RNA–Protein interactions for RNA: ENST00000301050.6

CACNB3-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB3, Length 2,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-201ENST00000301050 YTHDF3Q7Z739 585 aaKnown RBP17.72■□□□□ 0.43
CACNB3-201ENST00000301050 LCORLQ8N3X6 602 aa17.72■□□□□ 0.43
CACNB3-201ENST00000301050 MIGA1Q8NAN2 632 aa17.72■□□□□ 0.43
CACNB3-201ENST00000301050 SPATA20Q8TB22 786 aa17.72■□□□□ 0.43
CACNB3-201ENST00000301050 TBC1D22AQ8WUA7 517 aa17.72■□□□□ 0.43
CACNB3-201ENST00000301050 EPN1Q9Y6I3 576 aaPredicted RBP17.72■□□□□ 0.43
CACNB3-201ENST00000301050 COL1A1P02452 1464 aaPredicted RBP17.72■□□□□ 0.43
CACNB3-201ENST00000301050 RASSF9O75901 435 aa17.72■□□□□ 0.43
CACNB3-201ENST00000301050 NEBLO76041 1014 aa17.72■□□□□ 0.43
CACNB3-201ENST00000301050 CCT6AP40227 531 aaKnown RBP17.72■□□□□ 0.43
CACNB3-201ENST00000301050 CUL4BQ13620 913 aa17.72■□□□□ 0.43
CACNB3-201ENST00000301050 CCDC40Q4G0X9 1142 aa17.72■□□□□ 0.43
CACNB3-201ENST00000301050 CYB5R4Q7L1T6 521 aa17.72■□□□□ 0.43
CACNB3-201ENST00000301050 JAKMIP2Q96AA8 810 aa17.72■□□□□ 0.43
CACNB3-201ENST00000301050 NLRP3Q96P20 1036 aa17.72■□□□□ 0.43
CACNB3-201ENST00000301050 NUP88Q99567 741 aaPredicted RBP17.72■□□□□ 0.43
CACNB3-201ENST00000301050 VCPKMTQ9H867 229 aa17.72■□□□□ 0.43
CACNB3-201ENST00000301050 ABCF2Q9UG63 623 aa17.72■□□□□ 0.43
CACNB3-201ENST00000301050 TFR2Q9UP52 801 aa17.72■□□□□ 0.43
CACNB3-201ENST00000301050 C4BP0C0L5 1744 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 A6NNZ2 444 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 NDUFA10O95299 355 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 EPB41P11171 864 aaKnown RBP17.71■□□□□ 0.43
CACNB3-201ENST00000301050 KLRK1P26718 216 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 NAP1L1P55209 391 aaKnown RBP17.71■□□□□ 0.43
CACNB3-201ENST00000301050 TUBB8Q3ZCM7 444 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 TEX11Q8IYF3 940 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 IFNL3Q8IZI9 196 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 CAGE1Q8TC20 777 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 HAUS4Q9H6D7 363 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 BCCIPQ9P287 314 aaKnown RBP eCLIP17.71■□□□□ 0.43
CACNB3-201ENST00000301050 C4AP0C0L4 1744 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 ZNF185O15231 689 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 ACTN4O43707 911 aaKnown RBP17.71■□□□□ 0.43
CACNB3-201ENST00000301050 ECM2O94769 699 aaPredicted RBP17.71■□□□□ 0.43
CACNB3-201ENST00000301050 CTDSPL2Q05D32 466 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 C2orf54Q08AI8 447 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 SF3B2Q13435 895 aaKnown RBP17.71■□□□□ 0.43
CACNB3-201ENST00000301050 CEP85LQ5SZL2 805 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 RNF187Q5TA31 235 aaPredicted RBP17.71■□□□□ 0.43
CACNB3-201ENST00000301050 FAM196AQ6ZSG2 479 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 MICALCLQ6ZW33 695 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 PAGR1Q9BTK6 254 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 CENPHQ9H3R5 247 aa17.71■□□□□ 0.43
CACNB3-201ENST00000301050 FBXO2Q9UK22 296 aaPredicted RBP17.71■□□□□ 0.43
CACNB3-201ENST00000301050 B4E1Z4 1266 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 PATL2C9JE40 543 aaKnown RBP17.7■□□□□ 0.42
CACNB3-201ENST00000301050 ZEB2O60315 1214 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 KRT9P35527 623 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 ATP1A2P50993 1020 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 MRPL12P52815 198 aaKnown RBP17.7■□□□□ 0.42
CACNB3-201ENST00000301050 NAA35Q5VZE5 725 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 PHKBQ93100 1093 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 NAPBQ9H115 298 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 ZNF804BA4D1E1 1349 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 TMCO5BA8MYB1 307 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 SEMA3EO15041 775 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 RGL2O15211 777 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 PTPREP23469 700 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 RFC4P35249 363 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 UBE4AQ14139 1066 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 TPTE2Q6XPS3 522 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 ADGRA1Q86SQ6 560 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 CCDC13Q8IYE1 715 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 LRRC4BQ9NT99 713 aa17.7■□□□□ 0.42
CACNB3-201ENST00000301050 GSG1L2A8MUP6 293 aa17.69■□□□□ 0.42
CACNB3-201ENST00000301050 RPS8P62241 208 aaKnown RBP17.69■□□□□ 0.42
CACNB3-201ENST00000301050 SLC51AQ86UW1 340 aa17.69■□□□□ 0.42
CACNB3-201ENST00000301050 SH2D3CQ8N5H7 860 aa17.69■□□□□ 0.42
CACNB3-201ENST00000301050 TSEN2Q8NCE0 465 aaKnown RBP17.69■□□□□ 0.42
CACNB3-201ENST00000301050 SGSM3Q96HU1 749 aa17.69■□□□□ 0.42
CACNB3-201ENST00000301050 SLC24A3Q9HC58 644 aa17.69■□□□□ 0.42
CACNB3-201ENST00000301050 SLC40A1Q9NP59 571 aa17.69■□□□□ 0.42
CACNB3-201ENST00000301050 TACC3Q9Y6A5 838 aa17.69■□□□□ 0.42
CACNB3-201ENST00000301050 SLC4A4Q9Y6R1 1079 aa17.69■□□□□ 0.42
CACNB3-201ENST00000301050 RXRAP19793 462 aa17.69■□□□□ 0.42
CACNB3-201ENST00000301050 CYP7A1P22680 504 aa17.69■□□□□ 0.42
CACNB3-201ENST00000301050 EZH2Q15910 746 aaKnown RBP17.69■□□□□ 0.42
CACNB3-201ENST00000301050 CCDC122Q5T0U0 273 aa17.69■□□□□ 0.42
CACNB3-201ENST00000301050 TRAPPC3LQ5T215 181 aa17.69■□□□□ 0.42
CACNB3-201ENST00000301050 HDAC7Q8WUI4 952 aa17.69■□□□□ 0.42
CACNB3-201ENST00000301050 POLD4Q9HCU8 107 aa17.69■□□□□ 0.42
CACNB3-201ENST00000301050 TRPC5Q9UL62 973 aaPredicted RBP17.69■□□□□ 0.42
CACNB3-201ENST00000301050 TNRC6CQ9HCJ0 1690 aaKnown RBP17.69■□□□□ 0.42
CACNB3-201ENST00000301050 N4BP3O15049 544 aa17.68■□□□□ 0.42
CACNB3-201ENST00000301050 LSP1P33241 339 aa17.68■□□□□ 0.42
CACNB3-201ENST00000301050 HERVK_113P62684 666 aa17.68■□□□□ 0.42
CACNB3-201ENST00000301050 CRYMQ14894 314 aa17.68■□□□□ 0.42
CACNB3-201ENST00000301050 KRT31Q15323 416 aa17.68■□□□□ 0.42
CACNB3-201ENST00000301050 KANK3Q6NY19 840 aa17.68■□□□□ 0.42
CACNB3-201ENST00000301050 USP49Q70CQ1 688 aa17.68■□□□□ 0.42
CACNB3-201ENST00000301050 SMYD4Q8IYR2 804 aaPredicted RBP17.68■□□□□ 0.42
CACNB3-201ENST00000301050 FAM84BQ96KN1 310 aaPredicted RBP17.68■□□□□ 0.42
CACNB3-201ENST00000301050 SENP2Q9HC62 589 aa17.68■□□□□ 0.42
CACNB3-201ENST00000301050 DDX20Q9UHI6 824 aaKnown RBP17.68■□□□□ 0.42
CACNB3-201ENST00000301050 PLCB4Q15147 1175 aa17.68■□□□□ 0.42
CACNB3-201ENST00000301050 CAVIN4Q5BKX8 364 aa17.68■□□□□ 0.42
CACNB3-201ENST00000301050 NAIF1Q69YI7 327 aaPredicted RBP17.68■□□□□ 0.42
CACNB3-201ENST00000301050 ZNF473Q8WTR7 871 aaKnown RBP17.68■□□□□ 0.42
CACNB3-201ENST00000301050 EPN3Q9H201 632 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms