RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 P4HA1P13674 534 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 POLR2FP61218 127 aaKnown RBP11.23□□□□□ -0.61
LAMA3-201ENST00000269217 APBA1Q02410 837 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 DLGAP5Q15398 846 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 ZFYVE16Q7Z3T8 1539 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 BUB1O43683 1085 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 H2AFZP0C0S5 128 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 RASSF2P50749 326 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 H2AFVQ71UI9 128 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 CHAMP1Q96JM3 812 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 CDC23Q9UJX2 597 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 FRMPD2Q68DX3 1309 aaPredicted RBP11.23□□□□□ -0.61
LAMA3-201ENST00000269217 PRPF6O94906 941 aaKnown RBP11.23□□□□□ -0.61
LAMA3-201ENST00000269217 PHKA1P46020 1223 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 FAM98CQ17RN3 349 aaKnown RBP11.23□□□□□ -0.61
LAMA3-201ENST00000269217 ANKRD20A3Q5VUR7 823 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.23□□□□□ -0.61
LAMA3-201ENST00000269217 SLC39A2Q9NP94 309 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 TLR7Q9NYK1 1049 aaKnown RBP11.23□□□□□ -0.61
LAMA3-201ENST00000269217 ATP10DQ9P241 1426 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 HGSO14964 777 aaPredicted RBP11.23□□□□□ -0.61
LAMA3-201ENST00000269217 CD2BP2O95400 341 aaKnown RBP11.23□□□□□ -0.61
LAMA3-201ENST00000269217 CLNS1AP54105 237 aaKnown RBP11.23□□□□□ -0.61
LAMA3-201ENST00000269217 GREM2Q9H772 168 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 MRPL11Q9Y3B7 192 aaKnown RBP11.23□□□□□ -0.61
LAMA3-201ENST00000269217 IVNS1ABPQ9Y6Y0 642 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 ADAM9Q13443 819 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 CCDC125Q86Z20 511 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 DEPTORQ8TB45 409 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 H0YCG3 227 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 ATP8B1O43520 1251 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 SRGAP1Q7Z6B7 1085 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 FAM178BQ8IXR5 827 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 PLEKHA4Q9H4M7 779 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 RAB20Q9NX57 234 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 RCOR1Q9UKL0 485 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 SEMA3EO15041 775 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 ZNF853P0CG23 659 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 TROVE2P10155 538 aaKnown RBP eCLIP11.22□□□□□ -0.61
LAMA3-201ENST00000269217 EEF1GP26641 437 aaKnown RBP11.22□□□□□ -0.61
LAMA3-201ENST00000269217 ADORA1P30542 326 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 CASP14P31944 242 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 ZNF589Q86UQ0 364 aaPredicted RBP11.22□□□□□ -0.61
LAMA3-201ENST00000269217 FBXO11Q86XK2 927 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 DDX17Q92841 729 aaKnown RBP11.22□□□□□ -0.61
LAMA3-201ENST00000269217 CNOT6LQ96LI5 555 aaKnown RBP11.22□□□□□ -0.61
LAMA3-201ENST00000269217 CAPS2Q9BXY5 557 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.22□□□□□ -0.61
LAMA3-201ENST00000269217 RIC8AQ9NPQ8 531 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 POLR2MP0CAP2 368 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 PROSER3Q2NL68 480 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 GNPTABQ3T906 1256 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 ATP2A3Q93084 1043 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 TRPC6Q9Y210 931 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 GOLGA8HP0CJ92 632 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 PHBP35232 272 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 BTDP43251 543 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 FAM102BQ5T8I3 360 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 CASC4Q6P4E1 433 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 LRRC47Q8N1G4 583 aaKnown RBP11.22□□□□□ -0.61
LAMA3-201ENST00000269217 ANKRD42Q8N9B4 389 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 DHTKD1Q96HY7 919 aaPredicted RBP11.22□□□□□ -0.61
LAMA3-201ENST00000269217 AK8Q96MA6 479 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 TUBGCP2Q9BSJ2 902 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 ANTXR1Q9H6X2 564 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 SLAIN2Q9P270 581 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 LARSQ9P2J5 1176 aaKnown RBP11.22□□□□□ -0.61
LAMA3-201ENST00000269217 BZW2Q9Y6E2 419 aaKnown RBP11.22□□□□□ -0.61
LAMA3-201ENST00000269217 MBD5Q9P267 1494 aa11.22□□□□□ -0.61
LAMA3-201ENST00000269217 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.21□□□□□ -0.61
LAMA3-201ENST00000269217 K7ENM7 598 aa11.21□□□□□ -0.61
LAMA3-201ENST00000269217 GIPC1O14908 333 aa11.21□□□□□ -0.61
LAMA3-201ENST00000269217 LTKP29376 864 aa11.21□□□□□ -0.61
LAMA3-201ENST00000269217 DPCR1Q3MIW9 517 aa11.21□□□□□ -0.61
LAMA3-201ENST00000269217 RSAD2Q8WXG1 361 aa11.21□□□□□ -0.61
LAMA3-201ENST00000269217 PUS3Q9BZE2 481 aaKnown RBP11.21□□□□□ -0.61
LAMA3-201ENST00000269217 GPHNQ9NQX3 736 aaPredicted RBP11.21□□□□□ -0.61
LAMA3-201ENST00000269217 C1orf112Q9NSG2 853 aa11.21□□□□□ -0.61
LAMA3-201ENST00000269217 TYW1Q9NV66 732 aaKnown RBP11.21□□□□□ -0.61
LAMA3-201ENST00000269217 NRBP1Q9UHY1 535 aa11.21□□□□□ -0.61
LAMA3-201ENST00000269217 GINS2Q9Y248 185 aa11.21□□□□□ -0.61
LAMA3-201ENST00000269217 PDE6CP51160 858 aa11.21□□□□□ -0.61
LAMA3-201ENST00000269217 RETREG2Q8NC44 543 aa11.21□□□□□ -0.61
LAMA3-201ENST00000269217 MGARPQ8TDB4 240 aa11.21□□□□□ -0.61
LAMA3-201ENST00000269217 ATG3Q9NT62 314 aa11.21□□□□□ -0.61
LAMA3-201ENST00000269217 M0R2C6 588 aa11.21□□□□□ -0.62
LAMA3-201ENST00000269217 FOSP01100 380 aaPredicted RBP11.21□□□□□ -0.62
LAMA3-201ENST00000269217 KIF23Q02241 960 aaPredicted RBP11.21□□□□□ -0.62
LAMA3-201ENST00000269217 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.21□□□□□ -0.62
LAMA3-201ENST00000269217 PHLPP2Q6ZVD8 1323 aa11.21□□□□□ -0.62
LAMA3-201ENST00000269217 C11orf57Q6ZUT1 292 aaPredicted RBP11.21□□□□□ -0.62
LAMA3-201ENST00000269217 KRT26Q7Z3Y9 468 aa11.21□□□□□ -0.62
LAMA3-201ENST00000269217 PHLDB2Q86SQ0 1253 aa11.21□□□□□ -0.62
LAMA3-201ENST00000269217 LINC00301Q8NCQ3 95 aa11.21□□□□□ -0.62
LAMA3-201ENST00000269217 TEKT3Q9BXF9 490 aa11.21□□□□□ -0.62
LAMA3-201ENST00000269217 PPP1R12CQ9BZL4 782 aa11.21□□□□□ -0.62
LAMA3-201ENST00000269217 VCXQ9H320 206 aa11.21□□□□□ -0.62
LAMA3-201ENST00000269217 KLHL14Q9P2G3 628 aa11.21□□□□□ -0.62
LAMA3-201ENST00000269217 PCDHA4Q9UN74 947 aa11.21□□□□□ -0.62
LAMA3-201ENST00000269217 PPARDQ03181 441 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms