RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 CALML3P27482 149 aa17.21■□□□□ 0.35
TGFB1-201ENST00000221930 COPB1P53618 953 aaKnown RBP17.21■□□□□ 0.35
TGFB1-201ENST00000221930 HNRNPH2P55795 449 aaKnown RBP17.21■□□□□ 0.35
TGFB1-201ENST00000221930 ERVK-24P63145 666 aa17.21■□□□□ 0.35
TGFB1-201ENST00000221930 INF2Q27J81 1249 aa17.21■□□□□ 0.35
TGFB1-201ENST00000221930 C12orf60Q5U649 245 aa17.21■□□□□ 0.35
TGFB1-201ENST00000221930 HEATR3Q7Z4Q2 680 aa17.21■□□□□ 0.35
TGFB1-201ENST00000221930 GPR161Q8N6U8 529 aaKnown RBP17.21■□□□□ 0.35
TGFB1-201ENST00000221930 PARD6BQ9BYG5 372 aa17.21■□□□□ 0.35
TGFB1-201ENST00000221930 UTRNP46939 3433 aa17.21■□□□□ 0.35
TGFB1-201ENST00000221930 CCDC88AQ3V6T2 1871 aa17.21■□□□□ 0.34
TGFB1-201ENST00000221930 DLEC1Q9Y238 1755 aa17.2■□□□□ 0.34
TGFB1-201ENST00000221930 CCDC194A0A1B0GVG4 234 aa17.2■□□□□ 0.34
TGFB1-201ENST00000221930 LRRC10BA6NIK2 292 aa17.2■□□□□ 0.34
TGFB1-201ENST00000221930 CYTH3O43739 400 aa17.2■□□□□ 0.34
TGFB1-201ENST00000221930 SASH3O75995 380 aa17.2■□□□□ 0.34
TGFB1-201ENST00000221930 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.2■□□□□ 0.348e-8■■■■■ 36.9
TGFB1-201ENST00000221930 ABHD10Q9NUJ1 306 aa17.2■□□□□ 0.34
TGFB1-201ENST00000221930 LIMA1Q9UHB6 759 aaKnown RBP17.2■□□□□ 0.34
TGFB1-201ENST00000221930 MAD2L2Q9UI95 211 aa17.2■□□□□ 0.34
TGFB1-201ENST00000221930 PES1O00541 588 aaKnown RBP17.2■□□□□ 0.34
TGFB1-201ENST00000221930 TPM1P09493 284 aa17.2■□□□□ 0.34
TGFB1-201ENST00000221930 CYP2C19P33261 490 aa17.2■□□□□ 0.34
TGFB1-201ENST00000221930 LONP1P36776 959 aaKnown RBP17.2■□□□□ 0.34
TGFB1-201ENST00000221930 TXLNAP40222 546 aa17.2■□□□□ 0.34
TGFB1-201ENST00000221930 NAALADL2Q58DX5 795 aa17.2■□□□□ 0.34
TGFB1-201ENST00000221930 ARL6IP4Q66PJ3 421 aaKnown RBP17.2■□□□□ 0.34
TGFB1-201ENST00000221930 TGFBRAP1Q8WUH2 860 aa17.2■□□□□ 0.34
TGFB1-201ENST00000221930 RASSF4Q9H2L5 321 aa17.2■□□□□ 0.34
TGFB1-201ENST00000221930 DISC1Q9NRI5 854 aa17.2■□□□□ 0.34
TGFB1-201ENST00000221930 MKRN1Q9UHC7 482 aaKnown RBP17.2■□□□□ 0.34
TGFB1-201ENST00000221930 SAP30BPQ9UHR5 308 aaKnown RBP17.2■□□□□ 0.34
TGFB1-201ENST00000221930 MYH8P13535 1937 aa17.19■□□□□ 0.34
TGFB1-201ENST00000221930 TSPY3P0CV98 308 aa17.19■□□□□ 0.34
TGFB1-201ENST00000221930 TSPY8P0CW00 308 aa17.19■□□□□ 0.34
TGFB1-201ENST00000221930 TM4SF1P30408 202 aa17.19■□□□□ 0.34
TGFB1-201ENST00000221930 PMS1P54277 932 aaKnown RBP17.19■□□□□ 0.34
TGFB1-201ENST00000221930 UBXN1Q04323 297 aa17.19■□□□□ 0.34
TGFB1-201ENST00000221930 WWC2Q6AWC2 1192 aa17.19■□□□□ 0.34
TGFB1-201ENST00000221930 CC2D1AQ6P1N0 951 aaPredicted RBP17.19■□□□□ 0.34
TGFB1-201ENST00000221930 DTHD1Q6ZMT9 781 aa17.19■□□□□ 0.34
TGFB1-201ENST00000221930 LDHBP07195 334 aaKnown RBP17.19■□□□□ 0.34
TGFB1-201ENST00000221930 FAM182BQ5T319 152 aa17.19■□□□□ 0.34
TGFB1-201ENST00000221930 ICE2Q659A1 982 aa17.19■□□□□ 0.34
TGFB1-201ENST00000221930 DGKHQ86XP1 1220 aa17.19■□□□□ 0.34
TGFB1-201ENST00000221930 PCDHA6Q9UN73 950 aa17.19■□□□□ 0.34
TGFB1-201ENST00000221930 PCDHA8Q9Y5H6 950 aa17.19■□□□□ 0.34
TGFB1-201ENST00000221930 TNRC6CQ9HCJ0 1690 aaKnown RBP17.19■□□□□ 0.34
TGFB1-201ENST00000221930 POLR3GO15318 223 aaPredicted RBP17.18■□□□□ 0.34
TGFB1-201ENST00000221930 TBC1D8O95759 1140 aa17.18■□□□□ 0.34
TGFB1-201ENST00000221930 KRT9P35527 623 aa17.18■□□□□ 0.34
TGFB1-201ENST00000221930 IRF2BP1Q8IU81 584 aa17.18■□□□□ 0.34
TGFB1-201ENST00000221930 GOLGA1Q92805 767 aa17.18■□□□□ 0.34
TGFB1-201ENST00000221930 ITIH6Q6UXX5 1313 aa17.18■□□□□ 0.34
TGFB1-201ENST00000221930 NFIXQ14938 502 aa17.18■□□□□ 0.34
TGFB1-201ENST00000221930 SLC35F6Q8N357 371 aa17.18■□□□□ 0.34
TGFB1-201ENST00000221930 CEP120Q8N960 986 aa17.18■□□□□ 0.34
TGFB1-201ENST00000221930 BANK1Q8NDB2 785 aa17.18■□□□□ 0.34
TGFB1-201ENST00000221930 SLF1Q9BQI6 1058 aa17.18■□□□□ 0.34
TGFB1-201ENST00000221930 RMND1Q9NWS8 449 aa17.18■□□□□ 0.34
TGFB1-201ENST00000221930 RGPD3A6NKT7 1758 aaPredicted RBP17.18■□□□□ 0.34
TGFB1-201ENST00000221930 RGPD4Q7Z3J3 1758 aa17.18■□□□□ 0.34
TGFB1-201ENST00000221930 M0R2N6 131 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 CHMP4BP1P59074 171 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 KIF4BQ2VIQ3 1234 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 MAPKAPK5Q8IW41 473 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 ANKRD20A12PQ8NF67 263 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 LRRC15Q8TF66 581 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 TRERF1Q96PN7 1200 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 CHP1Q99653 195 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 PYM1Q9BRP8 204 aaKnown RBP17.17■□□□□ 0.34
TGFB1-201ENST00000221930 LAMB1P07942 1786 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 UBA7P41226 1012 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 TRAPPC3LQ5T215 181 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 C15orf52Q6ZUT6 534 aaKnown RBP17.17■□□□□ 0.34
TGFB1-201ENST00000221930 ZNF444Q8N0Y2 327 aaPredicted RBP17.17■□□□□ 0.34
TGFB1-201ENST00000221930 RABGGTAQ92696 567 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 ZCCHC17Q9NP64 241 aaKnown RBP17.17■□□□□ 0.34
TGFB1-201ENST00000221930 BRWD3Q6RI45 1802 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 LRRC37AA6NMS7 1700 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 PARP1P09874 1014 aaKnown RBP17.17■□□□□ 0.34
TGFB1-201ENST00000221930 SPAG1Q07617 926 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 GRM4Q14833 912 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 SPTY2D1Q68D10 685 aaPredicted RBP17.17■□□□□ 0.34
TGFB1-201ENST00000221930 FAM196AQ6ZSG2 479 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 TMTC1Q8IUR5 882 aa17.17■□□□□ 0.34
TGFB1-201ENST00000221930 ARHGEF1Q92888 912 aaKnown RBP17.17■□□□□ 0.34
TGFB1-201ENST00000221930 ADSSL1Q8N142 457 aa17.16■□□□□ 0.34
TGFB1-201ENST00000221930 CCDC51Q96ER9 411 aa17.16■□□□□ 0.34
TGFB1-201ENST00000221930 TMEM47Q9BQJ4 181 aa17.16■□□□□ 0.34
TGFB1-201ENST00000221930 ARFGAP3Q9NP61 516 aa17.16■□□□□ 0.34
TGFB1-201ENST00000221930 SH3GLB2Q9NR46 395 aa17.16■□□□□ 0.34
TGFB1-201ENST00000221930 CEP83Q9Y592 693 aa17.16■□□□□ 0.34
TGFB1-201ENST00000221930 SRGAP1Q7Z6B7 1085 aa17.16■□□□□ 0.34
TGFB1-201ENST00000221930 SEPT12Q8IYM1 358 aa17.16■□□□□ 0.34
TGFB1-201ENST00000221930 CDC23Q9UJX2 597 aa17.16■□□□□ 0.34
TGFB1-201ENST00000221930 IRS2Q9Y4H2 1338 aa17.15■□□□□ 0.34
TGFB1-201ENST00000221930 TTC26A0AVF1 554 aa17.15■□□□□ 0.34
TGFB1-201ENST00000221930 CTAGE9A4FU28 777 aa17.15■□□□□ 0.34
TGFB1-201ENST00000221930 CYP26C1Q6V0L0 522 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms