RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 ZNF287Q9HBT7 754 aa12.59□□□□□ -0.39
RFC4-201ENST00000296273 SYNPO2Q9UMS6 1093 aa12.59□□□□□ -0.39
RFC4-201ENST00000296273 A0A0U1RQG5 324 aaPredicted RBP12.58□□□□□ -0.4
RFC4-201ENST00000296273 TLR3O15455 904 aaKnown RBP12.58□□□□□ -0.4
RFC4-201ENST00000296273 ASGR1P07306 291 aa12.58□□□□□ -0.4
RFC4-201ENST00000296273 C6orf222P0C671 652 aaPredicted RBP12.58□□□□□ -0.4
RFC4-201ENST00000296273 FDX1P10109 184 aa12.58□□□□□ -0.4
RFC4-201ENST00000296273 OAZ1P54368 228 aa12.58□□□□□ -0.4
RFC4-201ENST00000296273 GJA9P57773 515 aa12.58□□□□□ -0.4
RFC4-201ENST00000296273 PSRC1Q6PGN9 363 aaPredicted RBP12.58□□□□□ -0.4
RFC4-201ENST00000296273 ANKRD35Q8N283 1001 aa12.58□□□□□ -0.4
RFC4-201ENST00000296273 CHST13Q8NET6 341 aa12.58□□□□□ -0.4
RFC4-201ENST00000296273 VTI1AQ96AJ9 217 aa12.58□□□□□ -0.4
RFC4-201ENST00000296273 BCL11AQ9H165 835 aa12.58□□□□□ -0.4
RFC4-201ENST00000296273 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.58□□□□□ -0.4
RFC4-201ENST00000296273 RIPK3Q9Y572 518 aa12.58□□□□□ -0.4
RFC4-201ENST00000296273 GREB1LQ9C091 1923 aaPredicted RBP12.58□□□□□ -0.4
RFC4-201ENST00000296273 ARVCFO00192 962 aa12.57□□□□□ -0.4
RFC4-201ENST00000296273 NDUFB10O96000 172 aa12.57□□□□□ -0.4
RFC4-201ENST00000296273 RASA1P20936 1047 aa12.57□□□□□ -0.4
RFC4-201ENST00000296273 TMEM240Q5SV17 173 aa12.57□□□□□ -0.4
RFC4-201ENST00000296273 RASIP1Q5U651 963 aa12.57□□□□□ -0.4
RFC4-201ENST00000296273 CCDC129Q6ZRS4 1044 aa12.57□□□□□ -0.4
RFC4-201ENST00000296273 SIRT2Q8IXJ6 389 aa12.57□□□□□ -0.4
RFC4-201ENST00000296273 CPXCR1Q8N123 301 aa12.57□□□□□ -0.4
RFC4-201ENST00000296273 NUP88Q99567 741 aaPredicted RBP12.57□□□□□ -0.4
RFC4-201ENST00000296273 UPF3AQ9H1J1 476 aaKnown RBP12.57□□□□□ -0.4
RFC4-201ENST00000296273 MTIF3Q9H2K0 278 aaKnown RBP12.57□□□□□ -0.4
RFC4-201ENST00000296273 SLC38A10Q9HBR0 1119 aa12.57□□□□□ -0.4
RFC4-201ENST00000296273 FEM1BQ9UK73 627 aa12.57□□□□□ -0.4
RFC4-201ENST00000296273 SPTBN5Q9NRC6 3674 aaKnown RBP12.57□□□□□ -0.4
RFC4-201ENST00000296273 MYADML2A6NDP7 307 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 TNFRSF10AO00220 468 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 NKX3-2P78367 333 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 CCDC144BQ3MJ40 725 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 GNASQ5JWF2 1037 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 AKNAD1Q5T1N1 836 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 ARMCX2Q7L311 632 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 FAM126BQ8IXS8 530 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 ZNF444Q8N0Y2 327 aaPredicted RBP12.56□□□□□ -0.4
RFC4-201ENST00000296273 ATXN2LQ8WWM7 1075 aaKnown RBP12.56□□□□□ -0.4
RFC4-201ENST00000296273 MKL1Q969V6 931 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 STRBPQ96SI9 672 aaKnown RBP12.56□□□□□ -0.4
RFC4-201ENST00000296273 SEZ6LQ9BYH1 1024 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 PBX4Q9BYU1 374 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 LRRCC1Q9C099 1032 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 MYH7P12883 1935 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 IGKV6D-41A0A0C4DH26 115 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 GSG1L2A8MUP6 293 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 MINDY4BA8MYZ0 360 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 CABYRO75952 493 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 CHGBP05060 677 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 CSF2RAP15509 400 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 GNAT2P19087 354 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 SLC4A3P48751 1232 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 NUCB1Q02818 461 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 RAB30Q15771 203 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 C8orf34Q49A92 452 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 USP38Q8NB14 1042 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 GMCL1P1Q8NEA9 526 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 KIFC2Q96AC6 838 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 UPF2Q9HAU5 1272 aaKnown RBP12.56□□□□□ -0.4
RFC4-201ENST00000296273 RAVER2Q9HCJ3 691 aaKnown RBP12.56□□□□□ -0.4
RFC4-201ENST00000296273 CLIP2Q9UDT6 1046 aa12.56□□□□□ -0.4
RFC4-201ENST00000296273 ZBTB47Q9UFB7 747 aaPredicted RBP12.56□□□□□ -0.4
RFC4-201ENST00000296273 ADCY6O43306 1168 aa12.55□□□□□ -0.4
RFC4-201ENST00000296273 TTLL1O95922 423 aa12.55□□□□□ -0.4
RFC4-201ENST00000296273 ZNF365Q70YC5 407 aa12.55□□□□□ -0.4
RFC4-201ENST00000296273 C16orf59Q7L2K0 433 aa12.55□□□□□ -0.4
RFC4-201ENST00000296273 CCDC144CPQ8IYA2 1237 aa12.55□□□□□ -0.4
RFC4-201ENST00000296273 KBTBD3Q8NAB2 608 aa12.55□□□□□ -0.4
RFC4-201ENST00000296273 APPBP2Q92624 585 aa12.55□□□□□ -0.4
RFC4-201ENST00000296273 IL23AQ9NPF7 189 aa12.55□□□□□ -0.4
RFC4-201ENST00000296273 MTMR4Q9NYA4 1195 aa12.55□□□□□ -0.4
RFC4-201ENST00000296273 THEGQ9P2T0 379 aa12.55□□□□□ -0.4
RFC4-201ENST00000296273 MSRAQ9UJ68 235 aa12.55□□□□□ -0.4
RFC4-201ENST00000296273 PRUNE2Q8WUY3 3088 aa12.55□□□□□ -0.4
RFC4-201ENST00000296273 ASB14A6NK59 587 aa12.54□□□□□ -0.4
RFC4-201ENST00000296273 CD4P01730 458 aa12.54□□□□□ -0.4
RFC4-201ENST00000296273 ZFYP08048 801 aaPredicted RBP12.54□□□□□ -0.4
RFC4-201ENST00000296273 BMP3P12645 472 aa12.54□□□□□ -0.4
RFC4-201ENST00000296273 PBX2P40425 430 aa12.54□□□□□ -0.4
RFC4-201ENST00000296273 TNFAIP2Q03169 654 aa12.54□□□□□ -0.4
RFC4-201ENST00000296273 LRRFIP1Q32MZ4 808 aaKnown RBP12.54□□□□□ -0.4
RFC4-201ENST00000296273 HERVK_113Q902F9 699 aa12.54□□□□□ -0.4
RFC4-201ENST00000296273 CEP95Q96GE4 821 aa12.54□□□□□ -0.4
RFC4-201ENST00000296273 FGD4Q96M96 766 aa12.54□□□□□ -0.4
RFC4-201ENST00000296273 PPP1R12CQ9BZL4 782 aa12.54□□□□□ -0.4
RFC4-201ENST00000296273 KATNBL1Q9H079 304 aa12.54□□□□□ -0.4
RFC4-201ENST00000296273 ACAD9Q9H845 621 aa12.54□□□□□ -0.4
RFC4-201ENST00000296273 ECHDC1Q9NTX5 307 aa12.54□□□□□ -0.4
RFC4-201ENST00000296273 PLIN4Q96Q06 1357 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 CTAGE5O15320 804 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 ZEB2O60315 1214 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 FGBP02675 491 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 ACRP10323 421 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 TDO2P48775 406 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 STAT2P52630 851 aa12.53□□□□□ -0.4
RFC4-201ENST00000296273 IRX5P78411 483 aaPredicted RBP12.53□□□□□ -0.4
RFC4-201ENST00000296273 TKFCQ3LXA3 575 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms