RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 C20orf194Q5TEA3 1177 aa6.84□□□□□ -1.32
AFP-201ENST00000226359 CTU1Q7Z7A3 348 aaKnown RBP6.84□□□□□ -1.32
AFP-201ENST00000226359 TMEM87AQ8NBN3 555 aa6.84□□□□□ -1.32
AFP-201ENST00000226359 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.84□□□□□ -1.327e-50■□□□□ 9.8
AFP-201ENST00000226359 NSUN4Q96CB9 384 aaKnown RBP6.84□□□□□ -1.32
AFP-201ENST00000226359 TEPSINQ96N21 525 aa6.84□□□□□ -1.32
AFP-201ENST00000226359 ZIC5Q96T25 663 aa6.84□□□□□ -1.32
AFP-201ENST00000226359 ZFYVE28Q9HCC9 887 aa6.84□□□□□ -1.32
AFP-201ENST00000226359 BRPF3Q9ULD4 1205 aa6.84□□□□□ -1.32
AFP-201ENST00000226359 AOX1Q06278 1338 aa6.83□□□□□ -1.32
AFP-201ENST00000226359 CEP350Q5VT06 3117 aa6.83□□□□□ -1.32
AFP-201ENST00000226359 ECM29Q5VYK3 1845 aa6.83□□□□□ -1.32
AFP-201ENST00000226359 GPR75-ASB3A0A0A6YYF3 556 aa6.83□□□□□ -1.32
AFP-201ENST00000226359 ANKRD62A6NC57 917 aa6.83□□□□□ -1.32
AFP-201ENST00000226359 LILRA1O75019 489 aa6.83□□□□□ -1.32
AFP-201ENST00000226359 MYCP01106 439 aaPredicted RBP6.83□□□□□ -1.32
AFP-201ENST00000226359 CYP7A1P22680 504 aa6.83□□□□□ -1.32
AFP-201ENST00000226359 ADD1P35611 737 aaKnown RBP6.83□□□□□ -1.32
AFP-201ENST00000226359 ZAP70P43403 619 aa6.83□□□□□ -1.32
AFP-201ENST00000226359 USP5P45974 858 aa6.83□□□□□ -1.32
AFP-201ENST00000226359 KIF22Q14807 665 aa6.83□□□□□ -1.32
AFP-201ENST00000226359 PKN2Q16513 984 aaKnown RBP6.83□□□□□ -1.32
AFP-201ENST00000226359 LRRFIP1Q32MZ4 808 aaKnown RBP6.83□□□□□ -1.32
AFP-201ENST00000226359 CRACR2BQ8N4Y2 399 aaPredicted RBP6.83□□□□□ -1.32
AFP-201ENST00000226359 DHX38Q92620 1227 aaKnown RBP6.83□□□□□ -1.32
AFP-201ENST00000226359 ERO1AQ96HE7 468 aa6.83□□□□□ -1.32
AFP-201ENST00000226359 LRRCC1Q9C099 1032 aa6.83□□□□□ -1.32
AFP-201ENST00000226359 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.83□□□□□ -1.32
AFP-201ENST00000226359 IL1RAPL2Q9NP60 686 aa6.83□□□□□ -1.32
AFP-201ENST00000226359 DBNLQ9UJU6 430 aaKnown RBP6.83□□□□□ -1.32
AFP-201ENST00000226359 FZD1Q9UP38 647 aa6.83□□□□□ -1.32
AFP-201ENST00000226359 MYH13Q9UKX3 1938 aa6.83□□□□□ -1.32
AFP-201ENST00000226359 PPATQ06203 517 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 DHX9Q08211 1270 aaKnown RBP6.82□□□□□ -1.32
AFP-201ENST00000226359 NFIAQ12857 509 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 TAF1CQ15572 869 aaPredicted RBP6.82□□□□□ -1.32
AFP-201ENST00000226359 NOL9Q5SY16 702 aaKnown RBP6.82□□□□□ -1.32
AFP-201ENST00000226359 ZSCAN25Q6NSZ9 544 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 PI16Q6UXB8 463 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 MIGA2Q7L4E1 593 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 AMOTL1Q8IY63 956 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.82□□□□□ -1.32
AFP-201ENST00000226359 EAF2Q96CJ1 260 aaPredicted RBP6.82□□□□□ -1.32
AFP-201ENST00000226359 CRBNQ96SW2 442 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 TINF2Q9BSI4 451 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 DHX36Q9H2U1 1008 aaKnown RBP6.82□□□□□ -1.32
AFP-201ENST00000226359 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.82□□□□□ -1.32
AFP-201ENST00000226359 SENP2Q9HC62 589 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 ZCCHC17Q9NP64 241 aaKnown RBP6.82□□□□□ -1.32
AFP-201ENST00000226359 DACH1Q9UI36 760 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 SNCAIPQ9Y6H5 919 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 GPR25O00155 361 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 TBC1D8O95759 1140 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 MPSTP25325 297 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 AAMPQ13685 434 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.82□□□□□ -1.32
AFP-201ENST00000226359 SCYL3Q8IZE3 742 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 HELQQ8TDG4 1101 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 ITPKCQ96DU7 683 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 ABHD8Q96I13 439 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 CFHR5Q9BXR6 569 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 KRTAP4-8Q9BYQ9 185 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 LNPKQ9C0E8 428 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 MCOLN1Q9GZU1 580 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 OSBPL5Q9H0X9 879 aaPredicted RBP6.82□□□□□ -1.32
AFP-201ENST00000226359 AS3MTQ9HBK9 375 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 AATFQ9NY61 560 aaKnown RBP eCLIP6.82□□□□□ -1.32
AFP-201ENST00000226359 TLR7Q9NYK1 1049 aaKnown RBP6.82□□□□□ -1.32
AFP-201ENST00000226359 PARP2Q9UGN5 583 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 HERC5Q9UII4 1024 aaKnown RBP6.82□□□□□ -1.32
AFP-201ENST00000226359 WASF2Q9Y6W5 498 aa6.82□□□□□ -1.32
AFP-201ENST00000226359 COL2A1P02458 1487 aaPredicted RBP6.81□□□□□ -1.32
AFP-201ENST00000226359 CTNND1O60716 968 aaKnown RBP6.81□□□□□ -1.32
AFP-201ENST00000226359 CYP2E1P05181 493 aaPredicted RBP6.81□□□□□ -1.32
AFP-201ENST00000226359 MAPK8P45983 427 aa6.81□□□□□ -1.32
AFP-201ENST00000226359 KCNMA1Q12791 1236 aa6.81□□□□□ -1.32
AFP-201ENST00000226359 CBLBQ13191 982 aa6.81□□□□□ -1.32
AFP-201ENST00000226359 PABPC4Q13310 644 aaKnown RBP eCLIP6.81□□□□□ -1.32
AFP-201ENST00000226359 FASTKD5Q7L8L6 764 aaKnown RBP6.81□□□□□ -1.32
AFP-201ENST00000226359 MAGEB6Q8N7X4 407 aa6.81□□□□□ -1.32
AFP-201ENST00000226359 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.81□□□□□ -1.32
AFP-201ENST00000226359 SNIP1Q8TAD8 396 aaKnown RBP6.81□□□□□ -1.32
AFP-201ENST00000226359 ZKSCAN4Q969J2 545 aaPredicted RBP6.81□□□□□ -1.32
AFP-201ENST00000226359 PARK7Q99497 189 aaKnown RBP6.81□□□□□ -1.32
AFP-201ENST00000226359 DUSP9Q99956 384 aaKnown RBP6.81□□□□□ -1.32
AFP-201ENST00000226359 RBCK1Q9BYM8 510 aa6.81□□□□□ -1.32
AFP-201ENST00000226359 CRNKL1Q9BZJ0 848 aaKnown RBP6.81□□□□□ -1.32
AFP-201ENST00000226359 RAB6BQ9NRW1 208 aa6.81□□□□□ -1.32
AFP-201ENST00000226359 ZNF112Q9UJU3 913 aa6.81□□□□□ -1.32
AFP-201ENST00000226359 RFX7Q2KHR2 1363 aa6.8□□□□□ -1.32
AFP-201ENST00000226359 ATRNL1Q5VV63 1379 aa6.8□□□□□ -1.32
AFP-201ENST00000226359 MAST2Q6P0Q8 1798 aa6.8□□□□□ -1.32
AFP-201ENST00000226359 TTC24A2A3L6 582 aaPredicted RBP6.8□□□□□ -1.32
AFP-201ENST00000226359 CCDC85CA6NKD9 419 aa6.8□□□□□ -1.32
AFP-201ENST00000226359 TMEM229AB2RXF0 380 aa6.8□□□□□ -1.32
AFP-201ENST00000226359 GOLIM4O00461 696 aa6.8□□□□□ -1.32
AFP-201ENST00000226359 CXCL11O14625 94 aa6.8□□□□□ -1.32
AFP-201ENST00000226359 ERC2O15083 957 aa6.8□□□□□ -1.32
AFP-201ENST00000226359 TREHO43280 583 aa6.8□□□□□ -1.32
AFP-201ENST00000226359 INPP5BP32019 993 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms