RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 ABHD10Q9NUJ1 306 aa11.27□□□□□ -0.61
TNFRSF11B-201ENST00000297350 SRP68Q9UHB9 627 aaKnown RBP11.27□□□□□ -0.61
TNFRSF11B-201ENST00000297350 GPR75-ASB3A0A0A6YYF3 556 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 LGALS16A8MUM7 142 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 IL1R1P14778 569 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 RASA1P20936 1047 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 RFC4P35249 363 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 STX17P56962 302 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 GOLGA8FQ08AF8 430 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 GOLGA8DPQ0D2H9 430 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 NONOQ15233 471 aaKnown RBP eCLIP11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 ZNF662Q6ZS27 426 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CNBD1Q8NA66 436 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 GIMAP8Q8ND71 665 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 ARHGEF1Q92888 912 aaKnown RBP11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 NUP58Q9BVL2 599 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 MAGEC2Q9UBF1 373 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 PRDM4Q9UKN5 801 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 SNED1Q8TER0 1413 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 FAM205AQ6ZU69 1335 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 A0A0U1RQG5 324 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 SOWAHDA6NJG2 315 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 NPHP1O15259 732 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 PARP1P09874 1014 aaKnown RBP11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CASP14P31944 242 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 KCNQ4P56696 695 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 BRD3Q15059 726 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 NOM1Q5C9Z4 860 aaKnown RBP11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 TRAPPC3LQ5T215 181 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 FOXR2Q6PJQ5 311 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 RAD9BQ6WBX8 426 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 KRT27Q7Z3Y8 459 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 MSL3Q8N5Y2 521 aaKnown RBP11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 EHBP1Q8NDI1 1231 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 RRP36Q96EU6 259 aaKnown RBP11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 MTRQ99707 1265 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 TMEM47Q9BQJ4 181 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 RTFDC1Q9BY42 306 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 ZNF446Q9NWS9 450 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 SEC63Q9UGP8 760 aaKnown RBP11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CDC23Q9UJX2 597 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 SUGT1Q9Y2Z0 365 aa11.26□□□□□ -0.61
TNFRSF11B-201ENST00000297350 MYO3BQ8WXR4 1341 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CTAGE9A4FU28 777 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 FANCGO15287 622 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 OR52Z1P0C646 297 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 DNM2P50570 870 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 WHAMMP3Q1A5X7 153 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 TSR1Q2NL82 804 aaKnown RBP11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 FAM182BQ5T319 152 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 PPP1R18Q6NYC8 613 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 HEATR3Q7Z4Q2 680 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 SRGAP1Q7Z6B7 1085 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 RASSF8Q8NHQ8 419 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 MRPL44Q9H9J2 332 aaKnown RBP11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 FHOD1Q9Y613 1164 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 GAKO14976 1311 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 QSER1Q2KHR3 1735 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CCDC151A5D8V7 595 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 PNMA6AP0CW24 399 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 PRCPP42785 496 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CRY2Q49AN0 593 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 SOGA3Q5TF21 947 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 TAF3Q5VWG9 929 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 TXNRD3Q86VQ6 643 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 AMIGO3Q86WK7 504 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 SMYD4Q8IYR2 804 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 RPGRQ92834 1020 aaKnown RBP11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 GPKOWQ92917 476 aaPredicted RBP eCLIP11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 DNAJC7Q99615 494 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 C7orf25Q9BPX7 421 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 LRRC27Q9C0I9 530 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 BLZF1Q9H2G9 400 aa11.25□□□□□ -0.61
TNFRSF11B-201ENST00000297350 ABCB11O95342 1321 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 KLRF2D3W0D1 207 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 SLC26A4O43511 780 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 KARSQ15046 597 aaKnown RBP11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 NAALADL2Q58DX5 795 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 OR8K1Q8NGG5 319 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 HNRNPLLQ8WVV9 542 aaKnown RBP11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 RBM17Q96I25 401 aaKnown RBP11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 NUP88Q99567 741 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 DESI2Q9BSY9 194 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 LRRC4BQ9NT99 713 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 STK17AQ9UEE5 414 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 KLRC4O43908 158 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 BBOX1O75936 387 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 CASP1P29466 404 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 FXR1P51114 621 aaKnown RBP eCLIP11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 NAPAP54920 295 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 ST5P78524 1137 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 TERF2Q15554 542 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 FIGNQ5HY92 759 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 NEK8Q86SG6 692 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 STAG2Q8N3U4 1231 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 MB21D1Q8N884 522 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 TGFBRAP1Q8WUH2 860 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 EYA3Q99504 573 aa11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 NAPGQ99747 312 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF11B-201ENST00000297350 RAB34Q9BZG1 259 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms