RNA–Protein interactions for RNA: ENST00000247295.4

FAM78A-201, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 2

Gene FAM78A, Length 4,560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-201ENST00000247295 MCAMP43121 646 aa12.53□□□□□ -0.4
FAM78A-201ENST00000247295 CERKLQ49MI3 558 aaPredicted RBP12.53□□□□□ -0.4
FAM78A-201ENST00000247295 NUP58Q9BVL2 599 aa12.53□□□□□ -0.4
FAM78A-201ENST00000247295 MTUS1Q9ULD2 1270 aa12.53□□□□□ -0.4
FAM78A-201ENST00000247295 PCDHA1Q9Y5I3 950 aa12.53□□□□□ -0.4
FAM78A-201ENST00000247295 B4DLN1 442 aa12.53□□□□□ -0.4
FAM78A-201ENST00000247295 SLC16A2P36021 539 aa12.53□□□□□ -0.4
FAM78A-201ENST00000247295 SETDB1Q15047 1291 aa12.53□□□□□ -0.4
FAM78A-201ENST00000247295 INTS8Q75QN2 995 aaKnown RBP12.53□□□□□ -0.4
FAM78A-201ENST00000247295 TMEM87AQ8NBN3 555 aa12.53□□□□□ -0.4
FAM78A-201ENST00000247295 FERMT1Q9BQL6 677 aa12.53□□□□□ -0.4
FAM78A-201ENST00000247295 MED4Q9NPJ6 270 aa12.53□□□□□ -0.4
FAM78A-201ENST00000247295 ATP2A1O14983 1001 aa12.52□□□□□ -0.4
FAM78A-201ENST00000247295 BRD2P25440 801 aaKnown RBP12.52□□□□□ -0.4
FAM78A-201ENST00000247295 ICA1Q05084 483 aa12.52□□□□□ -0.4
FAM78A-201ENST00000247295 CCDC38Q502W7 563 aa12.52□□□□□ -0.4
FAM78A-201ENST00000247295 TDRD7Q8NHU6 1098 aaKnown RBP12.52□□□□□ -0.4
FAM78A-201ENST00000247295 MIPOL1Q8TD10 442 aa12.52□□□□□ -0.4
FAM78A-201ENST00000247295 ATP8A2Q9NTI2 1148 aa12.52□□□□□ -0.4
FAM78A-201ENST00000247295 MTRF1LQ9UGC7 380 aaKnown RBP12.52□□□□□ -0.4
FAM78A-201ENST00000247295 THRAP3Q9Y2W1 955 aaKnown RBP12.52□□□□□ -0.4
FAM78A-201ENST00000247295 ABCC3O15438 1527 aa12.52□□□□□ -0.4
FAM78A-201ENST00000247295 ZCCHC11Q5TAX3 1644 aaKnown RBP12.52□□□□□ -0.4
FAM78A-201ENST00000247295 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.52□□□□□ -0.4
FAM78A-201ENST00000247295 CLRN2A0PK11 232 aa12.52□□□□□ -0.4
FAM78A-201ENST00000247295 TESPA1A2RU30 521 aaPredicted RBP12.52□□□□□ -0.4
FAM78A-201ENST00000247295 PSDA5PKW4 1024 aaPredicted RBP12.52□□□□□ -0.4
FAM78A-201ENST00000247295 CALUO43852 315 aaPredicted RBP12.52□□□□□ -0.4
FAM78A-201ENST00000247295 ATP2B4P23634 1241 aa12.52□□□□□ -0.4
FAM78A-201ENST00000247295 UBXN2AP68543 259 aa12.52□□□□□ -0.4
FAM78A-201ENST00000247295 RBM6P78332 1123 aaKnown RBP12.52□□□□□ -0.4
FAM78A-201ENST00000247295 TBC1D10BQ4KMP7 808 aaPredicted RBP12.52□□□□□ -0.4
FAM78A-201ENST00000247295 VWA3BQ502W6 1294 aa12.52□□□□□ -0.4
FAM78A-201ENST00000247295 SPATA24Q86W54 205 aa12.52□□□□□ -0.4
FAM78A-201ENST00000247295 IFT74Q96LB3 600 aa12.52□□□□□ -0.4
FAM78A-201ENST00000247295 DBNDD1Q9H9R9 158 aa12.52□□□□□ -0.4
FAM78A-201ENST00000247295 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.52□□□□□ -0.4
FAM78A-201ENST00000247295 RCOR1Q9UKL0 485 aa12.52□□□□□ -0.4
FAM78A-201ENST00000247295 H7C1W4 665 aa12.52□□□□□ -0.41
FAM78A-201ENST00000247295 TUBB2AQ13885 445 aa12.52□□□□□ -0.41
FAM78A-201ENST00000247295 SNCBQ16143 134 aa12.52□□□□□ -0.41
FAM78A-201ENST00000247295 SEL1L2Q5TEA6 688 aa12.52□□□□□ -0.41
FAM78A-201ENST00000247295 TUBB2BQ9BVA1 445 aa12.52□□□□□ -0.41
FAM78A-201ENST00000247295 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.52□□□□□ -0.41
FAM78A-201ENST00000247295 TMOD4Q9NZQ9 345 aa12.52□□□□□ -0.41
FAM78A-201ENST00000247295 SAR1BQ9Y6B6 198 aa12.52□□□□□ -0.41
FAM78A-201ENST00000247295 TMEM232C9JQI7 657 aa12.52□□□□□ -0.41
FAM78A-201ENST00000247295 NOP56O00567 594 aaKnown RBP12.52□□□□□ -0.41
FAM78A-201ENST00000247295 DAAM2Q86T65 1068 aa12.52□□□□□ -0.41
FAM78A-201ENST00000247295 MYOCDQ8IZQ8 938 aa12.52□□□□□ -0.41
FAM78A-201ENST00000247295 MYO1AQ9UBC5 1043 aa12.52□□□□□ -0.41
FAM78A-201ENST00000247295 USTQ9Y2C2 406 aa12.52□□□□□ -0.41
FAM78A-201ENST00000247295 A0A1W2PQ27 194 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 A0A1W2PQ64 194 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 A0A1W2PQD8 194 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 A6NNZ2 444 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 RPN1P04843 607 aaKnown RBP12.51□□□□□ -0.41
FAM78A-201ENST00000247295 WHAMMP3Q1A5X7 153 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 TUBB8Q3ZCM7 444 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 SFMBT2Q5VUG0 894 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 USP17L2Q6R6M4 530 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 VSIG1Q86XK7 387 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 NIM1KQ8IY84 436 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.51□□□□□ -0.41
FAM78A-201ENST00000247295 GJA10Q969M2 543 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 CA8P35219 290 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 SLFN13Q68D06 897 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 CCDC63Q8NA47 563 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 USP27XA6NNY8 438 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 STX10O60499 249 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 CD19P15391 556 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 CACNB1Q02641 598 aaPredicted RBP12.51□□□□□ -0.41
FAM78A-201ENST00000247295 BIRC2Q13490 618 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 KRT71Q3SY84 523 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 SPATA1Q5VX52 437 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 KCTD1Q719H9 257 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 BRINP3Q76B58 766 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 TADA2BQ86TJ2 420 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 IFT20Q8IY31 132 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 TCP11Q8WWU5 503 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 POLR3EQ9NVU0 708 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 BCS1LQ9Y276 419 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 PCDHB6Q9Y5E3 794 aa12.51□□□□□ -0.41
FAM78A-201ENST00000247295 ENC1O14682 589 aa12.5□□□□□ -0.41
FAM78A-201ENST00000247295 ATP8B1O43520 1251 aa12.5□□□□□ -0.41
FAM78A-201ENST00000247295 UAP1Q16222 522 aaPredicted RBP12.5□□□□□ -0.41
FAM78A-201ENST00000247295 KSR1Q8IVT5 923 aa12.5□□□□□ -0.41
FAM78A-201ENST00000247295 CCDC26Q8TAB7 109 aa12.5□□□□□ -0.41
FAM78A-201ENST00000247295 LSM14BQ9BX40 385 aaKnown RBP12.5□□□□□ -0.41
FAM78A-201ENST00000247295 RNF26Q9BY78 433 aaPredicted RBP12.5□□□□□ -0.41
FAM78A-201ENST00000247295 NT5C3AQ9H0P0 336 aa12.5□□□□□ -0.41
FAM78A-201ENST00000247295 BUB1O43683 1085 aa12.5□□□□□ -0.41
FAM78A-201ENST00000247295 SRGAP1Q7Z6B7 1085 aa12.5□□□□□ -0.41
FAM78A-201ENST00000247295 CACNA2D3Q8IZS8 1091 aa12.5□□□□□ -0.41
FAM78A-201ENST00000247295 STMN2Q93045 179 aa12.5□□□□□ -0.41
FAM78A-201ENST00000247295 TTC14Q96N46 770 aa12.5□□□□□ -0.41
FAM78A-201ENST00000247295 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.5□□□□□ -0.41
FAM78A-201ENST00000247295 CLTCL1P53675 1640 aa12.5□□□□□ -0.41
FAM78A-201ENST00000247295 CDC42BPAQ5VT25 1732 aa12.5□□□□□ -0.41
FAM78A-201ENST00000247295 USP17L3A6NCW0 530 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms