RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 RAD17O75943 681 aa14.07□□□□□ -0.16
RNF4-201ENST00000314289 CCZ1BP86790 482 aa14.07□□□□□ -0.16
RNF4-201ENST00000314289 CCZ1P86791 482 aaPredicted RBP14.07□□□□□ -0.16
RNF4-201ENST00000314289 DHX8Q14562 1220 aaKnown RBP14.07□□□□□ -0.16
RNF4-201ENST00000314289 UBE2SQ16763 222 aa14.07□□□□□ -0.16
RNF4-201ENST00000314289 DTHD1Q6ZMT9 781 aa14.07□□□□□ -0.16
RNF4-201ENST00000314289 TBCKQ8TEA7 893 aa14.07□□□□□ -0.16
RNF4-201ENST00000314289 GJA10Q969M2 543 aa14.07□□□□□ -0.16
RNF4-201ENST00000314289 ZMYND12Q9H0C1 365 aa14.07□□□□□ -0.16
RNF4-201ENST00000314289 STK32BQ9NY57 414 aa14.07□□□□□ -0.16
RNF4-201ENST00000314289 NRXN2Q9P2S2 1712 aa14.07□□□□□ -0.16
RNF4-201ENST00000314289 YDJCA8MPS7 323 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 DPYDQ12882 1025 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 E2F4Q16254 413 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 NT5DC1Q5TFE4 455 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 STRIP1Q5VSL9 837 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 KANK3Q6NY19 840 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 ADGRF4Q8IZF3 695 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 IQUBQ8NA54 791 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 USP17L10C9JJH3 530 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 TAL1P17542 331 aaPredicted RBP14.06□□□□□ -0.16
RNF4-201ENST00000314289 CCDC112Q8NEF3 446 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 PRMT6Q96LA8 375 aaPredicted RBP14.06□□□□□ -0.16
RNF4-201ENST00000314289 ZDHHC15Q96MV8 337 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 CAMKK2Q96RR4 588 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 C6orf50Q9HD87 102 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 INTS13Q9NVM9 706 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 CLRN2A0PK11 232 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 PPP1R11O60927 126 aaPredicted RBP14.06□□□□□ -0.16
RNF4-201ENST00000314289 KIF20AO95235 890 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 STAT6P42226 847 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 SH3RF1Q7Z6J0 888 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 NUP88Q99567 741 aaPredicted RBP14.06□□□□□ -0.16
RNF4-201ENST00000314289 LZTS2Q9BRK4 669 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 ZBTB12Q9Y330 459 aaPredicted RBP14.06□□□□□ -0.16
RNF4-201ENST00000314289 MYH8P13535 1937 aa14.06□□□□□ -0.16
RNF4-201ENST00000314289 TECP42680 631 aa14.05□□□□□ -0.16
RNF4-201ENST00000314289 SEPT2Q15019 361 aa14.05□□□□□ -0.16
RNF4-201ENST00000314289 STYK1Q6J9G0 422 aa14.05□□□□□ -0.16
RNF4-201ENST00000314289 PDXDC2PQ6P474 469 aa14.05□□□□□ -0.16
RNF4-201ENST00000314289 REXO1Q8N1G1 1221 aaKnown RBP14.05□□□□□ -0.16
RNF4-201ENST00000314289 MLKLQ8NB16 471 aa14.05□□□□□ -0.16
RNF4-201ENST00000314289 SPATA20Q8TB22 786 aa14.05□□□□□ -0.16
RNF4-201ENST00000314289 LRRC15Q8TF66 581 aa14.05□□□□□ -0.16
RNF4-201ENST00000314289 EEF2KMTQ96G04 330 aa14.05□□□□□ -0.16
RNF4-201ENST00000314289 JMJD4Q9H9V9 463 aa14.05□□□□□ -0.16
RNF4-201ENST00000314289 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.05□□□□□ -0.16
RNF4-201ENST00000314289 V9GYY5 206 aaPredicted RBP14.05□□□□□ -0.16
RNF4-201ENST00000314289 IGKV6D-41A0A0C4DH26 115 aa14.05□□□□□ -0.16
RNF4-201ENST00000314289 EEF2P13639 858 aaKnown RBP14.05□□□□□ -0.16
RNF4-201ENST00000314289 NONOQ15233 471 aaKnown RBP eCLIP14.05□□□□□ -0.166e-7■■■□□ 19.2
RNF4-201ENST00000314289 POTEDQ86YR6 584 aa14.05□□□□□ -0.16
RNF4-201ENST00000314289 CNKSR1Q969H4 720 aa14.05□□□□□ -0.16
RNF4-201ENST00000314289 TRIM34Q9BYJ4 488 aa14.05□□□□□ -0.16
RNF4-201ENST00000314289 ZNF277Q9NRM2 450 aaPredicted RBP14.05□□□□□ -0.16
RNF4-201ENST00000314289 UBA7P41226 1012 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 JAG1P78504 1218 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 CERKLQ49MI3 558 aaPredicted RBP14.04□□□□□ -0.16
RNF4-201ENST00000314289 C7orf43Q8WVR3 580 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 RIOX1Q9H6W3 641 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 CTNND2Q9UQB3 1225 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 GDAQ9Y2T3 454 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 TCP10L2B9ZVM9 353 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 SFPQP23246 707 aaKnown RBP eCLIP14.04□□□□□ -0.16
RNF4-201ENST00000314289 GNA11P29992 359 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 TXKP42681 527 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 TNNI2P48788 182 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 ZNF543Q08ER8 600 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 FOCADQ5VW36 1801 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 TDP2O95551 362 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 NAALADL2Q58DX5 795 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 RRAGBQ5VZM2 374 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 DAGLBQ8NCG7 672 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 OGFRQ9NZT2 677 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 SWAP70Q9UH65 585 aa14.04□□□□□ -0.16
RNF4-201ENST00000314289 NEMFO60524 1076 aa14.03□□□□□ -0.16
RNF4-201ENST00000314289 LONP1P36776 959 aaKnown RBP14.03□□□□□ -0.16
RNF4-201ENST00000314289 NOVP48745 357 aa14.03□□□□□ -0.16
RNF4-201ENST00000314289 SAMD1Q6SPF0 538 aaPredicted RBP14.03□□□□□ -0.16
RNF4-201ENST00000314289 NEK8Q86SG6 692 aa14.03□□□□□ -0.16
RNF4-201ENST00000314289 SPICE1Q8N0Z3 855 aa14.03□□□□□ -0.16
RNF4-201ENST00000314289 FEZ1Q99689 392 aa14.03□□□□□ -0.16
RNF4-201ENST00000314289 DISC1Q9NRI5 854 aa14.03□□□□□ -0.16
RNF4-201ENST00000314289 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.03□□□□□ -0.16
RNF4-201ENST00000314289 TXLNAP40222 546 aa14.03□□□□□ -0.16
RNF4-201ENST00000314289 ASPRV1Q53RT3 343 aa14.03□□□□□ -0.16
RNF4-201ENST00000314289 ARL6IP4Q66PJ3 421 aaKnown RBP14.03□□□□□ -0.16
RNF4-201ENST00000314289 ELOA2Q8IYF1 753 aaPredicted RBP14.03□□□□□ -0.16
RNF4-201ENST00000314289 CCDC12Q8WUD4 166 aaPredicted RBP14.03□□□□□ -0.16
RNF4-201ENST00000314289 CCDC34Q96HJ3 373 aa14.03□□□□□ -0.16
RNF4-201ENST00000314289 PPP1R3GB7ZBB8 358 aa14.02□□□□□ -0.16
RNF4-201ENST00000314289 SLC37A4O43826 429 aa14.02□□□□□ -0.16
RNF4-201ENST00000314289 HMGB2P26583 209 aaKnown RBP14.02□□□□□ -0.16
RNF4-201ENST00000314289 CDAN1Q8IWY9 1227 aa14.02□□□□□ -0.16
RNF4-201ENST00000314289 ENOX1Q8TC92 643 aaKnown RBP14.02□□□□□ -0.16
RNF4-201ENST00000314289 PI4KBQ9UBF8 816 aa14.02□□□□□ -0.16
RNF4-201ENST00000314289 SYNRGQ9UMZ2 1314 aa14.02□□□□□ -0.17
RNF4-201ENST00000314289 TEX33O43247 280 aa14.02□□□□□ -0.17
RNF4-201ENST00000314289 SLC1A4P43007 532 aa14.02□□□□□ -0.17
RNF4-201ENST00000314289 ADCY7P51828 1080 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms