RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 EFCAB5A4FU69 1503 aa16.33■□□□□ 0.2
CCDC6-201ENST00000263102 DALRD3Q5D0E6 543 aaKnown RBP16.32■□□□□ 0.2
CCDC6-201ENST00000263102 ADAT2Q7Z6V5 191 aaKnown RBP16.32■□□□□ 0.2
CCDC6-201ENST00000263102 CCNYQ8ND76 341 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 ARPP21Q9UBL0 812 aaPredicted RBP16.32■□□□□ 0.2
CCDC6-201ENST00000263102 IL16Q14005 1332 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 DISP3Q9P2K9 1392 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 IREB2P48200 963 aaKnown RBP16.32■□□□□ 0.2
CCDC6-201ENST00000263102 MIGA2Q7L4E1 593 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 RAB44Q7Z6P3 723 aaPredicted RBP16.32■□□□□ 0.2
CCDC6-201ENST00000263102 TRPC5Q9UL62 973 aaPredicted RBP16.32■□□□□ 0.2
CCDC6-201ENST00000263102 NEMP1O14524 444 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 ATICP31939 592 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 SOX5P35711 763 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 PPP2R3AQ06190 1150 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 PPM1KQ8N3J5 372 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 TSPYL6Q8N831 410 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 SPDL1Q96EA4 605 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 ATP8A2Q9NTI2 1148 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 DDX25Q9UHL0 483 aaKnown RBP16.32■□□□□ 0.2
CCDC6-201ENST00000263102 PCDHB4Q9Y5E5 795 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 EIF4G3O43432 1585 aaKnown RBP16.32■□□□□ 0.2
CCDC6-201ENST00000263102 RPS6KB1P23443 525 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 NOLC1Q14978 699 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCDC6-201ENST00000263102 ANGPTL8Q6UXH0 198 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 FGD4Q96M96 766 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 SLC52A2Q9HAB3 445 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 SLAIN2Q9P270 581 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 NPATQ14207 1427 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 SLFN13Q68D06 897 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 TMEM106CQ9BVX2 250 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 CC2D2AQ9P2K1 1620 aa16.32■□□□□ 0.2
CCDC6-201ENST00000263102 GTF2A1P52655 376 aaPredicted RBP16.31■□□□□ 0.2
CCDC6-201ENST00000263102 MIS18BP1Q6P0N0 1132 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 IWS1Q96ST2 819 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 KDM3AQ9Y4C1 1321 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 ARAP1Q96P48 1450 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 DTNBO60941 627 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 CCDC157Q569K6 752 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 CEP85Q6P2H3 762 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 RIC8AQ9NPQ8 531 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 ATP8B3O60423 1300 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 CYP4A11Q02928 519 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 GCKRQ14397 625 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 RPS6KA1Q15418 735 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 GPKOWQ92917 476 aaPredicted RBP eCLIP16.31■□□□□ 0.2
CCDC6-201ENST00000263102 PANK4Q9NVE7 773 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 TOPBP1Q92547 1522 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 MAP3K7O43318 606 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 GIGYF1O75420 1035 aaPredicted RBP16.31■□□□□ 0.2
CCDC6-201ENST00000263102 COG7P83436 770 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 ANKRD20A3Q5VUR7 823 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 CCDC13Q8IYE1 715 aa16.31■□□□□ 0.2
CCDC6-201ENST00000263102 MRPL46Q9H2W6 279 aaKnown RBP16.31■□□□□ 0.2
CCDC6-201ENST00000263102 SLC27A2O14975 620 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 PPFIA4O75335 1185 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 SRGAP2BP0DMP2 458 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 MAGEA1P43355 309 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 TRIM14Q14142 442 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 DSTYKQ6XUX3 929 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 IFT20Q8IY31 132 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 SDR42E1Q8WUS8 393 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 NT5C3AQ9H0P0 336 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 FAM49AQ9H0Q0 323 aaPredicted RBP16.3■□□□□ 0.2
CCDC6-201ENST00000263102 SLC13A4Q9UKG4 626 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 SUGT1Q9Y2Z0 365 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 RRP9O43818 475 aaKnown RBP16.3■□□□□ 0.2
CCDC6-201ENST00000263102 GARSP41250 739 aaKnown RBP16.3■□□□□ 0.2
CCDC6-201ENST00000263102 ZBTB41Q5SVQ8 909 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 TTC25Q96NG3 672 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 XRCC5P13010 732 aaKnown RBP16.3■□□□□ 0.2
CCDC6-201ENST00000263102 CCDC93Q567U6 631 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 MAIP1Q8WWC4 291 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 SDCCAG3Q96C92 435 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 RSRC1Q96IZ7 334 aaKnown RBP16.3■□□□□ 0.2
CCDC6-201ENST00000263102 USP17L12C9JPN9 530 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 USP17L21D6R901 530 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 THAP12O43422 761 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 PHBP35232 272 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 PCDHA1Q9Y5I3 950 aa16.3■□□□□ 0.2
CCDC6-201ENST00000263102 ESRRBO95718 433 aa16.29■□□□□ 0.2
CCDC6-201ENST00000263102 ACTN1P12814 892 aa16.29■□□□□ 0.2
CCDC6-201ENST00000263102 FAM178BQ8IXR5 827 aa16.29■□□□□ 0.2
CCDC6-201ENST00000263102 YAF2Q8IY57 180 aa16.29■□□□□ 0.2
CCDC6-201ENST00000263102 PDCD7Q8N8D1 485 aaKnown RBP16.29■□□□□ 0.2
CCDC6-201ENST00000263102 ZNF513Q8N8E2 541 aaPredicted RBP16.29■□□□□ 0.2
CCDC6-201ENST00000263102 TTC1Q99614 292 aa16.29■□□□□ 0.2
CCDC6-201ENST00000263102 LGR6Q9HBX8 967 aa16.29■□□□□ 0.2
CCDC6-201ENST00000263102 ZNF215Q9UL58 517 aaPredicted RBP16.29■□□□□ 0.2
CCDC6-201ENST00000263102 IBTKQ9P2D0 1353 aaPredicted RBP16.29■□□□□ 0.2
CCDC6-201ENST00000263102 NFX1Q12986 1120 aaKnown RBP16.29■□□□□ 0.2
CCDC6-201ENST00000263102 RNF139Q8WU17 664 aa16.29■□□□□ 0.2
CCDC6-201ENST00000263102 USP14P54578 494 aa16.29■□□□□ 0.2
CCDC6-201ENST00000263102 FAM71BQ8TC56 605 aa16.29■□□□□ 0.2
CCDC6-201ENST00000263102 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.29■□□□□ 0.2
CCDC6-201ENST00000263102 YIPF2Q9BWQ6 316 aa16.29■□□□□ 0.2
CCDC6-201ENST00000263102 GNGT2O14610 69 aa16.29■□□□□ 0.2
CCDC6-201ENST00000263102 CCND2P30279 289 aa16.29■□□□□ 0.2
CCDC6-201ENST00000263102 ERFEQ4G0M1 354 aa16.29■□□□□ 0.2
CCDC6-201ENST00000263102 DENND2CQ68D51 928 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms