RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 Q6ZUG5 572 aa21.82■■□□□ 1.08
CYSTM1-201ENST00000261811 CHST13Q8NET6 341 aa21.82■■□□□ 1.08
CYSTM1-201ENST00000261811 SENP2Q9HC62 589 aa21.82■■□□□ 1.08
CYSTM1-201ENST00000261811 MAD2L2Q9UI95 211 aa21.82■■□□□ 1.08
CYSTM1-201ENST00000261811 SMCHD1A6NHR9 2005 aa21.82■■□□□ 1.08
CYSTM1-201ENST00000261811 PALM3A6NDB9 673 aaPredicted RBP21.81■■□□□ 1.08
CYSTM1-201ENST00000261811 ICAM1P05362 532 aa21.81■■□□□ 1.08
CYSTM1-201ENST00000261811 PTPREP23469 700 aa21.81■■□□□ 1.08
CYSTM1-201ENST00000261811 RGS2P41220 211 aa21.81■■□□□ 1.08
CYSTM1-201ENST00000261811 TRAF1Q13077 416 aa21.81■■□□□ 1.08
CYSTM1-201ENST00000261811 KCTD2Q14681 263 aa21.81■■□□□ 1.08
CYSTM1-201ENST00000261811 TRMT44Q8IYL2 757 aaKnown RBP21.81■■□□□ 1.08
CYSTM1-201ENST00000261811 ABRAQ8N0Z2 381 aa21.81■■□□□ 1.08
CYSTM1-201ENST00000261811 FBXL16Q8N461 479 aa21.81■■□□□ 1.08
CYSTM1-201ENST00000261811 TCEANC2Q96MN5 208 aa21.81■■□□□ 1.08
CYSTM1-201ENST00000261811 UBA5Q9GZZ9 404 aa21.81■■□□□ 1.08
CYSTM1-201ENST00000261811 CCPG1Q9ULG6 757 aa21.81■■□□□ 1.08
CYSTM1-201ENST00000261811 NAP1L2Q9ULW6 460 aaPredicted RBP21.81■■□□□ 1.08
CYSTM1-201ENST00000261811 SEC24BO95487 1268 aa21.8■■□□□ 1.08
CYSTM1-201ENST00000261811 SLC9C1Q4G0N8 1177 aa21.8■■□□□ 1.08
CYSTM1-201ENST00000261811 ADGRF4Q8IZF3 695 aa21.8■■□□□ 1.08
CYSTM1-201ENST00000261811 SLAIN1Q8ND83 568 aa21.8■■□□□ 1.08
CYSTM1-201ENST00000261811 MMP19Q99542 508 aa21.8■■□□□ 1.08
CYSTM1-201ENST00000261811 GPHNQ9NQX3 736 aaPredicted RBP21.8■■□□□ 1.08
CYSTM1-201ENST00000261811 PTCH2Q9Y6C5 1203 aa21.8■■□□□ 1.08
CYSTM1-201ENST00000261811 ZBTB43O43298 467 aa21.8■■□□□ 1.08
CYSTM1-201ENST00000261811 RCAN1P53805 252 aa21.8■■□□□ 1.08
CYSTM1-201ENST00000261811 CAP1Q01518 475 aa21.8■■□□□ 1.08
CYSTM1-201ENST00000261811 PPP2R5BQ15173 497 aa21.8■■□□□ 1.08
CYSTM1-201ENST00000261811 DPP9Q86TI2 863 aa21.8■■□□□ 1.08
CYSTM1-201ENST00000261811 STAG2Q8N3U4 1231 aa21.8■■□□□ 1.08
CYSTM1-201ENST00000261811 VAT1LQ9HCJ6 419 aa21.8■■□□□ 1.08
CYSTM1-201ENST00000261811 RBM28Q9NW13 759 aaKnown RBP21.8■■□□□ 1.08
CYSTM1-201ENST00000261811 GABRQQ9UN88 632 aa21.8■■□□□ 1.08
CYSTM1-201ENST00000261811 RBBP6Q7Z6E9 1792 aaKnown RBP21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 KLF18A0A0U1RQI7 1052 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 ADCY3O60266 1144 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 XRCC5P13010 732 aaKnown RBP21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 ALAS1P13196 640 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 CPA1P15085 419 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 SMARCA1P28370 1054 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 GRK4P32298 578 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 MAP2K5Q13163 448 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 GRB14Q14449 540 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 CDC37Q16543 378 aaPredicted RBP21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 MORN1Q5T089 497 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 APOA5Q6Q788 366 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 MICU3Q86XE3 530 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 FANCBQ8NB91 859 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 PXYLP1Q8TE99 480 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 BRF1Q92994 677 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 DDX11Q96FC9 970 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 MYL10Q9BUA6 226 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 ACAD9Q9H845 621 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 PDRG1Q9NUG6 133 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 BIN2Q9UBW5 565 aaPredicted RBP21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 GJD2Q9UKL4 321 aa21.79■■□□□ 1.08
CYSTM1-201ENST00000261811 CCDC196A0A1B0GTZ2 297 aa21.78■■□□□ 1.08
CYSTM1-201ENST00000261811 SNAP25P60880 206 aa21.78■■□□□ 1.08
CYSTM1-201ENST00000261811 ANKRD35Q8N283 1001 aa21.78■■□□□ 1.08
CYSTM1-201ENST00000261811 AGBL1Q96MI9 1066 aa21.78■■□□□ 1.08
CYSTM1-201ENST00000261811 TRERF1Q96PN7 1200 aa21.78■■□□□ 1.08
CYSTM1-201ENST00000261811 APBA2Q99767 749 aa21.78■■□□□ 1.08
CYSTM1-201ENST00000261811 HOMER2Q9NSB8 354 aa21.78■■□□□ 1.08
CYSTM1-201ENST00000261811 RNF146Q9NTX7 359 aa21.78■■□□□ 1.08
CYSTM1-201ENST00000261811 HPS5Q9UPZ3 1129 aa21.78■■□□□ 1.08
CYSTM1-201ENST00000261811 ZNF536O15090 1300 aa21.77■■□□□ 1.08
CYSTM1-201ENST00000261811 CYP2B6P20813 491 aa21.77■■□□□ 1.07
CYSTM1-201ENST00000261811 ADORA2AP29274 412 aa21.77■■□□□ 1.07
CYSTM1-201ENST00000261811 COL9A3Q14050 684 aaPredicted RBP21.77■■□□□ 1.07
CYSTM1-201ENST00000261811 ANKRD1Q15327 319 aa21.77■■□□□ 1.07
CYSTM1-201ENST00000261811 AGXT2Q9BYV1 514 aa21.77■■□□□ 1.07
CYSTM1-201ENST00000261811 UPF3BQ9BZI7 483 aaKnown RBP21.77■■□□□ 1.07
CYSTM1-201ENST00000261811 RIPK3Q9Y572 518 aa21.77■■□□□ 1.07
CYSTM1-201ENST00000261811 UBXN2AP68543 259 aa21.76■■□□□ 1.07
CYSTM1-201ENST00000261811 RTN1Q16799 776 aa21.76■■□□□ 1.07
CYSTM1-201ENST00000261811 FBXO11Q86XK2 927 aa21.76■■□□□ 1.07
CYSTM1-201ENST00000261811 CCDC144CPQ8IYA2 1237 aa21.76■■□□□ 1.07
CYSTM1-201ENST00000261811 AMNQ9BXJ7 453 aa21.76■■□□□ 1.07
CYSTM1-201ENST00000261811 C22orf23Q9BZE7 217 aa21.76■■□□□ 1.07
CYSTM1-201ENST00000261811 CPVLQ9H3G5 476 aa21.76■■□□□ 1.07
CYSTM1-201ENST00000261811 RIOX1Q9H6W3 641 aa21.76■■□□□ 1.07
CYSTM1-201ENST00000261811 JMJD4Q9H9V9 463 aa21.76■■□□□ 1.07
CYSTM1-201ENST00000261811 SEC63Q9UGP8 760 aaKnown RBP21.76■■□□□ 1.07
CYSTM1-201ENST00000261811 PFASO15067 1338 aa21.75■■□□□ 1.07
CYSTM1-201ENST00000261811 ABCB11O95342 1321 aa21.75■■□□□ 1.07
CYSTM1-201ENST00000261811 GOLGA8AA7E2F4 631 aa21.75■■□□□ 1.07
CYSTM1-201ENST00000261811 GOLGA8BA8MQT2 603 aa21.75■■□□□ 1.07
CYSTM1-201ENST00000261811 ZBTB5O15062 677 aa21.75■■□□□ 1.07
CYSTM1-201ENST00000261811 METAP2P50579 478 aaKnown RBP eCLIP21.75■■□□□ 1.076e-6■□□□□ 10.3
CYSTM1-201ENST00000261811 APOBRQ0VD83 1088 aa21.75■■□□□ 1.07
CYSTM1-201ENST00000261811 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.75■■□□□ 1.07
CYSTM1-201ENST00000261811 USP6NLQ92738 828 aa21.75■■□□□ 1.07
CYSTM1-201ENST00000261811 RRP36Q96EU6 259 aaKnown RBP21.75■■□□□ 1.07
CYSTM1-201ENST00000261811 IL17RAQ96F46 866 aa21.75■■□□□ 1.07
CYSTM1-201ENST00000261811 ABHD8Q96I13 439 aa21.75■■□□□ 1.07
CYSTM1-201ENST00000261811 SPZ1Q9BXG8 430 aa21.75■■□□□ 1.07
CYSTM1-201ENST00000261811 BRPF3Q9ULD4 1205 aa21.75■■□□□ 1.07
CYSTM1-201ENST00000261811 HOXC6P09630 235 aa21.74■■□□□ 1.07
CYSTM1-201ENST00000261811 RXRAP19793 462 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms