RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 EIF3CQ99613 913 aaKnown RBP14.15□□□□□ -0.14
RETREG3-201ENST00000309428 TMX4Q9H1E5 349 aaPredicted RBP14.15□□□□□ -0.14
RETREG3-201ENST00000309428 GOPCQ9HD26 462 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 TMEM260Q9NX78 707 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 MYO6Q9UM54 1294 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 TMCO5BA8MYB1 307 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 KLRF2D3W0D1 207 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 TRIM37O94972 964 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 H2AFXP16104 143 aaPredicted RBP14.15□□□□□ -0.14
RETREG3-201ENST00000309428 KIF5BP33176 963 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 VSNL1P62760 191 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 GNGT1P63211 74 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 KANK3Q6NY19 840 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 FOXR1Q6PIV2 292 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 IQUBQ8NA54 791 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 NSUN4Q96CB9 384 aaKnown RBP14.15□□□□□ -0.14
RETREG3-201ENST00000309428 PAGE5Q96GU1 130 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 SEPT11Q9NVA2 429 aaKnown RBP14.15□□□□□ -0.14
RETREG3-201ENST00000309428 CAPN7Q9Y6W3 813 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 RTL9Q8NET4 1388 aa14.15□□□□□ -0.14
RETREG3-201ENST00000309428 KRT86O43790 486 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 USO1O60763 962 aaKnown RBP14.14□□□□□ -0.15
RETREG3-201ENST00000309428 BAG3O95817 575 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 NOP2P46087 812 aaKnown RBP14.14□□□□□ -0.15
RETREG3-201ENST00000309428 CYP27A1Q02318 531 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 KIAA0825Q8IV33 1275 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 CTAGE1Q96RT6 745 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 ABCC12Q96J65 1359 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 KDM3BQ7LBC6 1761 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 SLIT3O75094 1523 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 LOC102724159A0A0B4J2E5 919 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 FRMD3A2A2Y4 597 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 GUCY2FP51841 1108 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 PRPF4BQ13523 1007 aaKnown RBP14.14□□□□□ -0.15
RETREG3-201ENST00000309428 PWP2Q15269 919 aaKnown RBP14.14□□□□□ -0.15
RETREG3-201ENST00000309428 SGMS1Q86VZ5 419 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 EXOC4Q96A65 974 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 SLC39A2Q9NP94 309 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 PPP6R2O75170 966 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 EYA3Q99504 573 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 PKD2L1Q9P0L9 805 aa14.14□□□□□ -0.15
RETREG3-201ENST00000309428 H3BQF6 201 aa14.13□□□□□ -0.15
RETREG3-201ENST00000309428 SLC7A5Q01650 507 aa14.13□□□□□ -0.15
RETREG3-201ENST00000309428 TBC1D10BQ4KMP7 808 aaPredicted RBP14.13□□□□□ -0.15
RETREG3-201ENST00000309428 TRIM10Q9UDY6 481 aa14.13□□□□□ -0.15
RETREG3-201ENST00000309428 TBC1D8BQ0IIM8 1120 aa14.13□□□□□ -0.15
RETREG3-201ENST00000309428 UBE4AQ14139 1066 aa14.13□□□□□ -0.15
RETREG3-201ENST00000309428 UBE2SQ16763 222 aa14.13□□□□□ -0.15
RETREG3-201ENST00000309428 NELFCDQ8IXH7 590 aa14.13□□□□□ -0.15
RETREG3-201ENST00000309428 IKBKBO14920 756 aa14.13□□□□□ -0.15
RETREG3-201ENST00000309428 CYLC1P35663 651 aaPredicted RBP14.13□□□□□ -0.15
RETREG3-201ENST00000309428 USH1GQ495M9 461 aa14.13□□□□□ -0.15
RETREG3-201ENST00000309428 KCTD1Q719H9 257 aa14.13□□□□□ -0.15
RETREG3-201ENST00000309428 BLIDQ8IZY5 108 aa14.13□□□□□ -0.15
RETREG3-201ENST00000309428 PIGSQ96S52 555 aa14.13□□□□□ -0.15
RETREG3-201ENST00000309428 FAM207AQ9NSI2 230 aaPredicted RBP14.13□□□□□ -0.15
RETREG3-201ENST00000309428 BSDC1Q9NW68 430 aaPredicted RBP14.13□□□□□ -0.15
RETREG3-201ENST00000309428 PDE4DQ08499 809 aa14.12□□□□□ -0.15
RETREG3-201ENST00000309428 SPICE1Q8N0Z3 855 aa14.12□□□□□ -0.15
RETREG3-201ENST00000309428 JAKMIP2Q96AA8 810 aa14.12□□□□□ -0.15
RETREG3-201ENST00000309428 TMEM60Q9H2L4 133 aa14.12□□□□□ -0.15
RETREG3-201ENST00000309428 DBNDD1Q9H9R9 158 aa14.12□□□□□ -0.15
RETREG3-201ENST00000309428 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
RETREG3-201ENST00000309428 TCP11L1Q9NUJ3 509 aa14.12□□□□□ -0.15
RETREG3-201ENST00000309428 TTF2Q9UNY4 1162 aaKnown RBP14.12□□□□□ -0.15
RETREG3-201ENST00000309428 SAR1BQ9Y6B6 198 aa14.12□□□□□ -0.15
RETREG3-201ENST00000309428 BCL9O00512 1426 aa14.12□□□□□ -0.15
RETREG3-201ENST00000309428 SPATA31A1Q5TZJ5 1347 aa14.12□□□□□ -0.15
RETREG3-201ENST00000309428 SMCO2A6NFE2 343 aa14.12□□□□□ -0.15
RETREG3-201ENST00000309428 ZNF384Q8TF68 577 aa14.12□□□□□ -0.15
RETREG3-201ENST00000309428 TAF4BQ92750 862 aa14.12□□□□□ -0.15
RETREG3-201ENST00000309428 MCM3P25205 808 aa14.12□□□□□ -0.15
RETREG3-201ENST00000309428 IFFO1Q0D2I5 559 aa14.12□□□□□ -0.15
RETREG3-201ENST00000309428 SLC30A10Q6XR72 485 aa14.12□□□□□ -0.15
RETREG3-201ENST00000309428 SRLQ86TD4 932 aa14.12□□□□□ -0.15
RETREG3-201ENST00000309428 RIOK1Q9BRS2 568 aaKnown RBP14.12□□□□□ -0.15
RETREG3-201ENST00000309428 FOXP1Q9H334 677 aaPredicted RBP14.12□□□□□ -0.15
RETREG3-201ENST00000309428 FAM205AQ6ZU69 1335 aa14.11□□□□□ -0.15
RETREG3-201ENST00000309428 TLDC2A0PJX2 215 aa14.11□□□□□ -0.15
RETREG3-201ENST00000309428 CYP26C1Q6V0L0 522 aa14.11□□□□□ -0.15
RETREG3-201ENST00000309428 DPP8Q6V1X1 898 aaPredicted RBP14.11□□□□□ -0.15
RETREG3-201ENST00000309428 GBP6Q6ZN66 633 aa14.11□□□□□ -0.15
RETREG3-201ENST00000309428 TMTC3Q6ZXV5 915 aa14.11□□□□□ -0.15
RETREG3-201ENST00000309428 CCDC114Q96M63 670 aa14.11□□□□□ -0.15
RETREG3-201ENST00000309428 L2HGDHQ9H9P8 463 aa14.11□□□□□ -0.15
RETREG3-201ENST00000309428 PPANQ9NQ55 473 aaKnown RBP14.11□□□□□ -0.15
RETREG3-201ENST00000309428 SRPRBQ9Y5M8 271 aaKnown RBP14.11□□□□□ -0.15
RETREG3-201ENST00000309428 RFX7Q2KHR2 1363 aa14.11□□□□□ -0.15
RETREG3-201ENST00000309428 ABL1P00519 1130 aa14.11□□□□□ -0.15
RETREG3-201ENST00000309428 PDE6BP35913 854 aa14.11□□□□□ -0.15
RETREG3-201ENST00000309428 CEP89Q96ST8 783 aa14.11□□□□□ -0.15
RETREG3-201ENST00000309428 RNF26Q9BY78 433 aaPredicted RBP14.11□□□□□ -0.15
RETREG3-201ENST00000309428 CKAP4Q07065 602 aaKnown RBP14.11□□□□□ -0.15
RETREG3-201ENST00000309428 TROAPQ12815 778 aa14.11□□□□□ -0.15
RETREG3-201ENST00000309428 PKN1Q16512 942 aa14.11□□□□□ -0.15
RETREG3-201ENST00000309428 TMTC1Q8IUR5 882 aa14.11□□□□□ -0.15
RETREG3-201ENST00000309428 KSR1Q8IVT5 923 aa14.11□□□□□ -0.15
RETREG3-201ENST00000309428 NOA1Q8NC60 698 aaKnown RBP14.11□□□□□ -0.15
RETREG3-201ENST00000309428 MRFAP1Q9Y605 127 aa14.11□□□□□ -0.15
RETREG3-201ENST00000309428 B4DLN1 442 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms