RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 PBXIP1Q96AQ6 731 aa11.73□□□□□ -0.53
NDUFB3-201ENST00000237889 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.73□□□□□ -0.53
NDUFB3-201ENST00000237889 ZNF236Q9UL36 1845 aa11.73□□□□□ -0.53
NDUFB3-201ENST00000237889 PA2G4Q9UQ80 394 aaKnown RBP11.73□□□□□ -0.53
NDUFB3-201ENST00000237889 CTDP1Q9Y5B0 961 aaPredicted RBP11.73□□□□□ -0.53
NDUFB3-201ENST00000237889 ZDBF2Q9HCK1 2354 aa11.72□□□□□ -0.53
NDUFB3-201ENST00000237889 A0A1W2PRG0 241 aa11.72□□□□□ -0.53
NDUFB3-201ENST00000237889 TNFAIP2Q03169 654 aa11.72□□□□□ -0.53
NDUFB3-201ENST00000237889 FSCN1Q16658 493 aaKnown RBP11.72□□□□□ -0.53
NDUFB3-201ENST00000237889 CCDC158Q5M9N0 1113 aa11.72□□□□□ -0.53
NDUFB3-201ENST00000237889 EP400NLQ6ZTU2 488 aa11.72□□□□□ -0.53
NDUFB3-201ENST00000237889 SPICE1Q8N0Z3 855 aa11.72□□□□□ -0.53
NDUFB3-201ENST00000237889 PRSS33Q8NF86 280 aa11.72□□□□□ -0.53
NDUFB3-201ENST00000237889 ATOH1Q92858 354 aaPredicted RBP11.72□□□□□ -0.53
NDUFB3-201ENST00000237889 AGBL1Q96MI9 1066 aa11.72□□□□□ -0.53
NDUFB3-201ENST00000237889 TGS1Q96RS0 853 aaKnown RBP11.72□□□□□ -0.53
NDUFB3-201ENST00000237889 ADAMTS5Q9UNA0 930 aa11.72□□□□□ -0.53
NDUFB3-201ENST00000237889 WDFY4Q6ZS81 3184 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 TRANK1O15050 2925 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 VWA5AO00534 786 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 NCK2O43639 380 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 CYP7A1P22680 504 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 SHMT1P34896 483 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 MCAMP43121 646 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 BEX3Q00994 111 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 ZP2Q05996 745 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 TMED8Q6PL24 325 aaPredicted RBP11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 NEK9Q8TD19 979 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 GDPD5Q8WTR4 605 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 EDAQ92838 391 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 TEX13BQ9BXU2 312 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 ALDH8A1Q9H2A2 487 aaPredicted RBP11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 VCPKMTQ9H867 229 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 SUGCTQ9HAC7 445 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 TMX2Q9Y320 296 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 REV3LO60673 3130 aa11.71□□□□□ -0.53
NDUFB3-201ENST00000237889 CACNA1FO60840 1977 aa11.7□□□□□ -0.54
NDUFB3-201ENST00000237889 GUCY1A2P33402 732 aa11.7□□□□□ -0.54
NDUFB3-201ENST00000237889 IRX5P78411 483 aaPredicted RBP11.7□□□□□ -0.54
NDUFB3-201ENST00000237889 HERC4Q5GLZ8 1057 aaPredicted RBP11.7□□□□□ -0.54
NDUFB3-201ENST00000237889 TTC39AQ5SRH9 613 aa11.7□□□□□ -0.54
NDUFB3-201ENST00000237889 ANKRD35Q8N283 1001 aa11.7□□□□□ -0.54
NDUFB3-201ENST00000237889 RAD9AQ99638 391 aa11.7□□□□□ -0.54
NDUFB3-201ENST00000237889 SALL2Q9Y467 1007 aaPredicted RBP11.7□□□□□ -0.54
NDUFB3-201ENST00000237889 MYH13Q9UKX3 1938 aa11.7□□□□□ -0.54
NDUFB3-201ENST00000237889 ATAD5Q96QE3 1844 aa11.7□□□□□ -0.54
NDUFB3-201ENST00000237889 TNKSO95271 1327 aa11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 ZFHX2Q9C0A1 2572 aaPredicted RBP11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 H3BQ06 376 aaPredicted RBP11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 DYNC1LI2O43237 492 aaPredicted RBP11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 ID4P47928 161 aa11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 ERVK-21P61565 698 aa11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 DYNLL1P63167 89 aaKnown RBP11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 BFSP2Q13515 415 aa11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 CCDC184Q52MB2 194 aa11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 IER5LQ5T953 404 aa11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 ADGRA1Q86SQ6 560 aa11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 TLK2Q86UE8 772 aa11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 GOPCQ9HD26 462 aa11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 GPHNQ9NQX3 736 aaPredicted RBP11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 SNRKQ9NRH2 765 aa11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 SWAP70Q9UH65 585 aa11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 FBXO40Q9UH90 709 aa11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 ZNF214Q9UL59 606 aaPredicted RBP11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 MTUS1Q9ULD2 1270 aa11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 PPP1R9AQ9ULJ8 1098 aa11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 Q9Y3F1 56 aa11.69□□□□□ -0.54
NDUFB3-201ENST00000237889 CFAP54Q96N23 3096 aa11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 PTPRZ1P23471 2315 aaPredicted RBP11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 DNAJC25-GNG10A0A024R161 153 aa11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 IQCF3P0C7M6 154 aa11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 CYP2C9P11712 490 aa11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 IRS1P35568 1242 aa11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 SLC4A3P48751 1232 aa11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 PLCD1P51178 756 aa11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 ICA1Q05084 483 aa11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 G3BP1Q13283 466 aaKnown RBP eCLIP11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 LRRFIP1Q32MZ4 808 aaKnown RBP11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 TIGD5Q53EQ6 642 aa11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 SNRNP48Q6IEG0 339 aaKnown RBP11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 TRIM67Q6ZTA4 783 aa11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 ARMCX2Q7L311 632 aa11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 MRPL50Q8N5N7 158 aaKnown RBP11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 PABPC5Q96DU9 382 aaKnown RBP11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 MRPL38Q96DV4 380 aaKnown RBP11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 MUTYHQ9UIF7 546 aa11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 NOD1Q9Y239 953 aa11.68□□□□□ -0.54
NDUFB3-201ENST00000237889 GRIN2DO15399 1336 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 TMEM221A6NGB7 291 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 ASB14A6NK59 587 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 M0R296 226 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 CTAGE5O15320 804 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 SRGAP3O43295 1099 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 RAD21O60216 631 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 EFCAB14O75071 495 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 ZBED4O75132 1171 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 ARHGEF15O94989 841 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 NUBP1P53384 320 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 TCF15Q12870 199 aa11.67□□□□□ -0.54
NDUFB3-201ENST00000237889 BRDTQ58F21 947 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms