RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 KIFC2Q96AC6 838 aa9.68□□□□□ -0.86
TPM3-203ENST00000312970 XPNPEP3Q9NQH7 507 aa9.68□□□□□ -0.86
TPM3-203ENST00000312970 CNPY2Q9Y2B0 182 aa9.68□□□□□ -0.86
TPM3-203ENST00000312970 ATP11BQ9Y2G3 1177 aa9.68□□□□□ -0.86
TPM3-203ENST00000312970 RIPK3Q9Y572 518 aa9.68□□□□□ -0.86
TPM3-203ENST00000312970 SMCHD1A6NHR9 2005 aa9.68□□□□□ -0.86
TPM3-203ENST00000312970 NCOR1O75376 2440 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 GREB1LQ9C091 1923 aaPredicted RBP9.67□□□□□ -0.86
TPM3-203ENST00000312970 DNAJC25-GNG10A0A024R161 153 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 ZNF865P0CJ78 1059 aaPredicted RBP9.67□□□□□ -0.86
TPM3-203ENST00000312970 FDX1P10109 184 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 PYGBP11216 843 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 BMP3P12645 472 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 AKR1A1P14550 325 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 TAL1P17542 331 aaPredicted RBP9.67□□□□□ -0.86
TPM3-203ENST00000312970 FAM47AQ5JRC9 791 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 PPP4R3BQ5MIZ7 849 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 C1orf53Q5VUE5 145 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 SLFN13Q68D06 897 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 MAMDC4Q6UXC1 1216 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 ANKRD35Q8N283 1001 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 CHURC1Q8WUH1 139 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 FERMT2Q96AC1 680 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 EVI5LQ96CN4 794 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 SLC38A10Q9HBR0 1119 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 RAVER2Q9HCJ3 691 aaKnown RBP9.67□□□□□ -0.86
TPM3-203ENST00000312970 FBXO40Q9UH90 709 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 PHF24Q9UPV7 400 aa9.67□□□□□ -0.86
TPM3-203ENST00000312970 SYNGAP1Q96PV0 1343 aa9.66□□□□□ -0.86
TPM3-203ENST00000312970 TMEM232C9JQI7 657 aa9.66□□□□□ -0.86
TPM3-203ENST00000312970 SNAI1O95863 264 aaPredicted RBP9.66□□□□□ -0.86
TPM3-203ENST00000312970 PGK1P00558 417 aa9.66□□□□□ -0.86
TPM3-203ENST00000312970 OAZ1P54368 228 aa9.66□□□□□ -0.86
TPM3-203ENST00000312970 SNX17Q15036 470 aa9.66□□□□□ -0.86
TPM3-203ENST00000312970 ZNF467Q7Z7K2 595 aaPredicted RBP9.66□□□□□ -0.86
TPM3-203ENST00000312970 LRRC47Q8N1G4 583 aaKnown RBP9.66□□□□□ -0.86
TPM3-203ENST00000312970 CHST13Q8NET6 341 aa9.66□□□□□ -0.86
TPM3-203ENST00000312970 CRBNQ96SW2 442 aa9.66□□□□□ -0.86
TPM3-203ENST00000312970 TSEN34Q9BSV6 310 aaKnown RBP9.66□□□□□ -0.86
TPM3-203ENST00000312970 HELLSQ9NRZ9 838 aa9.66□□□□□ -0.86
TPM3-203ENST00000312970 FAM184BQ9ULE4 1060 aa9.66□□□□□ -0.86
TPM3-203ENST00000312970 SALL3Q9BXA9 1300 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 MYH4Q9Y623 1939 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 TSPY2A6NKD2 308 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 PLA2G6O60733 806 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 MCCP23508 829 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 SLC1A4P43007 532 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 STAT2P52630 851 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 PDE1AP54750 535 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 TLE2Q04725 743 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 CTDSPL2Q05D32 466 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 HDAC1Q13547 482 aaPredicted RBP9.65□□□□□ -0.86
TPM3-203ENST00000312970 ALX1Q15699 326 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 TRIM60Q495X7 471 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 RCSD1Q6JBY9 416 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 CCDC129Q6ZRS4 1044 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 FAM160B2Q86V87 743 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 TICAM2Q86XR7 235 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 STAG1Q8WVM7 1258 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 GMCL1Q96IK5 515 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 CDX2Q99626 313 aaPredicted RBP9.65□□□□□ -0.86
TPM3-203ENST00000312970 ABHD16BQ9H3Z7 469 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 INCENPQ9NQS7 918 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 PRDM5Q9NQX1 630 aaPredicted RBP9.65□□□□□ -0.86
TPM3-203ENST00000312970 RAPGEFL1Q9UHV5 662 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 ANAPC4Q9UJX5 808 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 ISY1Q9ULR0 285 aaKnown RBP9.65□□□□□ -0.86
TPM3-203ENST00000312970 STX8Q9UNK0 236 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.65□□□□□ -0.86
TPM3-203ENST00000312970 TACC3Q9Y6A5 838 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 PLXNA1Q9UIW2 1896 aa9.65□□□□□ -0.86
TPM3-203ENST00000312970 PLIN4Q96Q06 1357 aa9.64□□□□□ -0.87
TPM3-203ENST00000312970 A0A1W2PQ45 241 aaPredicted RBP9.64□□□□□ -0.87
TPM3-203ENST00000312970 A0A1W2PQY0 241 aa9.64□□□□□ -0.87
TPM3-203ENST00000312970 TRIM43BA6NCK2 446 aa9.64□□□□□ -0.87
TPM3-203ENST00000312970 FOXP2O15409 715 aa9.64□□□□□ -0.87
TPM3-203ENST00000312970 RANBP6O60518 1105 aaKnown RBP9.64□□□□□ -0.87
TPM3-203ENST00000312970 DUSP11O75319 330 aaKnown RBP9.64□□□□□ -0.87
TPM3-203ENST00000312970 COL9A1P20849 921 aa9.64□□□□□ -0.87
TPM3-203ENST00000312970 IKQ13123 557 aaPredicted RBP9.64□□□□□ -0.87
TPM3-203ENST00000312970 AAMPQ13685 434 aa9.64□□□□□ -0.87
TPM3-203ENST00000312970 ACVR2BQ13705 512 aa9.64□□□□□ -0.87
TPM3-203ENST00000312970 MCMDC2Q4G0Z9 681 aa9.64□□□□□ -0.87
TPM3-203ENST00000312970 GPIHBP1Q8IV16 184 aa9.64□□□□□ -0.87
TPM3-203ENST00000312970 NUP133Q8WUM0 1156 aa9.64□□□□□ -0.87
TPM3-203ENST00000312970 BADQ92934 168 aa9.64□□□□□ -0.87
TPM3-203ENST00000312970 TRIM43Q96BQ3 446 aaPredicted RBP9.64□□□□□ -0.87
TPM3-203ENST00000312970 IL17RBQ9NRM6 502 aa9.64□□□□□ -0.87
TPM3-203ENST00000312970 ZHX1Q9UKY1 873 aaPredicted RBP9.64□□□□□ -0.87
TPM3-203ENST00000312970 MOXD2PA6NHM9 499 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 ORC4O43929 436 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 ADAMTS4O75173 837 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 FGAP02671 866 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 FGRP09769 529 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 ACLYP53396 1101 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 PDE4DQ08499 809 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 SHHQ15465 462 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 KCNA10Q16322 511 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 TKFCQ3LXA3 575 aa9.63□□□□□ -0.87
TPM3-203ENST00000312970 CCDC144BQ3MJ40 725 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms