RNA–Protein interactions for RNA: ENST00000238633.6

NPC2-201, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene NPC2, Length 796 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-201ENST00000238633 NKX3-2P78367 333 aa11.31□□□□□ -0.6
NPC2-201ENST00000238633 ICA1Q05084 483 aa11.31□□□□□ -0.6
NPC2-201ENST00000238633 ACVR2BQ13705 512 aa11.31□□□□□ -0.6
NPC2-201ENST00000238633 AAK1Q2M2I8 961 aa11.31□□□□□ -0.6
NPC2-201ENST00000238633 PPP2R2DQ66LE6 453 aa11.31□□□□□ -0.6
NPC2-201ENST00000238633 MSL3Q8N5Y2 521 aaKnown RBP11.31□□□□□ -0.6
NPC2-201ENST00000238633 SSH3Q8TE77 659 aa11.31□□□□□ -0.6
NPC2-201ENST00000238633 VTI1AQ96AJ9 217 aa11.31□□□□□ -0.6
NPC2-201ENST00000238633 KATNBL1Q9H079 304 aa11.31□□□□□ -0.6
NPC2-201ENST00000238633 WNT8AQ9H1J5 351 aa11.31□□□□□ -0.6
NPC2-201ENST00000238633 DCP1AQ9NPI6 582 aaPredicted RBP11.31□□□□□ -0.6
NPC2-201ENST00000238633 PPP1R9AQ9ULJ8 1098 aa11.31□□□□□ -0.6
NPC2-201ENST00000238633 PCDHA11Q9Y5I1 949 aa11.31□□□□□ -0.6
NPC2-201ENST00000238633 MYO5AQ9Y4I1 1855 aaKnown RBP11.31□□□□□ -0.6
NPC2-201ENST00000238633 ASTN1O14525 1302 aa11.31□□□□□ -0.6
NPC2-201ENST00000238633 MAGEB6P1A0A0J9YX57 407 aa11.3□□□□□ -0.6
NPC2-201ENST00000238633 APBB1O00213 710 aa11.3□□□□□ -0.6
NPC2-201ENST00000238633 ANP32CO43423 234 aa11.3□□□□□ -0.6
NPC2-201ENST00000238633 PTGS1P23219 599 aa11.3□□□□□ -0.6
NPC2-201ENST00000238633 CCL23P55773 120 aa11.3□□□□□ -0.6
NPC2-201ENST00000238633 SKIV2LQ15477 1246 aaKnown RBP11.3□□□□□ -0.6
NPC2-201ENST00000238633 CCDC144BQ3MJ40 725 aa11.3□□□□□ -0.6
NPC2-201ENST00000238633 GNASQ5JWF2 1037 aa11.3□□□□□ -0.6
NPC2-201ENST00000238633 PCSK9Q8NBP7 692 aaKnown RBP11.3□□□□□ -0.6
NPC2-201ENST00000238633 SDR42E1Q8WUS8 393 aa11.3□□□□□ -0.6
NPC2-201ENST00000238633 NOC4LQ9BVI4 516 aaKnown RBP11.3□□□□□ -0.6
NPC2-201ENST00000238633 TRPV6Q9H1D0 765 aa11.3□□□□□ -0.6
NPC2-201ENST00000238633 HIPK3Q9H422 1215 aa11.3□□□□□ -0.6
NPC2-201ENST00000238633 BMP2KQ9NSY1 1161 aaPredicted RBP11.3□□□□□ -0.6
NPC2-201ENST00000238633 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.3□□□□□ -0.6
NPC2-201ENST00000238633 MYH1P12882 1939 aa11.3□□□□□ -0.6
NPC2-201ENST00000238633 PI4K2BG5E9Z4 385 aa11.29□□□□□ -0.6
NPC2-201ENST00000238633 BCAR3O75815 825 aa11.29□□□□□ -0.6
NPC2-201ENST00000238633 CT47B1P0C2W7 299 aaPredicted RBP11.29□□□□□ -0.6
NPC2-201ENST00000238633 EEF2P13639 858 aaKnown RBP11.29□□□□□ -0.6
NPC2-201ENST00000238633 BEX3Q00994 111 aa11.29□□□□□ -0.6
NPC2-201ENST00000238633 TTLL4Q14679 1199 aa11.29□□□□□ -0.6
NPC2-201ENST00000238633 FAM83BQ5T0W9 1011 aa11.29□□□□□ -0.6
NPC2-201ENST00000238633 AGBL1Q96MI9 1066 aa11.29□□□□□ -0.6
NPC2-201ENST00000238633 CERS4Q9HA82 394 aa11.29□□□□□ -0.6
NPC2-201ENST00000238633 ARHGEF10LQ9HCE6 1279 aa11.29□□□□□ -0.6
NPC2-201ENST00000238633 NOP58Q9Y2X3 529 aaKnown RBP11.29□□□□□ -0.6
NPC2-201ENST00000238633 SLC4A7Q9Y6M7 1214 aa11.29□□□□□ -0.6
NPC2-201ENST00000238633 CYP2D7A0A087X1C5 515 aa11.28□□□□□ -0.6
NPC2-201ENST00000238633 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.28□□□□□ -0.6
NPC2-201ENST00000238633 TCRBV5S4A2TA0A5A2 114 aa11.28□□□□□ -0.6
NPC2-201ENST00000238633 TTLL13PA6NNM8 815 aa11.28□□□□□ -0.6
NPC2-201ENST00000238633 TLR3O15455 904 aaKnown RBP11.28□□□□□ -0.6
NPC2-201ENST00000238633 PRKAB2O43741 272 aa11.28□□□□□ -0.6
NPC2-201ENST00000238633 SURF6O75683 361 aaKnown RBP11.28□□□□□ -0.6
NPC2-201ENST00000238633 CA3P07451 260 aa11.28□□□□□ -0.6
NPC2-201ENST00000238633 TRIM27P14373 513 aa11.28□□□□□ -0.6
NPC2-201ENST00000238633 PDE6AP16499 860 aa11.28□□□□□ -0.6
NPC2-201ENST00000238633 ATP2A2P16615 1042 aaKnown RBP11.28□□□□□ -0.6
NPC2-201ENST00000238633 ATP8B2P98198 1209 aa11.28□□□□□ -0.6
NPC2-201ENST00000238633 ASTLQ6HA08 431 aaPredicted RBP11.28□□□□□ -0.6
NPC2-201ENST00000238633 CXCL17Q6UXB2 119 aa11.28□□□□□ -0.6
NPC2-201ENST00000238633 SPRED2Q7Z698 418 aa11.28□□□□□ -0.6
NPC2-201ENST00000238633 LCORLQ8N3X6 602 aa11.28□□□□□ -0.6
NPC2-201ENST00000238633 SCLYQ96I15 445 aa11.28□□□□□ -0.6
NPC2-201ENST00000238633 NUP88Q99567 741 aaPredicted RBP11.28□□□□□ -0.6
NPC2-201ENST00000238633 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
NPC2-201ENST00000238633 CRNKL1Q9BZJ0 848 aaKnown RBP11.28□□□□□ -0.6
NPC2-201ENST00000238633 MTIF3Q9H2K0 278 aaKnown RBP11.28□□□□□ -0.6
NPC2-201ENST00000238633 SWAP70Q9UH65 585 aa11.28□□□□□ -0.6
NPC2-201ENST00000238633 COG5Q9UP83 839 aa11.28□□□□□ -0.6
NPC2-201ENST00000238633 BRWD1Q9NSI6 2320 aa11.27□□□□□ -0.6
NPC2-201ENST00000238633 ZNFX1Q9P2E3 1918 aaKnown RBP11.27□□□□□ -0.6
NPC2-201ENST00000238633 B4GALT4O60513 344 aa11.27□□□□□ -0.61
NPC2-201ENST00000238633 COPB2P35606 906 aa11.27□□□□□ -0.61
NPC2-201ENST00000238633 CDK8P49336 464 aa11.27□□□□□ -0.61
NPC2-201ENST00000238633 OS9Q13438 667 aaPredicted RBP11.27□□□□□ -0.61
NPC2-201ENST00000238633 SLFNL1Q499Z3 407 aa11.27□□□□□ -0.61
NPC2-201ENST00000238633 SNRNP48Q6IEG0 339 aaKnown RBP11.27□□□□□ -0.61
NPC2-201ENST00000238633 TMED8Q6PL24 325 aaPredicted RBP11.27□□□□□ -0.61
NPC2-201ENST00000238633 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.27□□□□□ -0.61
NPC2-201ENST00000238633 DDX11Q96FC9 970 aa11.27□□□□□ -0.61
NPC2-201ENST00000238633 TEX13BQ9BXU2 312 aa11.27□□□□□ -0.61
NPC2-201ENST00000238633 ABHD16BQ9H3Z7 469 aa11.27□□□□□ -0.61
NPC2-201ENST00000238633 SH2D4AQ9H788 454 aa11.27□□□□□ -0.61
NPC2-201ENST00000238633 TRIOO75962 3097 aa11.27□□□□□ -0.61
NPC2-201ENST00000238633 ATMINO43313 823 aaPredicted RBP11.26□□□□□ -0.61
NPC2-201ENST00000238633 LPXNO60711 386 aa11.26□□□□□ -0.61
NPC2-201ENST00000238633 TAP1Q03518 808 aa11.26□□□□□ -0.61
NPC2-201ENST00000238633 ITGA7Q13683 1181 aa11.26□□□□□ -0.61
NPC2-201ENST00000238633 TMEM63BQ5T3F8 832 aa11.26□□□□□ -0.61
NPC2-201ENST00000238633 SLC9C2Q5TAH2 1124 aa11.26□□□□□ -0.61
NPC2-201ENST00000238633 ARMCX2Q7L311 632 aa11.26□□□□□ -0.61
NPC2-201ENST00000238633 CCDC144CPQ8IYA2 1237 aa11.26□□□□□ -0.61
NPC2-201ENST00000238633 HS6ST3Q8IZP7 471 aa11.26□□□□□ -0.61
NPC2-201ENST00000238633 HLA-CQ95604 372 aa11.26□□□□□ -0.61
NPC2-201ENST00000238633 SPC25Q9HBM1 224 aa11.26□□□□□ -0.61
NPC2-201ENST00000238633 GNEQ9Y223 722 aaKnown RBP11.26□□□□□ -0.61
NPC2-201ENST00000238633 DDX49Q9Y6V7 483 aaKnown RBP11.26□□□□□ -0.61
NPC2-201ENST00000238633 ZNF532Q9HCE3 1301 aa11.26□□□□□ -0.61
NPC2-201ENST00000238633 ZBBXA8MT70 800 aa11.25□□□□□ -0.61
NPC2-201ENST00000238633 ATP2A1O14983 1001 aa11.25□□□□□ -0.61
NPC2-201ENST00000238633 PSMC6P62333 389 aa11.25□□□□□ -0.61
NPC2-201ENST00000238633 CNTN2Q02246 1040 aa11.25□□□□□ -0.61
NPC2-201ENST00000238633 GRB10Q13322 594 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms