RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 MIPOL1Q8TD10 442 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 HVCN1Q96D96 273 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 PLEKHG2Q9H7P9 1386 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 UHRF1BP1LA0JNW5 1464 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 PLEKHG3A1L390 1219 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 MAP7Q14244 749 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 PHLDB3Q6NSJ2 640 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 SHC4Q6S5L8 630 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 RAD9BQ6WBX8 426 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 PROSER2Q86WR7 435 aaPredicted RBP10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 MB21D1Q8N884 522 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 PAGE5Q96GU1 130 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 EPN3Q9H201 632 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.5□□□□□ -0.732e-7■■■■■ 47.7
NUDCD1-201ENST00000239690 USP42Q9H9J4 1324 aaKnown RBP10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 MED23Q9ULK4 1368 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 SPOPO43791 374 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 FMNL1O95466 1100 aaPredicted RBP10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 ATP1A1P05023 1023 aaKnown RBP10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 TSPY3P0CV98 308 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 TSPY8P0CW00 308 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 GCFC2P16383 781 aaKnown RBP10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 IFNAR1P17181 557 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 NR5A1Q13285 461 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 CCDC93Q567U6 631 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 CCDC62Q6P9F0 684 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 PHLDB2Q86SQ0 1253 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 CCDC105Q8IYK2 499 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 HELBQ8NG08 1087 aaPredicted RBP10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 MMS19Q96T76 1030 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 YIPF3Q9GZM5 350 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 KCND1Q9NSA2 647 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 ASIC3Q9UHC3 531 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 HDAC9Q9UKV0 1011 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 CD2APQ9Y5K6 639 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 CDC42BPAQ5VT25 1732 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 A0A1B0GTH6 734 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 STAMBPO95630 424 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 MYCNP04198 464 aaPredicted RBP10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 TNFAIP3P21580 790 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 DHX9Q08211 1270 aaKnown RBP10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 CEP128Q6ZU80 1094 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 DHTKD1Q96HY7 919 aaPredicted RBP10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 ATP6V1G3Q96LB4 118 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 PRM3Q9NNZ6 103 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 PCDHB6Q9Y5E3 794 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 PCDHA13Q9Y5I0 950 aa10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 MYO1FO00160 1098 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 LONP1P36776 959 aaKnown RBP10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 EIF3BP55884 814 aaKnown RBP10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 GUCY1A3Q02108 690 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 SEPT2Q15019 361 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 WDR93Q6P2C0 686 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 METTL16Q86W50 562 aaKnown RBP10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 RNF168Q8IYW5 571 aaPredicted RBP10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 GBP7Q8N8V2 638 aaPredicted RBP10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 RUBCNQ92622 972 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 LSM14BQ9BX40 385 aaKnown RBP10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 GPR108Q9NPR9 543 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 LARSQ9P2J5 1176 aaKnown RBP10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 IGSF1Q8N6C5 1336 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 ABCA8O94911 1581 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 KIF3CO14782 793 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 EIF4A3P38919 411 aaKnown RBP10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 KIF11P52732 1056 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 CUL1Q13616 776 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 SLC4A8Q2Y0W8 1093 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 LRRC23Q53EV4 343 aaPredicted RBP10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 HS2ST1Q7LGA3 356 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 DYMQ7RTS9 669 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 ZNF579Q8NAF0 562 aaKnown RBP10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 UHMK1Q8TAS1 419 aaKnown RBP10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 ZNF473Q8WTR7 871 aaKnown RBP10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 CCT8L2Q96SF2 557 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 SERPINA10Q9UK55 444 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 ATP8A1Q9Y2Q0 1164 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 ADGRL3Q9HAR2 1447 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 CLTCL1P53675 1640 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 SHROOM2Q13796 1616 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 PREX2Q70Z35 1606 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 PGRMC1O00264 195 aaKnown RBP10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 HHATQ5VTY9 493 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 BICDL1Q6ZP65 573 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 VCX3BQ9H321 246 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 VCX3AQ9NNX9 186 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 AATFQ9NY61 560 aaKnown RBP eCLIP10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 FBXO3Q9UK99 471 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 LRRIQ1Q96JM4 1722 aa10.49□□□□□ -0.73
NUDCD1-201ENST00000239690 NBPF10Q6P3W6 841 aaKnown RBP10.48□□□□□ -0.73
NUDCD1-201ENST00000239690 TRIM65Q6PJ69 517 aa10.48□□□□□ -0.73
NUDCD1-201ENST00000239690 EPSTI1Q96J88 318 aa10.48□□□□□ -0.73
NUDCD1-201ENST00000239690 THAP9Q9H5L6 903 aa10.48□□□□□ -0.73
NUDCD1-201ENST00000239690 ARHGEF40Q8TER5 1519 aa10.48□□□□□ -0.73
NUDCD1-201ENST00000239690 LGALS16A8MUM7 142 aa10.48□□□□□ -0.73
NUDCD1-201ENST00000239690 FTCDO95954 541 aa10.48□□□□□ -0.73
NUDCD1-201ENST00000239690 H2AFZP0C0S5 128 aa10.48□□□□□ -0.73
NUDCD1-201ENST00000239690 SESN3P58005 492 aa10.48□□□□□ -0.73
NUDCD1-201ENST00000239690 PTPROQ16827 1216 aa10.48□□□□□ -0.73
NUDCD1-201ENST00000239690 PROSER3Q2NL68 480 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms