RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 ANKRD18AQ8IVF6 992 aa18.57■□□□□ 0.56
ZNF541-201ENST00000263351 BLIDQ8IZY5 108 aa18.57■□□□□ 0.56
ZNF541-201ENST00000263351 TFAP4Q01664 338 aa18.57■□□□□ 0.56
ZNF541-201ENST00000263351 HDAC7Q8WUI4 952 aa18.57■□□□□ 0.56
ZNF541-201ENST00000263351 FAM204AQ9H8W3 233 aa18.57■□□□□ 0.56
ZNF541-201ENST00000263351 RBM28Q9NW13 759 aaKnown RBP18.57■□□□□ 0.56
ZNF541-201ENST00000263351 ZNF263O14978 683 aa18.56■□□□□ 0.56
ZNF541-201ENST00000263351 STK4Q13043 487 aa18.56■□□□□ 0.56
ZNF541-201ENST00000263351 CCDC178Q5BJE1 867 aa18.56■□□□□ 0.56
ZNF541-201ENST00000263351 PTF1AQ7RTS3 328 aa18.56■□□□□ 0.56
ZNF541-201ENST00000263351 TRAPPC11Q7Z392 1133 aa18.56■□□□□ 0.56
ZNF541-201ENST00000263351 ZNF507Q8TCN5 953 aa18.56■□□□□ 0.56
ZNF541-201ENST00000263351 EXOC4Q96A65 974 aa18.56■□□□□ 0.56
ZNF541-201ENST00000263351 DUSP9Q99956 384 aaKnown RBP18.56■□□□□ 0.56
ZNF541-201ENST00000263351 LUC7L2Q9Y383 392 aaKnown RBP18.56■□□□□ 0.56
ZNF541-201ENST00000263351 SEMA3EO15041 775 aa18.56■□□□□ 0.56
ZNF541-201ENST00000263351 CXCR5P32302 372 aa18.56■□□□□ 0.56
ZNF541-201ENST00000263351 RCAN1P53805 252 aa18.56■□□□□ 0.56
ZNF541-201ENST00000263351 PPARDQ03181 441 aa18.56■□□□□ 0.56
ZNF541-201ENST00000263351 DIXDC1Q155Q3 683 aa18.56■□□□□ 0.56
ZNF541-201ENST00000263351 OR8K1Q8NGG5 319 aa18.56■□□□□ 0.56
ZNF541-201ENST00000263351 HNRNPLLQ8WVV9 542 aaKnown RBP18.56■□□□□ 0.56
ZNF541-201ENST00000263351 PCMTD1Q96MG8 357 aaPredicted RBP18.56■□□□□ 0.56
ZNF541-201ENST00000263351 BRIP1Q9BX63 1249 aa18.56■□□□□ 0.56
ZNF541-201ENST00000263351 EHD4Q9H223 541 aa18.56■□□□□ 0.56
ZNF541-201ENST00000263351 MYO1CO00159 1063 aa18.55■□□□□ 0.56
ZNF541-201ENST00000263351 GPS2Q13227 327 aa18.55■□□□□ 0.56
ZNF541-201ENST00000263351 SAP30BPQ9UHR5 308 aaKnown RBP18.55■□□□□ 0.56
ZNF541-201ENST00000263351 LGALS16A8MUM7 142 aa18.55■□□□□ 0.56
ZNF541-201ENST00000263351 DDAH1O94760 285 aa18.55■□□□□ 0.56
ZNF541-201ENST00000263351 ADAMTS2O95450 1211 aa18.55■□□□□ 0.56
ZNF541-201ENST00000263351 SYF2O95926 243 aaKnown RBP18.55■□□□□ 0.56
ZNF541-201ENST00000263351 ACTN2P35609 894 aa18.55■□□□□ 0.56
ZNF541-201ENST00000263351 MATR3P43243 847 aaKnown RBP eCLIP18.55■□□□□ 0.56
ZNF541-201ENST00000263351 ANKRD40Q6AI12 368 aa18.55■□□□□ 0.56
ZNF541-201ENST00000263351 ANKRD13CQ8N6S4 541 aa18.55■□□□□ 0.56
ZNF541-201ENST00000263351 MLXIPQ9HAP2 919 aa18.55■□□□□ 0.56
ZNF541-201ENST00000263351 PCDHA6Q9UN73 950 aa18.55■□□□□ 0.56
ZNF541-201ENST00000263351 PCDHA8Q9Y5H6 950 aa18.55■□□□□ 0.56
ZNF541-201ENST00000263351 WHAMMP3Q1A5X7 153 aa18.54■□□□□ 0.56
ZNF541-201ENST00000263351 CAVIN4Q5BKX8 364 aa18.54■□□□□ 0.56
ZNF541-201ENST00000263351 KIAA1328Q86T90 577 aa18.54■□□□□ 0.56
ZNF541-201ENST00000263351 CCDC155Q8N6L0 562 aa18.54■□□□□ 0.56
ZNF541-201ENST00000263351 PNMA1Q8ND90 353 aa18.54■□□□□ 0.56
ZNF541-201ENST00000263351 CCDC51Q96ER9 411 aa18.54■□□□□ 0.56
ZNF541-201ENST00000263351 AK7Q96M32 723 aa18.54■□□□□ 0.56
ZNF541-201ENST00000263351 MYH10P35580 1976 aa18.54■□□□□ 0.56
ZNF541-201ENST00000263351 A0A1B0GUL6 1792 aa18.54■□□□□ 0.56
ZNF541-201ENST00000263351 PLCG1P19174 1290 aa18.54■□□□□ 0.56
ZNF541-201ENST00000263351 TRIM21P19474 475 aaKnown RBP18.54■□□□□ 0.56
ZNF541-201ENST00000263351 TTI2Q6NXR4 508 aa18.54■□□□□ 0.56
ZNF541-201ENST00000263351 GLIS3Q8NEA6 775 aa18.54■□□□□ 0.56
ZNF541-201ENST00000263351 GJA10Q969M2 543 aa18.54■□□□□ 0.56
ZNF541-201ENST00000263351 TUBGCP2Q9BSJ2 902 aa18.54■□□□□ 0.56
ZNF541-201ENST00000263351 VAT1LQ9HCJ6 419 aa18.54■□□□□ 0.56
ZNF541-201ENST00000263351 RNF40O75150 1001 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 ZPR1O75312 459 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 SLC7A5Q01650 507 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 TXNRD1Q16881 649 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 TTC19Q6DKK2 380 aaPredicted RBP18.53■□□□□ 0.56
ZNF541-201ENST00000263351 CSGALNACT2Q8N6G5 542 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 JAKMIP2Q96AA8 810 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 STX8Q9UNK0 236 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 CAPN6Q9Y6Q1 641 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 ERLIN1O75477 346 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 FGRP09769 529 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 DNA2P51530 1060 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 MUM1L1Q5H9M0 696 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 DTHD1Q6ZMT9 781 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 RRP36Q96EU6 259 aaKnown RBP18.53■□□□□ 0.56
ZNF541-201ENST00000263351 DNAJC7Q99615 494 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 MTA3Q9BTC8 594 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 NHEJ1Q9H9Q4 299 aaPredicted RBP18.53■□□□□ 0.56
ZNF541-201ENST00000263351 LRWD1Q9UFC0 647 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 SRP68Q9UHB9 627 aaKnown RBP18.53■□□□□ 0.56
ZNF541-201ENST00000263351 PHLPP1O60346 1717 aa18.53■□□□□ 0.56
ZNF541-201ENST00000263351 CCDC194A0A1B0GVG4 234 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 UBA7P41226 1012 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 USP14P54578 494 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 LETM2Q2VYF4 491 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 COG1Q8WTW3 980 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 KAT14Q9H8E8 782 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 SLC39A2Q9NP94 309 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 JADE2Q9NQC1 790 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 RSPH14Q9UHP6 348 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 RRP15Q9Y3B9 282 aaKnown RBP18.52■□□□□ 0.56
ZNF541-201ENST00000263351 SAR1BQ9Y6B6 198 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 DOT1LQ8TEK3 1739 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 ZC3H4Q9UPT8 1303 aaKnown RBP18.52■□□□□ 0.56
ZNF541-201ENST00000263351 NCK2O43639 380 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 BMP15O95972 392 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 PIP4K2BP78356 416 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 APBA1Q02410 837 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 LRRC31Q6UY01 552 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 TMC4Q7Z404 712 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 MARCH10Q8NA82 808 aaPredicted RBP18.52■□□□□ 0.56
ZNF541-201ENST00000263351 ANKRD20A12PQ8NF67 263 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 KANSL2Q9H9L4 492 aa18.52■□□□□ 0.56
ZNF541-201ENST00000263351 FAM207AQ9NSI2 230 aaPredicted RBP18.52■□□□□ 0.56
ZNF541-201ENST00000263351 MAD2L2Q9UI95 211 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms