RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 DDX60LQ5H9U9 1706 aaKnown RBP28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 AKR1B15C9JRZ8 316 aaPredicted RBP28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 CALML3P27482 149 aa28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 KIF5BP33176 963 aa28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 RBM5P52756 815 aaKnown RBP eCLIP28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 CCDC178Q5BJE1 867 aa28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 ARL6IP4Q66PJ3 421 aaKnown RBP28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 CDC42EP5Q6NZY7 148 aa28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 USP49Q70CQ1 688 aa28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 IQUBQ8NA54 791 aa28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 MNS1Q8NEH6 495 aa28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 AGBL3Q8NEM8 1001 aa28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 UBXN4Q92575 508 aa28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 MED15Q96RN5 788 aa28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 ZBTB12Q9Y330 459 aaPredicted RBP28.18■■■□□ 2.1
RUNDC3A-201ENST00000225441 FOCADQ5VW36 1801 aa28.17■■■□□ 2.1
RUNDC3A-201ENST00000225441 PLEKHA8P1O95397 391 aa28.17■■■□□ 2.1
RUNDC3A-201ENST00000225441 ATP2B1P20020 1258 aa28.17■■■□□ 2.1
RUNDC3A-201ENST00000225441 NPY5RQ15761 445 aa28.17■■■□□ 2.1
RUNDC3A-201ENST00000225441 C12orf60Q5U649 245 aa28.17■■■□□ 2.1
RUNDC3A-201ENST00000225441 ARHGAP27Q6ZUM4 889 aa28.17■■■□□ 2.1
RUNDC3A-201ENST00000225441 PCDHAC2Q9Y5I4 1007 aa28.17■■■□□ 2.1
RUNDC3A-201ENST00000225441 ITIH6Q6UXX5 1313 aa28.17■■■□□ 2.1
RUNDC3A-201ENST00000225441 SYNRGQ9UMZ2 1314 aa28.17■■■□□ 2.1
RUNDC3A-201ENST00000225441 ATP8B1O43520 1251 aa28.16■■■□□ 2.1
RUNDC3A-201ENST00000225441 SCG2P13521 617 aa28.16■■■□□ 2.1
RUNDC3A-201ENST00000225441 TNIP1Q15025 636 aa28.16■■■□□ 2.1
RUNDC3A-201ENST00000225441 AMOTL1Q8IY63 956 aa28.16■■■□□ 2.1
RUNDC3A-201ENST00000225441 SAMSN1Q9NSI8 373 aaKnown RBP28.16■■■□□ 2.1
RUNDC3A-201ENST00000225441 CASQ1P31415 396 aa28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 PBX1P40424 430 aa28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 EVX2Q03828 476 aa28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 SPAG1Q07617 926 aa28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 PFKFB3Q16875 520 aaPredicted RBP28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 ERCC6LQ2NKX8 1250 aa28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 APTXQ7Z2E3 356 aaKnown RBP28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 GRAMD1CQ8IYS0 662 aa28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 PKNOX2Q96KN3 472 aa28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 PRDM10Q9NQV6 1147 aa28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 HDAC9Q9UKV0 1011 aa28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 TUBB2AQ13885 445 aa28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 PPFIBP1Q86W92 1011 aa28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 EPSTI1Q96J88 318 aa28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 TUBB2BQ9BVA1 445 aa28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 RMND1Q9NWS8 449 aa28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 ADD3Q9UEY8 706 aaKnown RBP28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 SAP30BPQ9UHR5 308 aaKnown RBP28.15■■■□□ 2.1
RUNDC3A-201ENST00000225441 TADA3O75528 432 aa28.14■■■□□ 2.1
RUNDC3A-201ENST00000225441 MAP3K9P80192 1104 aa28.14■■■□□ 2.1
RUNDC3A-201ENST00000225441 TRMT44Q8IYL2 757 aaKnown RBP28.14■■■□□ 2.1
RUNDC3A-201ENST00000225441 ANKS1AQ92625 1134 aa28.14■■■□□ 2.1
RUNDC3A-201ENST00000225441 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.14■■■□□ 2.1
RUNDC3A-201ENST00000225441 V9GYY5 206 aaPredicted RBP28.14■■■□□ 2.1
RUNDC3A-201ENST00000225441 ROBO3Q96MS0 1386 aa28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 A0A087X0B3 334 aa28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 PPP1R3GB7ZBB8 358 aa28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 FZD9O00144 591 aa28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 URI1O94763 535 aaPredicted RBP28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 EARS2Q5JPH6 523 aaKnown RBP28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 LRRC10BA6NIK2 292 aa28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 GTPBP6O43824 516 aaPredicted RBP28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 CCDC175P0C221 793 aa28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 FECHP22830 423 aa28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 TUBB4BP68371 445 aa28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 PTGDRQ13258 359 aa28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 PICALMQ13492 652 aa28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 E2F4Q16254 413 aa28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 SLC4A8Q2Y0W8 1093 aa28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 OGFOD1Q8N543 542 aa28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 SRBD1Q8N5C6 995 aaKnown RBP28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 DDX4Q9NQI0 724 aaKnown RBP28.13■■■□□ 2.09
RUNDC3A-201ENST00000225441 FAM205CA6NFA0 338 aa28.12■■■□□ 2.09
RUNDC3A-201ENST00000225441 LONP1P36776 959 aaKnown RBP28.12■■■□□ 2.09
RUNDC3A-201ENST00000225441 GNAQP50148 359 aa28.12■■■□□ 2.09
RUNDC3A-201ENST00000225441 EIF6P56537 245 aaKnown RBP28.12■■■□□ 2.09
RUNDC3A-201ENST00000225441 ARHGAP29Q52LW3 1261 aa28.12■■■□□ 2.09
RUNDC3A-201ENST00000225441 DGKHQ86XP1 1220 aa28.12■■■□□ 2.09
RUNDC3A-201ENST00000225441 PRDM1O75626 825 aa28.11■■■□□ 2.09
RUNDC3A-201ENST00000225441 NLRP5P59047 1200 aa28.11■■■□□ 2.09
RUNDC3A-201ENST00000225441 ZNF174Q15697 407 aa28.11■■■□□ 2.09
RUNDC3A-201ENST00000225441 GALNT17Q6IS24 598 aa28.11■■■□□ 2.09
RUNDC3A-201ENST00000225441 CNGA4Q8IV77 575 aa28.11■■■□□ 2.09
RUNDC3A-201ENST00000225441 LMNB1P20700 586 aa28.11■■■□□ 2.09
RUNDC3A-201ENST00000225441 AFMP43652 599 aa28.11■■■□□ 2.09
RUNDC3A-201ENST00000225441 GNG11P61952 73 aa28.11■■■□□ 2.09
RUNDC3A-201ENST00000225441 TRIM14Q14142 442 aa28.11■■■□□ 2.09
RUNDC3A-201ENST00000225441 LIMA1Q9UHB6 759 aaKnown RBP28.11■■■□□ 2.09
RUNDC3A-201ENST00000225441 RWDD2AQ9UIY3 292 aa28.11■■■□□ 2.09
RUNDC3A-201ENST00000225441 ADKP55263 362 aaKnown RBP28.1■■■□□ 2.09
RUNDC3A-201ENST00000225441 ANKRD20A12PQ8NF67 263 aa28.1■■■□□ 2.09
RUNDC3A-201ENST00000225441 MYH1P12882 1939 aa28.1■■■□□ 2.09
RUNDC3A-201ENST00000225441 MYL1P05976 194 aa28.09■■■□□ 2.09
RUNDC3A-201ENST00000225441 YBX3P16989 372 aaKnown RBP eCLIP28.09■■■□□ 2.09
RUNDC3A-201ENST00000225441 RPS12P25398 132 aaKnown RBP28.09■■■□□ 2.09
RUNDC3A-201ENST00000225441 TXLNAP40222 546 aa28.09■■■□□ 2.09
RUNDC3A-201ENST00000225441 IGSF22Q8N9C0 903 aa28.09■■■□□ 2.09
RUNDC3A-201ENST00000225441 PRMT6Q96LA8 375 aaPredicted RBP28.09■■■□□ 2.09
RUNDC3A-201ENST00000225441 IDI2Q9BXS1 227 aa28.09■■■□□ 2.09
RUNDC3A-201ENST00000225441 SPDYE2BA6NHP3 402 aa28.08■■■□□ 2.09
RUNDC3A-201ENST00000225441 SPDYE6P0CI01 402 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms