RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 PDP2Q9P2J9 529 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 PPP1R37O75864 691 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 COPB1P53618 953 aaKnown RBP11.72□□□□□ -0.53
CPT1A-201ENST00000265641 NAA30Q147X3 362 aaPredicted RBP11.72□□□□□ -0.53
CPT1A-201ENST00000265641 KBTBD3Q8NAB2 608 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 KIFAP3Q92845 792 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 ATP6V1G3Q96LB4 118 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.72□□□□□ -0.53
CPT1A-201ENST00000265641 TRMT112Q9UI30 125 aaKnown RBP11.72□□□□□ -0.53
CPT1A-201ENST00000265641 CLASP1Q7Z460 1538 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 CCDC188H7C350 402 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 FOXO3O43524 673 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 HSPA1LP34931 641 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 PPP2R2AP63151 447 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 FBXW10Q5XX13 1052 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 NRBF2Q96F24 287 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 PSMB7Q99436 277 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 KCNF1Q9H3M0 494 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 ZCCHC17Q9NP64 241 aaKnown RBP11.72□□□□□ -0.53
CPT1A-201ENST00000265641 SLC4A4Q9Y6R1 1079 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 CDC42BPBQ9Y5S2 1711 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 NPATQ14207 1427 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 NCOA3Q9Y6Q9 1424 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 RASGRF2O14827 1237 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 EPB41P11171 864 aaKnown RBP11.72□□□□□ -0.53
CPT1A-201ENST00000265641 PDE4DQ08499 809 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 LAMB3Q13751 1172 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 LRIG3Q6UXM1 1119 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 SYCP3Q8IZU3 236 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 NEK9Q8TD19 979 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 SGSM3Q96HU1 749 aa11.72□□□□□ -0.53
CPT1A-201ENST00000265641 ZC3H18Q86VM9 953 aaKnown RBP11.71□□□□□ -0.53
CPT1A-201ENST00000265641 MGARPQ8TDB4 240 aa11.71□□□□□ -0.53
CPT1A-201ENST00000265641 DSCC1Q9BVC3 393 aa11.71□□□□□ -0.53
CPT1A-201ENST00000265641 KCNK3O14649 394 aa11.71□□□□□ -0.53
CPT1A-201ENST00000265641 RNASE9P60153 205 aaKnown RBP11.71□□□□□ -0.53
CPT1A-201ENST00000265641 DPCR1Q3MIW9 517 aa11.71□□□□□ -0.53
CPT1A-201ENST00000265641 PIK3R5Q8WYR1 880 aa11.71□□□□□ -0.53
CPT1A-201ENST00000265641 ZC4H2Q9NQZ6 224 aa11.71□□□□□ -0.53
CPT1A-201ENST00000265641 PACSIN2Q9UNF0 486 aaPredicted RBP11.71□□□□□ -0.53
CPT1A-201ENST00000265641 DIS3Q9Y2L1 958 aaKnown RBP11.71□□□□□ -0.53
CPT1A-201ENST00000265641 HOXB7P09629 217 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 CYLC2Q14093 348 aaPredicted RBP11.71□□□□□ -0.54
CPT1A-201ENST00000265641 NYAP1Q6ZVC0 841 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 CUL5Q93034 780 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 TRIM31Q9BZY9 425 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 C6orf50Q9HD87 102 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 IL1RAPL1Q9NZN1 696 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.71□□□□□ -0.54
CPT1A-201ENST00000265641 FLT4P35916 1363 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 HARSP12081 509 aaKnown RBP11.71□□□□□ -0.54
CPT1A-201ENST00000265641 CASP14P31944 242 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 ZNF174Q15697 407 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 TNNI3KQ59H18 835 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 TYW1BQ6NUM6 668 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 MSANTD4Q8NCY6 345 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 CHMP6Q96FZ7 201 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 SERTAD1Q9UHV2 236 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 FPGT-TNNI3KV9GXZ4 949 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 MAP3K5Q99683 1374 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 PLEKHG2Q9H7P9 1386 aa11.71□□□□□ -0.54
CPT1A-201ENST00000265641 ICA1Q05084 483 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 C2CD5Q86YS7 1000 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 MORC4Q8TE76 937 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 ZNF473Q8WTR7 871 aaKnown RBP11.7□□□□□ -0.54
CPT1A-201ENST00000265641 MAPK8IP1Q9UQF2 711 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 GRID2IPA4D2P6 1211 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 TMEM110-MUSTN1A8MSY1 372 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 PGRMC1O00264 195 aaKnown RBP11.7□□□□□ -0.54
CPT1A-201ENST00000265641 GTPBP6O43824 516 aaPredicted RBP11.7□□□□□ -0.54
CPT1A-201ENST00000265641 SPAG7O75391 227 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 ESRRBO95718 433 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 AKAP4Q5JQC9 854 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 PPP4R1Q8TF05 950 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 KRT12Q99456 494 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 TRPM1Q7Z4N2 1603 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 POLR1AO95602 1720 aaPredicted RBP11.7□□□□□ -0.54
CPT1A-201ENST00000265641 ENO4A6NNW6 628 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 CALUO43852 315 aaPredicted RBP11.7□□□□□ -0.54
CPT1A-201ENST00000265641 SCRN1Q12765 414 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 NR1H3Q13133 447 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 SLC44A4Q53GD3 710 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 SCYL3Q8IZE3 742 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 RILPQ96NA2 401 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 NOVA2Q9UNW9 492 aaKnown RBP11.7□□□□□ -0.54
CPT1A-201ENST00000265641 PLA2G4AP47712 749 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 MRPS25P82663 173 aaKnown RBP11.7□□□□□ -0.54
CPT1A-201ENST00000265641 RBL2Q08999 1139 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 ATP2A3Q93084 1043 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 SLC40A1Q9NP59 571 aa11.7□□□□□ -0.54
CPT1A-201ENST00000265641 LRRIQ3A6PVS8 624 aaPredicted RBP11.69□□□□□ -0.54
CPT1A-201ENST00000265641 SERPINB6P35237 376 aa11.69□□□□□ -0.54
CPT1A-201ENST00000265641 MAP4K1Q92918 833 aa11.69□□□□□ -0.54
CPT1A-201ENST00000265641 EFHD1Q9BUP0 239 aa11.69□□□□□ -0.54
CPT1A-201ENST00000265641 FHOD1Q9Y613 1164 aa11.69□□□□□ -0.54
CPT1A-201ENST00000265641 ANKRD65E5RJM6 399 aa11.69□□□□□ -0.54
CPT1A-201ENST00000265641 YY1P25490 414 aa11.69□□□□□ -0.54
CPT1A-201ENST00000265641 PLCB3Q01970 1234 aa11.69□□□□□ -0.54
CPT1A-201ENST00000265641 SLC39A14Q15043 492 aa11.69□□□□□ -0.54
CPT1A-201ENST00000265641 ADCK5Q3MIX3 580 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms