RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 UBE2Q2LH0YL09 131 aa21.5■■□□□ 1.03
COL4A3BP-201ENST00000261415 GOLGA8HP0CJ92 632 aa21.5■■□□□ 1.03
COL4A3BP-201ENST00000261415 DLK2Q6UY11 383 aa21.5■■□□□ 1.03
COL4A3BP-201ENST00000261415 ATP6V1DQ9Y5K8 247 aa21.5■■□□□ 1.03
COL4A3BP-201ENST00000261415 CTNND1O60716 968 aaKnown RBP21.5■■□□□ 1.03
COL4A3BP-201ENST00000261415 ZSCAN22P10073 491 aaPredicted RBP21.5■■□□□ 1.03
COL4A3BP-201ENST00000261415 GNAQP50148 359 aa21.5■■□□□ 1.03
COL4A3BP-201ENST00000261415 FOSBP53539 338 aa21.5■■□□□ 1.03
COL4A3BP-201ENST00000261415 CDC37L1Q7L3B6 337 aa21.5■■□□□ 1.03
COL4A3BP-201ENST00000261415 ZNF112Q9UJU3 913 aa21.5■■□□□ 1.03
COL4A3BP-201ENST00000261415 FZD1Q9UP38 647 aa21.5■■□□□ 1.03
COL4A3BP-201ENST00000261415 A0A1W2PRG0 241 aa21.49■■□□□ 1.03
COL4A3BP-201ENST00000261415 INPP5BP32019 993 aa21.49■■□□□ 1.03
COL4A3BP-201ENST00000261415 LRMPQ12912 555 aa21.49■■□□□ 1.03
COL4A3BP-201ENST00000261415 AIFM3Q96NN9 605 aa21.49■■□□□ 1.03
COL4A3BP-201ENST00000261415 ARHGEF10LQ9HCE6 1279 aa21.49■■□□□ 1.03
COL4A3BP-201ENST00000261415 DEXIO95424 95 aa21.49■■□□□ 1.03
COL4A3BP-201ENST00000261415 ZSCAN26Q16670 478 aa21.49■■□□□ 1.03
COL4A3BP-201ENST00000261415 WRNIP1Q96S55 665 aa21.49■■□□□ 1.03
COL4A3BP-201ENST00000261415 KLRF2D3W0D1 207 aa21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 H3BQV1 296 aa21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 ATP8B1O43520 1251 aa21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 MYCNP04198 464 aaPredicted RBP21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 PNMA6AP0CW24 399 aaPredicted RBP21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 ASPRV1Q53RT3 343 aa21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 IFFO2Q5TF58 517 aa21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 ALG1Q9BT22 464 aa21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 GINM1Q9NU53 330 aa21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 SYNPO2Q9UMS6 1093 aa21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 PRPF3O43395 683 aaKnown RBP21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 ECE1P42892 770 aa21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 AKAP17AQ02040 695 aaKnown RBP21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 NYAP1Q6ZVC0 841 aa21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 GMCL1P1Q8NEA9 526 aa21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 NEK11Q8NG66 645 aa21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 ACER1Q8TDN7 264 aa21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 WASF1Q92558 559 aa21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 C8orf76Q96K31 380 aa21.48■■□□□ 1.03
COL4A3BP-201ENST00000261415 FRMPD2Q68DX3 1309 aaPredicted RBP21.47■■□□□ 1.03
COL4A3BP-201ENST00000261415 PTPRFP10586 1907 aa21.47■■□□□ 1.03
COL4A3BP-201ENST00000261415 RAD21O60216 631 aa21.47■■□□□ 1.03
COL4A3BP-201ENST00000261415 PLA2G4AP47712 749 aa21.47■■□□□ 1.03
COL4A3BP-201ENST00000261415 ZNF543Q08ER8 600 aa21.47■■□□□ 1.03
COL4A3BP-201ENST00000261415 GOLGA5Q8TBA6 731 aa21.47■■□□□ 1.03
COL4A3BP-201ENST00000261415 KLRG1Q96E93 195 aa21.47■■□□□ 1.03
COL4A3BP-201ENST00000261415 LZTS2Q9BRK4 669 aa21.47■■□□□ 1.03
COL4A3BP-201ENST00000261415 ARGLU1Q9NWB6 273 aaPredicted RBP21.47■■□□□ 1.03
COL4A3BP-201ENST00000261415 JRKLQ9Y4A0 524 aa21.47■■□□□ 1.03
COL4A3BP-201ENST00000261415 V9GY48 417 aaPredicted RBP21.47■■□□□ 1.03
COL4A3BP-201ENST00000261415 F5H6K3 240 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 F13A1P00488 732 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 POTEIP0CG38 1075 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 POTEJP0CG39 1038 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 VEGFAP15692 232 aaPredicted RBP21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 KLRC3Q07444 240 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 SLC35G1Q2M3R5 365 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 FOXD4L6Q3SYB3 417 aaPredicted RBP21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 SLFN13Q68D06 897 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 FOXD4L3Q6VB84 417 aaPredicted RBP21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 SRLQ86TD4 932 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 CCDC84Q86UT8 332 aaPredicted RBP21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 RRAGCQ9HB90 399 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 GJB4Q9NTQ9 266 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 TMX2Q9Y320 296 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 hCG_1642624A0A1W2PR95 340 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 CYTH3O43739 400 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 GUCY1B3Q02153 619 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 SCYL3Q8IZE3 742 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 DCAF4Q8WV16 495 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 ZKSCAN4Q969J2 545 aaPredicted RBP21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 CDCA5Q96FF9 252 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 GLIS2Q9BZE0 524 aaPredicted RBP21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 CPVLQ9H3G5 476 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 ELP1O95163 1332 aa21.46■■□□□ 1.03
COL4A3BP-201ENST00000261415 PRKG1Q13976 671 aa21.45■■□□□ 1.02
COL4A3BP-201ENST00000261415 PKN1Q16512 942 aa21.45■■□□□ 1.02
COL4A3BP-201ENST00000261415 PLA2G4DQ86XP0 818 aa21.45■■□□□ 1.02
COL4A3BP-201ENST00000261415 FBXO18Q8NFZ0 1043 aa21.45■■□□□ 1.02
COL4A3BP-201ENST00000261415 SPZ1Q9BXG8 430 aa21.45■■□□□ 1.02
COL4A3BP-201ENST00000261415 CLEC11AQ9Y240 323 aa21.45■■□□□ 1.02
COL4A3BP-201ENST00000261415 CNPY2Q9Y2B0 182 aa21.45■■□□□ 1.02
COL4A3BP-201ENST00000261415 CEP83Q9Y592 693 aa21.45■■□□□ 1.02
COL4A3BP-201ENST00000261415 NDUFB10O96000 172 aa21.45■■□□□ 1.02
COL4A3BP-201ENST00000261415 CCDC96Q2M329 555 aa21.45■■□□□ 1.02
COL4A3BP-201ENST00000261415 GPATCH4Q5T3I0 446 aaKnown RBP21.45■■□□□ 1.02
COL4A3BP-201ENST00000261415 OTUD7BQ6GQQ9 843 aa21.45■■□□□ 1.02
COL4A3BP-201ENST00000261415 TRIM66O15016 1216 aa21.44■■□□□ 1.02
COL4A3BP-201ENST00000261415 USP2O75604 605 aaPredicted RBP21.44■■□□□ 1.02
COL4A3BP-201ENST00000261415 SMARCA1P28370 1054 aa21.44■■□□□ 1.02
COL4A3BP-201ENST00000261415 CDC25BP30305 580 aa21.44■■□□□ 1.02
COL4A3BP-201ENST00000261415 SLC1A4P43007 532 aa21.44■■□□□ 1.02
COL4A3BP-201ENST00000261415 ZNF75DP51815 510 aa21.44■■□□□ 1.02
COL4A3BP-201ENST00000261415 KCTD1Q719H9 257 aa21.44■■□□□ 1.02
COL4A3BP-201ENST00000261415 FERMT3Q86UX7 667 aa21.44■■□□□ 1.02
COL4A3BP-201ENST00000261415 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.44■■□□□ 1.02
COL4A3BP-201ENST00000261415 TMX1Q9H3N1 280 aa21.44■■□□□ 1.02
COL4A3BP-201ENST00000261415 SH2D4AQ9H788 454 aa21.44■■□□□ 1.02
COL4A3BP-201ENST00000261415 GPCPD1Q9NPB8 672 aa21.44■■□□□ 1.02
COL4A3BP-201ENST00000261415 PARP14Q460N5 1801 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms