RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 IVNS1ABPQ9Y6Y0 642 aa13.28□□□□□ -0.28
CLCC1-201ENST00000302500 LTBP2Q14767 1821 aa13.28□□□□□ -0.28
CLCC1-201ENST00000302500 SNAI1O95863 264 aaPredicted RBP13.27□□□□□ -0.29
CLCC1-201ENST00000302500 PLS1Q14651 629 aa13.27□□□□□ -0.29
CLCC1-201ENST00000302500 NECTIN1Q15223 517 aa13.27□□□□□ -0.29
CLCC1-201ENST00000302500 RRP12Q5JTH9 1297 aaKnown RBP13.27□□□□□ -0.29
CLCC1-201ENST00000302500 MB21D2Q8IYB1 491 aaPredicted RBP13.27□□□□□ -0.29
CLCC1-201ENST00000302500 CHST13Q8NET6 341 aa13.27□□□□□ -0.29
CLCC1-201ENST00000302500 PAWRQ96IZ0 340 aaKnown RBP13.27□□□□□ -0.29
CLCC1-201ENST00000302500 ZSCAN10Q96SZ4 725 aaPredicted RBP13.27□□□□□ -0.29
CLCC1-201ENST00000302500 MMP19Q99542 508 aa13.27□□□□□ -0.29
CLCC1-201ENST00000302500 TINF2Q9BSI4 451 aa13.27□□□□□ -0.29
CLCC1-201ENST00000302500 ESYT1Q9BSJ8 1104 aa13.27□□□□□ -0.29
CLCC1-201ENST00000302500 SENP2Q9HC62 589 aa13.27□□□□□ -0.29
CLCC1-201ENST00000302500 A1CFQ9NQ94 594 aaKnown RBP13.27□□□□□ -0.29
CLCC1-201ENST00000302500 DDX20Q9UHI6 824 aaKnown RBP13.27□□□□□ -0.29
CLCC1-201ENST00000302500 SLC16A2P36021 539 aa13.26□□□□□ -0.29
CLCC1-201ENST00000302500 SNAP25P60880 206 aa13.26□□□□□ -0.29
CLCC1-201ENST00000302500 IMMTQ16891 758 aaKnown RBP13.26□□□□□ -0.29
CLCC1-201ENST00000302500 MUM1L1Q5H9M0 696 aa13.26□□□□□ -0.29
CLCC1-201ENST00000302500 PRAMEF19Q5SWL8 479 aa13.26□□□□□ -0.29
CLCC1-201ENST00000302500 WDR78Q5VTH9 848 aa13.26□□□□□ -0.29
CLCC1-201ENST00000302500 MSL3Q8N5Y2 521 aaKnown RBP13.26□□□□□ -0.29
CLCC1-201ENST00000302500 MORC4Q8TE76 937 aa13.26□□□□□ -0.29
CLCC1-201ENST00000302500 CHURC1Q8WUH1 139 aa13.26□□□□□ -0.29
CLCC1-201ENST00000302500 CLEC4DQ8WXI8 215 aa13.26□□□□□ -0.29
CLCC1-201ENST00000302500 NRBP1Q9UHY1 535 aa13.26□□□□□ -0.29
CLCC1-201ENST00000302500 CTNNA3Q9UI47 895 aa13.26□□□□□ -0.29
CLCC1-201ENST00000302500 TNKSO95271 1327 aa13.26□□□□□ -0.29
CLCC1-201ENST00000302500 BAZ2BQ9UIF8 2168 aaKnown RBP13.26□□□□□ -0.29
CLCC1-201ENST00000302500 SOWAHBA6NEL2 793 aa13.25□□□□□ -0.29
CLCC1-201ENST00000302500 E7EWF7 191 aa13.25□□□□□ -0.29
CLCC1-201ENST00000302500 SEPT4O43236 478 aa13.25□□□□□ -0.29
CLCC1-201ENST00000302500 RAD21O60216 631 aa13.25□□□□□ -0.29
CLCC1-201ENST00000302500 ZBED4O75132 1171 aa13.25□□□□□ -0.29
CLCC1-201ENST00000302500 ICAM1P05362 532 aa13.25□□□□□ -0.29
CLCC1-201ENST00000302500 SYDE2Q5VT97 1194 aa13.25□□□□□ -0.29
CLCC1-201ENST00000302500 MFSD14CQ5VZR4 134 aa13.25□□□□□ -0.29
CLCC1-201ENST00000302500 DPP9Q86TI2 863 aa13.25□□□□□ -0.29
CLCC1-201ENST00000302500 CPXCR1Q8N123 301 aa13.25□□□□□ -0.29
CLCC1-201ENST00000302500 PNMA1Q8ND90 353 aa13.25□□□□□ -0.29
CLCC1-201ENST00000302500 WDR19Q8NEZ3 1342 aa13.25□□□□□ -0.29
CLCC1-201ENST00000302500 MTMR8Q96EF0 704 aa13.25□□□□□ -0.29
CLCC1-201ENST00000302500 SYNGAP1Q96PV0 1343 aa13.25□□□□□ -0.29
CLCC1-201ENST00000302500 CPVLQ9H3G5 476 aa13.25□□□□□ -0.29
CLCC1-201ENST00000302500 RBM8AQ9Y5S9 174 aaKnown RBP13.25□□□□□ -0.29
CLCC1-201ENST00000302500 FRMPD2Q68DX3 1309 aaPredicted RBP13.24□□□□□ -0.29
CLCC1-201ENST00000302500 OPLAHO14841 1288 aa13.24□□□□□ -0.29
CLCC1-201ENST00000302500 CTAGE5O15320 804 aa13.24□□□□□ -0.29
CLCC1-201ENST00000302500 NKX3-2P78367 333 aa13.24□□□□□ -0.29
CLCC1-201ENST00000302500 CNTN2Q02246 1040 aa13.24□□□□□ -0.29
CLCC1-201ENST00000302500 TROAPQ12815 778 aa13.24□□□□□ -0.29
CLCC1-201ENST00000302500 KCTD2Q14681 263 aa13.24□□□□□ -0.29
CLCC1-201ENST00000302500 CCSAPQ6IQ19 270 aaPredicted RBP13.24□□□□□ -0.29
CLCC1-201ENST00000302500 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
CLCC1-201ENST00000302500 CCAR1Q8IX12 1150 aaKnown RBP13.24□□□□□ -0.29
CLCC1-201ENST00000302500 IGDCC4Q8TDY8 1250 aa13.24□□□□□ -0.29
CLCC1-201ENST00000302500 CNNM2Q9H8M5 875 aa13.24□□□□□ -0.29
CLCC1-201ENST00000302500 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
CLCC1-201ENST00000302500 KIAA1217Q5T5P2 1943 aa13.23□□□□□ -0.29
CLCC1-201ENST00000302500 H0YGN5 161 aa13.23□□□□□ -0.29
CLCC1-201ENST00000302500 ADAMTS4O75173 837 aa13.23□□□□□ -0.29
CLCC1-201ENST00000302500 TFRCP02786 760 aaKnown RBP13.23□□□□□ -0.29
CLCC1-201ENST00000302500 GHRHRQ02643 423 aa13.23□□□□□ -0.29
CLCC1-201ENST00000302500 SNX17Q15036 470 aa13.23□□□□□ -0.29
CLCC1-201ENST00000302500 TKFCQ3LXA3 575 aa13.23□□□□□ -0.29
CLCC1-201ENST00000302500 STAG2Q8N3U4 1231 aa13.23□□□□□ -0.29
CLCC1-201ENST00000302500 RUFY2Q8WXA3 655 aa13.23□□□□□ -0.29
CLCC1-201ENST00000302500 CHMP4CQ96CF2 233 aa13.23□□□□□ -0.29
CLCC1-201ENST00000302500 KRT23Q9C075 422 aa13.23□□□□□ -0.29
CLCC1-201ENST00000302500 ACAD9Q9H845 621 aa13.23□□□□□ -0.29
CLCC1-201ENST00000302500 TOMM22Q9NS69 142 aa13.23□□□□□ -0.29
CLCC1-201ENST00000302500 RNF146Q9NTX7 359 aa13.23□□□□□ -0.29
CLCC1-201ENST00000302500 CYP39A1Q9NYL5 469 aa13.23□□□□□ -0.29
CLCC1-201ENST00000302500 FBXO40Q9UH90 709 aa13.23□□□□□ -0.29
CLCC1-201ENST00000302500 MAD2L2Q9UI95 211 aa13.23□□□□□ -0.29
CLCC1-201ENST00000302500 PALM3A6NDB9 673 aaPredicted RBP13.22□□□□□ -0.29
CLCC1-201ENST00000302500 NFIBO00712 420 aa13.22□□□□□ -0.29
CLCC1-201ENST00000302500 MSCO60682 206 aa13.22□□□□□ -0.29
CLCC1-201ENST00000302500 PPP1R11O60927 126 aaPredicted RBP13.22□□□□□ -0.29
CLCC1-201ENST00000302500 GOLGA8HP0CJ92 632 aa13.22□□□□□ -0.29
CLCC1-201ENST00000302500 GPATCH4Q5T3I0 446 aaKnown RBP13.22□□□□□ -0.29
CLCC1-201ENST00000302500 NECAB2Q7Z6G3 386 aa13.22□□□□□ -0.29
CLCC1-201ENST00000302500 IQCA1Q86XH1 822 aa13.22□□□□□ -0.29
CLCC1-201ENST00000302500 KCNB2Q92953 911 aa13.22□□□□□ -0.29
CLCC1-201ENST00000302500 LENG1Q96BZ8 264 aaPredicted RBP13.22□□□□□ -0.29
CLCC1-201ENST00000302500 TRERF1Q96PN7 1200 aa13.22□□□□□ -0.29
CLCC1-201ENST00000302500 PURBQ96QR8 312 aaKnown RBP13.22□□□□□ -0.29
CLCC1-201ENST00000302500 DDX49Q9Y6V7 483 aaKnown RBP13.22□□□□□ -0.29
CLCC1-201ENST00000302500 DNM1LO00429 736 aa13.21□□□□□ -0.29
CLCC1-201ENST00000302500 SLC27A2O14975 620 aa13.21□□□□□ -0.29
CLCC1-201ENST00000302500 CYTH3O43739 400 aa13.21□□□□□ -0.29
CLCC1-201ENST00000302500 EDNRBP24530 442 aa13.21□□□□□ -0.29
CLCC1-201ENST00000302500 CCDC178Q5BJE1 867 aa13.21□□□□□ -0.29
CLCC1-201ENST00000302500 KLHDC9Q8NEP7 349 aa13.21□□□□□ -0.29
CLCC1-201ENST00000302500 JMJD4Q9H9V9 463 aa13.21□□□□□ -0.29
CLCC1-201ENST00000302500 GPCPD1Q9NPB8 672 aa13.21□□□□□ -0.29
CLCC1-201ENST00000302500 GPHNQ9NQX3 736 aaPredicted RBP13.21□□□□□ -0.29
CLCC1-201ENST00000302500 ATXN8OSP0DMR3 200 aa13.2□□□□□ -0.3
CLCC1-201ENST00000302500 IRX5P78411 483 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms