K2U0 1454 aa15.19■□□□□ 0.02
SPAST-201ENST00000315285 ADAM9Q13443 819 aa15.19■□□□□ 0.02
SPAST-201ENST00000315285 LARGE2Q8N3Y3 721 aa15.19■□□□□ 0.02
SPAST-201ENST00000315285 KIFC2Q96AC6 838 aa15.19■□□□□ 0.02
SPAST-201ENST00000315285 PCDHB6Q9Y5E3 794 aa15.19■□□□□ 0.02
SPAST-201ENST00000315285 SRPRBQ9Y5M8 271 aaKnown RBP15.19■□□□□ 0.02
SPAST-201ENST00000315285 ANKRD13CQ8N6S4 541 aa15.19■□□□□ 0.02
SPAST-201ENST00000315285 CHURC1Q8WUH1 139 aa15.19■□□□□ 0.02
SPAST-201ENST00000315285 DHTKD1Q96HY7 919 aaPredicted RBP15.19■□□□□ 0.02
SPAST-201ENST00000315285 AK8Q96MA6 479 aa15.19■□□□□ 0.02
SPAST-201ENST00000315285 MED4Q9NPJ6 270 aa15.19■□□□□ 0.02
SPAST-201ENST00000315285 ERCC6L2Q5T890 1561 aa15.19■□□□□ 0.02
SPAST-201ENST00000315285 RASGRF1Q13972 1273 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 TTLL11Q8NHH1 800 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 MRRFQ96E11 262 aaKnown RBP15.18■□□□□ 0.02
SPAST-201ENST00000315285 CCDC97Q96F63 343 aaPredicted RBP15.18■□□□□ 0.02
SPAST-201ENST00000315285 TRIM7Q9C029 511 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 SPTLC3Q9NUV7 552 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 USTQ9Y2C2 406 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 ABCC12Q96J65 1359 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 ATP1A3P13637 1013 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 CTNNA1P35221 906 aaKnown RBP15.18■□□□□ 0.02
SPAST-201ENST00000315285 ZNF658Q5TYW1 1059 aaPredicted RBP15.18■□□□□ 0.02
SPAST-201ENST00000315285 PGBD1Q96JS3 809 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 ERVV-1B6SEH8 477 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 E7EVH7 732 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 KRIT1O00522 736 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 LARP4BQ92615 738 aaKnown RBP15.18■□□□□ 0.02
SPAST-201ENST00000315285 METTL14Q9HCE5 456 aaKnown RBP15.18■□□□□ 0.02
SPAST-201ENST00000315285 FAM169AQ9Y6X4 670 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 ABCA6Q8N139 1617 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 PRPF3O43395 683 aaKnown RBP15.18■□□□□ 0.02
SPAST-201ENST00000315285 ZBED4O75132 1171 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 SLFNL1Q499Z3 407 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 DCUN1D2Q6PH85 259 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 SARM1Q6SZW1 724 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 ZNF354CQ86Y25 554 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 P2RX5Q93086 422 aa15.18■□□□□ 0.02
SPAST-201ENST00000315285 ENC1O14682 589 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 MCAMP43121 646 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 SCNN1DP51172 638 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 CEP85LQ5SZL2 805 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 DENND2CQ68D51 928 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 FNBP4Q8N3X1 1017 aaPredicted RBP15.17■□□□□ 0.02
SPAST-201ENST00000315285 IWS1Q96ST2 819 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 PDE11AQ9HCR9 933 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 TMOD4Q9NZQ9 345 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 STIM2Q9P246 746 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 COL4A3BPQ9Y5P4 624 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 FAM170AA1A519 330 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 H2AFZP0C0S5 128 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 DLGAP5Q15398 846 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 H2AFVQ71UI9 128 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 MIER3Q7Z3K6 550 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 FBXO11Q86XK2 927 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 PLCB1Q9NQ66 1216 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 PCDHA1Q9Y5I3 950 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 QRICH2Q9H0J4 1663 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 ALKQ9UM73 1620 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 CYP27B1O15528 508 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 GNGT1P63211 74 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 SUPT20HQ8NEM7 779 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 FAM71BQ8TC56 605 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 GJB4Q9NTQ9 266 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 PPFIA4O75335 1185 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 GAS8O95995 478 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 PTPROQ16827 1216 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 CERKLQ49MI3 558 aaPredicted RBP15.17■□□□□ 0.02
SPAST-201ENST00000315285 RETREG2Q8NC44 543 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 STRBPQ96SI9 672 aaKnown RBP15.17■□□□□ 0.02
SPAST-201ENST00000315285 ADGRL3Q9HAR2 1447 aa15.17■□□□□ 0.02
SPAST-201ENST00000315285 ATP8B1O43520 1251 aa15.16■□□□□ 0.02
SPAST-201ENST00000315285 SEC31AO94979 1220 aaKnown RBP15.16■□□□□ 0.02
SPAST-201ENST00000315285 CDC25AP30304 524 aa15.16■□□□□ 0.02
SPAST-201ENST00000315285 ICA1Q05084 483 aa15.16■□□□□ 0.02
SPAST-201ENST00000315285 FAM178BQ8IXR5 827 aa15.16■□□□□ 0.02
SPAST-201ENST00000315285 XDHP47989 1333 aa15.16■□□□□ 0.02
SPAST-201ENST00000315285 GOLGA8KD6RF30 607 aa15.16■□□□□ 0.02
SPAST-201ENST00000315285 POLD1P28340 1107 aa15.16■□□□□ 0.02
SPAST-201ENST00000315285 PDLIM2Q96JY6 352 aa15.16■□□□□ 0.02
SPAST-201ENST00000315285 FAM204AQ9H8W3 233 aa15.16■□□□□ 0.02
SPAST-201ENST00000315285 PARP2Q9UGN5 583 aa15.16■□□□□ 0.02
SPAST-201ENST00000315285 LEMD3Q9Y2U8 911 aa15.16■□□□□ 0.02
SPAST-201ENST00000315285 GJA3Q9Y6H8 435 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms