RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 ARMCX3Q9UH62 379 aaPredicted RBP16.88■□□□□ 0.29
HCFC1-201ENST00000310441 CNPY4Q8N129 248 aa16.88■□□□□ 0.29
HCFC1-201ENST00000310441 TACO1Q9BSH4 297 aaKnown RBP16.88■□□□□ 0.29
HCFC1-201ENST00000310441 ABCA5Q8WWZ7 1642 aa16.88■□□□□ 0.29
HCFC1-201ENST00000310441 TMOD1P28289 359 aa16.88■□□□□ 0.29
HCFC1-201ENST00000310441 EEF1DP29692 281 aaKnown RBP16.88■□□□□ 0.29
HCFC1-201ENST00000310441 CEP19Q96LK0 163 aa16.88■□□□□ 0.29
HCFC1-201ENST00000310441 CCDC184Q52MB2 194 aa16.88■□□□□ 0.29
HCFC1-201ENST00000310441 MYOCDQ8IZQ8 938 aa16.88■□□□□ 0.29
HCFC1-201ENST00000310441 ANKRD42Q8N9B4 389 aa16.88■□□□□ 0.29
HCFC1-201ENST00000310441 RABGGTAQ92696 567 aa16.88■□□□□ 0.29
HCFC1-201ENST00000310441 CUEDC2Q9H467 287 aa16.88■□□□□ 0.29
HCFC1-201ENST00000310441 DONSONQ9NYP3 566 aa16.88■□□□□ 0.29
HCFC1-201ENST00000310441 SYCP2Q9BX26 1530 aa16.88■□□□□ 0.29
HCFC1-201ENST00000310441 FAM83GA6ND36 823 aa16.88■□□□□ 0.29
HCFC1-201ENST00000310441 UPF3AQ9H1J1 476 aaKnown RBP16.88■□□□□ 0.29
HCFC1-201ENST00000310441 UHRF1BP1LA0JNW5 1464 aa16.88■□□□□ 0.29
HCFC1-201ENST00000310441 SCYL3Q8IZE3 742 aa16.87■□□□□ 0.29
HCFC1-201ENST00000310441 ARPP21Q9UBL0 812 aaPredicted RBP16.87■□□□□ 0.29
HCFC1-201ENST00000310441 GSTA4O15217 222 aa16.87■□□□□ 0.29
HCFC1-201ENST00000310441 MAP3K7O43318 606 aa16.87■□□□□ 0.29
HCFC1-201ENST00000310441 MORC3Q14149 939 aa16.87■□□□□ 0.29
HCFC1-201ENST00000310441 C8orf34Q49A92 452 aa16.87■□□□□ 0.29
HCFC1-201ENST00000310441 XPOTO43592 962 aaKnown RBP16.87■□□□□ 0.29
HCFC1-201ENST00000310441 GUCY2FP51841 1108 aa16.87■□□□□ 0.29
HCFC1-201ENST00000310441 RNF14Q9UBS8 474 aa16.87■□□□□ 0.29
HCFC1-201ENST00000310441 POTEB3A0JP26 581 aa16.87■□□□□ 0.29
HCFC1-201ENST00000310441 RBM6P78332 1123 aaKnown RBP16.87■□□□□ 0.29
HCFC1-201ENST00000310441 POTEBQ6S5H4 581 aa16.87■□□□□ 0.29
HCFC1-201ENST00000310441 TMCO5AQ8N6Q1 288 aa16.87■□□□□ 0.29
HCFC1-201ENST00000310441 SLF1Q9BQI6 1058 aa16.87■□□□□ 0.29
HCFC1-201ENST00000310441 PKD2L1Q9P0L9 805 aa16.87■□□□□ 0.29
HCFC1-201ENST00000310441 HSPA6P17066 643 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 KCNA4P22459 653 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 RAPH1Q70E73 1250 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 BCAS4Q8TDM0 211 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 GDAP1L1Q96MZ0 367 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 LCMT1Q9UIC8 334 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 PCDHB15Q9Y5E8 787 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 BFSP1Q12934 665 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 SPOUT1Q5T280 376 aaKnown RBP16.86■□□□□ 0.29
HCFC1-201ENST00000310441 ST7Q9NRC1 585 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 NPATQ14207 1427 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 TRAPPC8Q9Y2L5 1435 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 MYCLP12524 364 aaPredicted RBP16.86■□□□□ 0.29
HCFC1-201ENST00000310441 ADALQ6DHV7 355 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 RETREG2Q8NC44 543 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 FAM207AQ9NSI2 230 aaPredicted RBP16.86■□□□□ 0.29
HCFC1-201ENST00000310441 ATP8B3O60423 1300 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 ATG16L1Q676U5 607 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 GGA1Q9UJY5 639 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 LIG4P49917 911 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 ANKRD35Q8N283 1001 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 LRRC43Q8N309 656 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 KLHDC4Q8TBB5 520 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 PARD3Q8TEW0 1356 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 MCF2LO15068 1137 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 GPAA1O43292 621 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 ARHGDIAP52565 204 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.86■□□□□ 0.29
HCFC1-201ENST00000310441 KRT80Q6KB66 452 aa16.86■□□□□ 0.29
HCFC1-201ENST00000310441 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.86■□□□□ 0.29
HCFC1-201ENST00000310441 IPO5O00410 1097 aaKnown RBP16.85■□□□□ 0.29
HCFC1-201ENST00000310441 BEGAINQ9BUH8 593 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 INTS9Q9NV88 658 aaKnown RBP16.85■□□□□ 0.29
HCFC1-201ENST00000310441 STK17AQ9UEE5 414 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 B4E1Z4 1266 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 CDC25BP30305 580 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 MCF2L2Q86YR7 1114 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 GIPC2Q8TF65 315 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 ATP8A2Q9NTI2 1148 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 KIF24Q5T7B8 1368 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 TNRQ92752 1358 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 ITKQ08881 620 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 CABP7Q86V35 215 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 AS3MTQ9HBK9 375 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 EIF3BP55884 814 aaKnown RBP16.85■□□□□ 0.29
HCFC1-201ENST00000310441 LRRC23Q53EV4 343 aaPredicted RBP16.85■□□□□ 0.29
HCFC1-201ENST00000310441 LRRC37BQ96QE4 947 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 CHURC1Q8WUH1 139 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 TAB2Q9NYJ8 693 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 KIAA1468Q9P260 1216 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 MAPK8IP1Q9UQF2 711 aa16.85■□□□□ 0.29
HCFC1-201ENST00000310441 CHEK2O96017 543 aa16.84■□□□□ 0.29
HCFC1-201ENST00000310441 RXRAP19793 462 aa16.84■□□□□ 0.29
HCFC1-201ENST00000310441 ST13P4Q8IZP2 240 aaPredicted RBP16.84■□□□□ 0.29
HCFC1-201ENST00000310441 U2AF1L4Q8WU68 220 aaKnown RBP16.84■□□□□ 0.29
HCFC1-201ENST00000310441 PSMB7Q99436 277 aa16.84■□□□□ 0.29
HCFC1-201ENST00000310441 SLC12A6Q9UHW9 1150 aa16.84■□□□□ 0.29
HCFC1-201ENST00000310441 V9GY48 417 aaPredicted RBP16.84■□□□□ 0.29
HCFC1-201ENST00000310441 MYL1P05976 194 aa16.84■□□□□ 0.29
HCFC1-201ENST00000310441 EEF1B2P24534 225 aaKnown RBP16.84■□□□□ 0.29
HCFC1-201ENST00000310441 DIS3L2Q8IYB7 885 aaKnown RBP16.84■□□□□ 0.29
HCFC1-201ENST00000310441 FBXL13Q8NEE6 735 aa16.84■□□□□ 0.29
HCFC1-201ENST00000310441 ZNF518AQ6AHZ1 1483 aa16.84■□□□□ 0.29
HCFC1-201ENST00000310441 ARHGEF9O43307 516 aa16.84■□□□□ 0.29
HCFC1-201ENST00000310441 ACTR5Q9H9F9 607 aaPredicted RBP16.84■□□□□ 0.29
HCFC1-201ENST00000310441 COL4A3BPQ9Y5P4 624 aa16.84■□□□□ 0.29
HCFC1-201ENST00000310441 EPHB4P54760 987 aa16.84■□□□□ 0.29
HCFC1-201ENST00000310441 PPP2R5AQ15172 486 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms