RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 A1CFQ9NQ94 594 aaKnown RBP9.28□□□□□ -0.92
LDB3-201ENST00000263066 FAM184BQ9ULE4 1060 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 MAP2K7O14733 419 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 ATP1A3P13637 1013 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 SEC24CP53992 1094 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 DDR1Q08345 913 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 GRIK3Q13003 919 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 TMTC2Q8N394 836 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 DRAXINQ8NBI3 349 aaPredicted RBP9.28□□□□□ -0.92
LDB3-201ENST00000263066 TATDN2Q93075 761 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 ALS2CR12Q96Q35 445 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 OSBPL5Q9H0X9 879 aaPredicted RBP9.28□□□□□ -0.92
LDB3-201ENST00000263066 ZNF277Q9NRM2 450 aaPredicted RBP9.28□□□□□ -0.92
LDB3-201ENST00000263066 STX8Q9UNK0 236 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 COL15A1P39059 1388 aa9.28□□□□□ -0.92
LDB3-201ENST00000263066 CAMTA1Q9Y6Y1 1673 aa9.27□□□□□ -0.92
LDB3-201ENST00000263066 ANP32DO95626 131 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 FERP16591 822 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 HIBADHP31937 336 aaKnown RBP9.27□□□□□ -0.93
LDB3-201ENST00000263066 PHKA1P46020 1223 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 CACNB3P54284 484 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 TRIM29Q14134 588 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 DPCR1Q3MIW9 517 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 MAEAQ7L5Y9 396 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 SH2D3CQ8N5H7 860 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 ARFGAP2Q8N6H7 521 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 ATL2Q8NHH9 583 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 RASSF8Q8NHQ8 419 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 SNRNP27Q8WVK2 155 aaKnown RBP9.27□□□□□ -0.93
LDB3-201ENST00000263066 NUP88Q99567 741 aaPredicted RBP9.27□□□□□ -0.93
LDB3-201ENST00000263066 ZKSCAN3Q9BRR0 538 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 L3MBTL1Q9Y468 752 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 CLRN2A0PK11 232 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 WTIPA6NIX2 430 aaPredicted RBP9.27□□□□□ -0.93
LDB3-201ENST00000263066 ENC1O14682 589 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 MAFGO15525 162 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 HIP1RO75146 1068 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 SASH1O94885 1247 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 SLC15A2Q16348 729 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 NAA16Q6N069 864 aaPredicted RBP9.27□□□□□ -0.93
LDB3-201ENST00000263066 TOGARAM2Q6ZUX3 1019 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 RUFY3Q7L099 469 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 MRPS27Q92552 414 aaKnown RBP9.27□□□□□ -0.93
LDB3-201ENST00000263066 PCNTO95613 3336 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 SIPA1L3O60292 1781 aaPredicted RBP9.27□□□□□ -0.93
LDB3-201ENST00000263066 COL5A2P05997 1499 aaPredicted RBP9.27□□□□□ -0.93
LDB3-201ENST00000263066 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.27□□□□□ -0.93
LDB3-201ENST00000263066 FMNL1O95466 1100 aaPredicted RBP9.27□□□□□ -0.93
LDB3-201ENST00000263066 HOXB7P09629 217 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 DEUP1Q05D60 604 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 CKAP4Q07065 602 aaKnown RBP9.27□□□□□ -0.93
LDB3-201ENST00000263066 CCDC96Q2M329 555 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 ACCSLQ4AC99 568 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 NARFQ9UHQ1 456 aa9.27□□□□□ -0.93
LDB3-201ENST00000263066 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.26□□□□□ -0.93
LDB3-201ENST00000263066 RTN3O95197 1032 aaPredicted RBP9.26□□□□□ -0.93
LDB3-201ENST00000263066 CHGBP05060 677 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 RXRAP19793 462 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 MECOMQ03112 1051 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 NNTQ13423 1086 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 IQCB1Q15051 598 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 FAM133BQ5BKY9 247 aaKnown RBP9.26□□□□□ -0.93
LDB3-201ENST00000263066 ZMAT2Q96NC0 199 aaKnown RBP9.26□□□□□ -0.93
LDB3-201ENST00000263066 NOD2Q9HC29 1040 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.26□□□□□ -0.93
LDB3-201ENST00000263066 ZNF711Q9Y462 761 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 OVOS2A0A0G2JMS6 1433 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 ANKRD1Q15327 319 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 KBTBD12Q3ZCT8 623 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 TNNI3KQ59H18 835 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 GKAP1Q5VSY0 366 aaPredicted RBP9.26□□□□□ -0.93
LDB3-201ENST00000263066 LONP2Q86WA8 852 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 MFN1Q8IWA4 741 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 TRIML1Q8N9V2 468 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 C8orf76Q96K31 380 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 FAM227BQ96M60 508 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 VCPKMTQ9H867 229 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 FPGT-TNNI3KV9GXZ4 949 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 GLI3P10071 1580 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 CDHR2Q9BYE9 1310 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 COL18A1P39060 1754 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 LMO7Q8WWI1 1683 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 VAV2P52735 878 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 MYL5Q02045 173 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 MKRN3Q13064 507 aaKnown RBP9.26□□□□□ -0.93
LDB3-201ENST00000263066 OLFML1Q6UWY5 402 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 PSMB7Q99436 277 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 SELENOOQ9BVL4 669 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 NACAP1Q9BZK3 213 aa9.26□□□□□ -0.93
LDB3-201ENST00000263066 BZW2Q9Y6E2 419 aaKnown RBP9.26□□□□□ -0.93
LDB3-201ENST00000263066 ALS2Q96Q42 1657 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 PAFAH1B1P43034 410 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 SESN3P58005 492 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 DYNC1I2Q13409 638 aaKnown RBP9.25□□□□□ -0.93
LDB3-201ENST00000263066 ZNF827Q17R98 1081 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 MFSD14BQ5SR56 506 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 TTLL11Q8NHH1 800 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 COG1Q8WTW3 980 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 EPAS1Q99814 870 aa9.25□□□□□ -0.93
LDB3-201ENST00000263066 MAF1Q9H063 256 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms