RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 STX17P56962 302 aa15.41■□□□□ 0.06
VMP1-201ENST00000262291 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.41■□□□□ 0.06
VMP1-201ENST00000262291 QSER1Q2KHR3 1735 aa15.41■□□□□ 0.06
VMP1-201ENST00000262291 CDK11BP21127 795 aaKnown RBP15.4■□□□□ 0.06
VMP1-201ENST00000262291 GTF2F1P35269 517 aaKnown RBP eCLIP15.4■□□□□ 0.06
VMP1-201ENST00000262291 NOVP48745 357 aa15.4■□□□□ 0.06
VMP1-201ENST00000262291 ZNF543Q08ER8 600 aa15.4■□□□□ 0.06
VMP1-201ENST00000262291 RRP1BQ14684 758 aaKnown RBP15.4■□□□□ 0.06
VMP1-201ENST00000262291 CDAN1Q8IWY9 1227 aa15.4■□□□□ 0.06
VMP1-201ENST00000262291 RASSF8Q8NHQ8 419 aa15.4■□□□□ 0.06
VMP1-201ENST00000262291 ZMYND12Q9H0C1 365 aa15.4■□□□□ 0.06
VMP1-201ENST00000262291 JMJD4Q9H9V9 463 aa15.4■□□□□ 0.06
VMP1-201ENST00000262291 C6orf50Q9HD87 102 aa15.4■□□□□ 0.06
VMP1-201ENST00000262291 HOOK1Q9UJC3 728 aaKnown RBP15.4■□□□□ 0.06
VMP1-201ENST00000262291 BMP15O95972 392 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 SLFN14P0C7P3 912 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 TRAPPC10P48553 1259 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 FANCCQ00597 558 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 TMC6Q7Z403 805 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 TBCKQ8TEA7 893 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 IPO4Q8TEX9 1081 aaKnown RBP15.39■□□□□ 0.05
VMP1-201ENST00000262291 MTRQ99707 1265 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 RIOX1Q9H6W3 641 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 PI4KBQ9UBF8 816 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 PLIN4Q96Q06 1357 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 SHTN1A0MZ66 631 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 MYL5Q02045 173 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 MRFAP1L1Q96HT8 127 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 MED15Q96RN5 788 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 BPIFA3Q9BQP9 254 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 SERPINA10Q9UK55 444 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 COL4A5P29400 1685 aa15.39■□□□□ 0.05
VMP1-201ENST00000262291 SMTNL1A8MU46 457 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 RIOK3O14730 519 aaKnown RBP15.38■□□□□ 0.05
VMP1-201ENST00000262291 SARSP49591 514 aaKnown RBP15.38■□□□□ 0.05
VMP1-201ENST00000262291 NT5C2P49902 561 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 GOLGA8FQ08AF8 430 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 GOLGA8DPQ0D2H9 430 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 MORC3Q14149 939 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 ASPRV1Q53RT3 343 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 CCDC93Q567U6 631 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.38■□□□□ 0.05
VMP1-201ENST00000262291 GJA10Q969M2 543 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 VEZTQ9HBM0 779 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 TMEM232C9JQI7 657 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 SERPINC1P01008 464 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 CD44P16070 742 aaKnown RBP15.38■□□□□ 0.05
VMP1-201ENST00000262291 CUL4BQ13620 913 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 NONOQ15233 471 aaKnown RBP eCLIP15.38■□□□□ 0.05
VMP1-201ENST00000262291 SAMD1Q6SPF0 538 aaPredicted RBP15.38■□□□□ 0.05
VMP1-201ENST00000262291 DTHD1Q6ZMT9 781 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 SIAH1Q8IUQ4 282 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 SPICE1Q8N0Z3 855 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 REXO1Q8N1G1 1221 aaKnown RBP15.38■□□□□ 0.05
VMP1-201ENST00000262291 DAGLBQ8NCG7 672 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 KIAA1524Q8TCG1 905 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 CSRNP1Q96S65 589 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 IDI2Q9BXS1 227 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 MAPK8IP1Q9UQF2 711 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 SRCAPQ6ZRS2 3230 aa15.38■□□□□ 0.05
VMP1-201ENST00000262291 GH2P01242 217 aa15.37■□□□□ 0.05
VMP1-201ENST00000262291 TNNI2P48788 182 aa15.37■□□□□ 0.05
VMP1-201ENST00000262291 SNHG28P0DPA3 235 aa15.37■□□□□ 0.05
VMP1-201ENST00000262291 TPM4P67936 248 aa15.37■□□□□ 0.05
VMP1-201ENST00000262291 ICA1Q05084 483 aa15.37■□□□□ 0.05
VMP1-201ENST00000262291 MYH4Q9Y623 1939 aa15.37■□□□□ 0.05
VMP1-201ENST00000262291 SIPA1L1O43166 1804 aa15.37■□□□□ 0.05
VMP1-201ENST00000262291 GNA11P29992 359 aa15.37■□□□□ 0.05
VMP1-201ENST00000262291 TECP42680 631 aa15.37■□□□□ 0.05
VMP1-201ENST00000262291 SLC1A4P43007 532 aa15.37■□□□□ 0.05
VMP1-201ENST00000262291 DHX8Q14562 1220 aaKnown RBP15.37■□□□□ 0.05
VMP1-201ENST00000262291 E2F4Q16254 413 aa15.37■□□□□ 0.05
VMP1-201ENST00000262291 SLFN13Q68D06 897 aa15.37■□□□□ 0.05
VMP1-201ENST00000262291 POTEDQ86YR6 584 aa15.37■□□□□ 0.05
VMP1-201ENST00000262291 SUPT20HQ8NEM7 779 aa15.37■□□□□ 0.05
VMP1-201ENST00000262291 LRRC15Q8TF66 581 aa15.37■□□□□ 0.05
VMP1-201ENST00000262291 SAMSN1Q9NSI8 373 aaKnown RBP15.37■□□□□ 0.05
VMP1-201ENST00000262291 NFE2L3Q9Y4A8 694 aa15.37■□□□□ 0.05
VMP1-201ENST00000262291 TDP2O95551 362 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 CDC25BP30305 580 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 ADCY7P51828 1080 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 DPYDQ12882 1025 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 IKQ13123 557 aaPredicted RBP15.36■□□□□ 0.05
VMP1-201ENST00000262291 ABCB5Q2M3G0 1257 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 PDXDC2PQ6P474 469 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 RSBN1LQ6PCB5 846 aaPredicted RBP15.36■□□□□ 0.05
VMP1-201ENST00000262291 MIGA2Q7L4E1 593 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 IQUBQ8NA54 791 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 CCDC12Q8WUD4 166 aaPredicted RBP15.36■□□□□ 0.05
VMP1-201ENST00000262291 EHD4Q9H223 541 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 DHX36Q9H2U1 1008 aaKnown RBP15.36■□□□□ 0.05
VMP1-201ENST00000262291 IKBKBO14920 756 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 STAT6P42226 847 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 UBASH3AP57075 661 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 KANK3Q6NY19 840 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 KRT25Q7Z3Z0 450 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 SH3RF1Q7Z6J0 888 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 NEK8Q86SG6 692 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 C10orf71Q711Q0 1435 aa15.36■□□□□ 0.05
VMP1-201ENST00000262291 TXKP42681 527 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms