RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 PARP3Q9Y6F1 533 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 VWDEQ8N2E2 1590 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 PLCG1P19174 1290 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 GUCY2DQ02846 1103 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 UBE4AQ14139 1066 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 NCAPHQ15003 741 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 STAG2Q8N3U4 1231 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 ISCA1Q9BUE6 129 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 H7C1D1 291 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 OPA1O60313 960 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 MAP2K1Q02750 393 aaPredicted RBP14.79□□□□□ -0.04
CASC4-201ENST00000299957 MECOMQ03112 1051 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 KIAA0753Q2KHM9 967 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 CNNM4Q6P4Q7 775 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 NOA1Q8NC60 698 aaKnown RBP14.79□□□□□ -0.04
CASC4-201ENST00000299957 SCLT1Q96NL6 688 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 ALDH8A1Q9H2A2 487 aaPredicted RBP14.79□□□□□ -0.04
CASC4-201ENST00000299957 PXDNQ92626 1479 aa14.79□□□□□ -0.04
CASC4-201ENST00000299957 GTF2IP78347 998 aa14.78□□□□□ -0.04
CASC4-201ENST00000299957 RRP15Q9Y3B9 282 aaKnown RBP14.78□□□□□ -0.04
CASC4-201ENST00000299957 KCNK3O14649 394 aa14.78□□□□□ -0.04
CASC4-201ENST00000299957 NCK2O43639 380 aa14.78□□□□□ -0.04
CASC4-201ENST00000299957 ZC3H12CQ9C0D7 883 aaKnown RBP14.78□□□□□ -0.04
CASC4-201ENST00000299957 DPH5Q9H2P9 285 aa14.78□□□□□ -0.04
CASC4-201ENST00000299957 HAUS4Q9H6D7 363 aa14.78□□□□□ -0.04
CASC4-201ENST00000299957 NPHP4O75161 1426 aaPredicted RBP14.78□□□□□ -0.04
CASC4-201ENST00000299957 DNM2P50570 870 aa14.78□□□□□ -0.04
CASC4-201ENST00000299957 ARHGAP44Q17R89 818 aa14.78□□□□□ -0.04
CASC4-201ENST00000299957 WHAMMP3Q1A5X7 153 aa14.78□□□□□ -0.04
CASC4-201ENST00000299957 MFSD14BQ5SR56 506 aa14.78□□□□□ -0.04
CASC4-201ENST00000299957 CPLX4Q7Z7G2 160 aa14.78□□□□□ -0.04
CASC4-201ENST00000299957 GJA10Q969M2 543 aa14.78□□□□□ -0.04
CASC4-201ENST00000299957 LSM14BQ9BX40 385 aaKnown RBP14.78□□□□□ -0.04
CASC4-201ENST00000299957 MLXIPQ9HAP2 919 aa14.78□□□□□ -0.04
CASC4-201ENST00000299957 TCP11X2Q5H9J9 407 aa14.77□□□□□ -0.04
CASC4-201ENST00000299957 NOX5Q96PH1 765 aa14.77□□□□□ -0.04
CASC4-201ENST00000299957 PPLO60437 1756 aa14.77□□□□□ -0.04
CASC4-201ENST00000299957 MEIS1O00470 390 aa14.77□□□□□ -0.04
CASC4-201ENST00000299957 OR52Z1P0C646 297 aa14.77□□□□□ -0.04
CASC4-201ENST00000299957 SNAP25P60880 206 aa14.77□□□□□ -0.04
CASC4-201ENST00000299957 TRIM14Q14142 442 aa14.77□□□□□ -0.04
CASC4-201ENST00000299957 TMC4Q7Z404 712 aa14.77□□□□□ -0.04
CASC4-201ENST00000299957 ZNF804AQ7Z570 1209 aa14.77□□□□□ -0.04
CASC4-201ENST00000299957 CLEC10AQ8IUN9 316 aa14.77□□□□□ -0.04
CASC4-201ENST00000299957 TBCKQ8TEA7 893 aa14.77□□□□□ -0.04
CASC4-201ENST00000299957 PIGSQ96S52 555 aa14.77□□□□□ -0.04
CASC4-201ENST00000299957 CARD10Q9BWT7 1032 aa14.77□□□□□ -0.04
CASC4-201ENST00000299957 ABHD10Q9NUJ1 306 aa14.77□□□□□ -0.04
CASC4-201ENST00000299957 PACSIN2Q9UNF0 486 aaPredicted RBP14.77□□□□□ -0.04
CASC4-201ENST00000299957 BUB1BO60566 1050 aaPredicted RBP14.77□□□□□ -0.05
CASC4-201ENST00000299957 SLC9C1Q4G0N8 1177 aa14.77□□□□□ -0.05
CASC4-201ENST00000299957 REXO1L1PQ8IX06 675 aa14.77□□□□□ -0.05
CASC4-201ENST00000299957 KCNQ2O43526 872 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 FCER1AP12319 257 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 EIF4A3P38919 411 aaKnown RBP14.76□□□□□ -0.05
CASC4-201ENST00000299957 PLA2G4AP47712 749 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 KLK7P49862 253 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 UBE2SQ16763 222 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 RBM43Q6ZSC3 357 aaKnown RBP14.76□□□□□ -0.05
CASC4-201ENST00000299957 CD44P16070 742 aaKnown RBP14.76□□□□□ -0.05
CASC4-201ENST00000299957 ACTN2P35609 894 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 UBXN2AP68543 259 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 CEP85LQ5SZL2 805 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 KRT12Q99456 494 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 NHEJ1Q9H9Q4 299 aaPredicted RBP14.76□□□□□ -0.05
CASC4-201ENST00000299957 AGPAT5Q9NUQ2 364 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 MRFAP1Q9Y605 127 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 POTEMA6NI47 508 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 SPDYE3A6NKU9 549 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 HLA-DOAP06340 250 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 SRBD1Q8N5C6 995 aaKnown RBP14.76□□□□□ -0.05
CASC4-201ENST00000299957 CNBD1Q8NA66 436 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 GIMAP7Q8NHV1 300 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 CCDC114Q96M63 670 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 DLC1Q96QB1 1528 aa14.76□□□□□ -0.05
CASC4-201ENST00000299957 ATP1A1P05023 1023 aaKnown RBP14.75□□□□□ -0.05
CASC4-201ENST00000299957 TOB1P50616 345 aaPredicted RBP14.75□□□□□ -0.05
CASC4-201ENST00000299957 GSTO1P78417 241 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 EARS2Q5JPH6 523 aaKnown RBP14.75□□□□□ -0.05
CASC4-201ENST00000299957 DAAM2Q86T65 1068 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 CCNL1Q9UK58 526 aaPredicted RBP14.75□□□□□ -0.05
CASC4-201ENST00000299957 FAM196BA6NMK8 535 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 PTPAQ15257 358 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 DOK7Q18PE1 504 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 CUL5Q93034 780 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 ADAMTS1Q9UHI8 967 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 TUBE1Q9UJT0 475 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 ANKARQ7Z5J8 1434 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 E7EVH7 732 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 MYO1CO00159 1063 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 INPP5BP32019 993 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 DPP8Q6V1X1 898 aaPredicted RBP14.75□□□□□ -0.05
CASC4-201ENST00000299957 KCTD1Q719H9 257 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 BRINP3Q76B58 766 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 ZNF658Q5TYW1 1059 aaPredicted RBP14.75□□□□□ -0.05
CASC4-201ENST00000299957 NEK8Q86SG6 692 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 SPICE1Q8N0Z3 855 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 EPB41L5Q9HCM4 733 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 EHD2Q9NZN4 543 aa14.75□□□□□ -0.05
CASC4-201ENST00000299957 BCS1LQ9Y276 419 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms