RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 FBXO40Q9UH90 709 aa12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 CCPG1Q9ULG6 757 aa12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 NAP1L2Q9ULW6 460 aaPredicted RBP12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 HPS5Q9UPZ3 1129 aa12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 CYP46A1Q9Y6A2 500 aa12.81□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 KLRF2D3W0D1 207 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 STRNO43815 780 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ICAM1P05362 532 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ALAS1P13196 640 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 CPA1P15085 419 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 CYP2B6P20813 491 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 PTPREP23469 700 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 GRK4P32298 578 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 GNAQP50148 359 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 SNAP25P60880 206 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 EXOSC10Q01780 885 aaKnown RBP12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 TROAPQ12815 778 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 MAP2K5Q13163 448 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 IRF5Q13568 498 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 GRB14Q14449 540 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 KCTD2Q14681 263 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 CDC37Q16543 378 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 Q6ZUG5 572 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 RUFY3Q7L099 469 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 DPP9Q86TI2 863 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 SGMS1Q86VZ5 419 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 CHST13Q8NET6 341 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 MYL10Q9BUA6 226 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 TM6SF1Q9BZW5 370 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ACAD9Q9H845 621 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 GPHNQ9NQX3 736 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 HOMER2Q9NSB8 354 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 BIN2Q9UBW5 565 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 MAD2L2Q9UI95 211 aa12.8□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 KLF18A0A0U1RQI7 1052 aa12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 PALM3A6NDB9 673 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ZBTB43O43298 467 aa12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ADCY3O60266 1144 aa12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ADORA2AP29274 412 aa12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 UBXN2AP68543 259 aa12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 COL9A3Q14050 684 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 APOA5Q6Q788 366 aa12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 TRMT44Q8IYL2 757 aaKnown RBP12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ADGRF4Q8IZF3 695 aa12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ABRAQ8N0Z2 381 aa12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 STAG2Q8N3U4 1231 aa12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 PXYLP1Q8TE99 480 aa12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ABHD8Q96I13 439 aa12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 AGBL1Q96MI9 1066 aa12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 CPVLQ9H3G5 476 aa12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 RNF146Q9NTX7 359 aa12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 RBM28Q9NW13 759 aaKnown RBP12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 MCM3APO60318 1980 aa12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ZNF536O15090 1300 aa12.79□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 LCTP09848 1927 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 GOLGA8AA7E2F4 631 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 GOLGA8BA8MQT2 603 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 SEC24BO95487 1268 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 XRCC5P13010 732 aaKnown RBP12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 RXRAP19793 462 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 USH1GQ495M9 461 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 MORN1Q5T089 497 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 RAB11FIP4Q86YS3 637 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 CCDC144CPQ8IYA2 1237 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ANKRD35Q8N283 1001 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 SH3TC2Q8TF17 1288 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 BRF1Q92994 677 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 DDX11Q96FC9 970 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 TRERF1Q96PN7 1200 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 LZTS2Q9BRK4 669 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 UPF3BQ9BZI7 483 aaKnown RBP12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 VAT1LQ9HCJ6 419 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 GJD2Q9UKL4 321 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 FRMPD3Q5JV73 1810 aa12.78□□□□□ -0.36
CSPG4P2Y-201ENST00000306853 HMGCRP04035 888 aa12.77□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 ELNP15502 786 aa12.77□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 RCAN1P53805 252 aa12.77□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 APOBRQ0VD83 1088 aa12.77□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 TRAF1Q13077 416 aa12.77□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 RTN1Q16799 776 aa12.77□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 QRICH1Q2TAL8 776 aa12.77□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 FBXO11Q86XK2 927 aa12.77□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 HOMER1Q86YM7 354 aa12.77□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 PDRG1Q9NUG6 133 aa12.77□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 SEC63Q9UGP8 760 aaKnown RBP12.77□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 RIPK3Q9Y572 518 aa12.77□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 PFASO15067 1338 aa12.77□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 ABCB11O95342 1321 aa12.77□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 CCDC196A0A1B0GTZ2 297 aa12.76□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 CCDC85CA6NKD9 419 aa12.76□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 METAP2P50579 478 aaKnown RBP eCLIP12.76□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 MFSD14CQ5VZR4 134 aa12.76□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 FBXL16Q8N461 479 aa12.76□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 FANCBQ8NB91 859 aa12.76□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 USP6NLQ92738 828 aa12.76□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 ARMC5Q96C12 935 aa12.76□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 SPZ1Q9BXG8 430 aa12.76□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 AMNQ9BXJ7 453 aa12.76□□□□□ -0.37
CSPG4P2Y-201ENST00000306853 JMJD4Q9H9V9 463 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms