RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 GNPTABQ3T906 1256 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 SV2BQ7L1I2 683 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 VGLL2Q8N8G2 317 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 ZNF397Q8NF99 534 aaPredicted RBP10.54□□□□□ -0.72
CCDC113-201ENST00000219299 IPO4Q8TEX9 1081 aaKnown RBP10.54□□□□□ -0.72
CCDC113-201ENST00000219299 CPLX3Q8WVH0 158 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 RTEL1Q9NZ71 1219 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 IL1R1P14778 569 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 NBPF9Q3BBW0 867 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 ANO6Q4KMQ2 910 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 PNMA2Q9UL42 364 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 YEATS4O95619 227 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 MNAT1P51948 309 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 RNF187Q5TA31 235 aaPredicted RBP10.53□□□□□ -0.72
CCDC113-201ENST00000219299 GALNT17Q6IS24 598 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 ELP1O95163 1332 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 GADD45BO75293 160 aaPredicted RBP10.53□□□□□ -0.72
CCDC113-201ENST00000219299 FOSP01100 380 aaPredicted RBP10.53□□□□□ -0.72
CCDC113-201ENST00000219299 TECP42680 631 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 SBK1Q52WX2 424 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 TMTC3Q6ZXV5 915 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 FAM160B2Q86V87 743 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 GLG1Q92896 1179 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 SLC5A4Q9NY91 659 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 HMGCS2P54868 508 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 PTGDRQ13258 359 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 SPA17Q15506 151 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 CRY2Q49AN0 593 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 CACNA2D4Q7Z3S7 1137 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 FERMT2Q96AC1 680 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 MMRN2Q9H8L6 949 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 TOPAZ1Q8N9V7 1692 aa10.53□□□□□ -0.72
CCDC113-201ENST00000219299 PRPF3O43395 683 aaKnown RBP10.52□□□□□ -0.72
CCDC113-201ENST00000219299 TMC6Q7Z403 805 aa10.52□□□□□ -0.72
CCDC113-201ENST00000219299 PLA2G4DQ86XP0 818 aa10.52□□□□□ -0.72
CCDC113-201ENST00000219299 AZI2Q9H6S1 392 aa10.52□□□□□ -0.72
CCDC113-201ENST00000219299 GPBP1L1Q9HC44 474 aaPredicted RBP10.52□□□□□ -0.72
CCDC113-201ENST00000219299 AHDC1Q5TGY3 1603 aaPredicted RBP10.52□□□□□ -0.72
CCDC113-201ENST00000219299 CNGA1P29973 690 aa10.52□□□□□ -0.73
CCDC113-201ENST00000219299 HOXA13P31271 388 aaPredicted RBP10.52□□□□□ -0.73
CCDC113-201ENST00000219299 TPH2Q8IWU9 490 aa10.52□□□□□ -0.73
CCDC113-201ENST00000219299 ZDHHC15Q96MV8 337 aa10.52□□□□□ -0.73
CCDC113-201ENST00000219299 MLXIPQ9HAP2 919 aa10.52□□□□□ -0.73
CCDC113-201ENST00000219299 OGFRQ9NZT2 677 aa10.52□□□□□ -0.73
CCDC113-201ENST00000219299 MAPK8IP1Q9UQF2 711 aa10.52□□□□□ -0.73
CCDC113-201ENST00000219299 ARHGEF35A5YM69 484 aa10.52□□□□□ -0.73
CCDC113-201ENST00000219299 MAP2K1Q02750 393 aaPredicted RBP10.52□□□□□ -0.73
CCDC113-201ENST00000219299 KIF22Q14807 665 aa10.52□□□□□ -0.73
CCDC113-201ENST00000219299 EEPD1Q7L9B9 569 aa10.52□□□□□ -0.73
CCDC113-201ENST00000219299 ADGRA1Q86SQ6 560 aa10.52□□□□□ -0.73
CCDC113-201ENST00000219299 RIOK1Q9BRS2 568 aaKnown RBP10.52□□□□□ -0.73
CCDC113-201ENST00000219299 MTMR4Q9NYA4 1195 aa10.52□□□□□ -0.73
CCDC113-201ENST00000219299 N4BP3O15049 544 aa10.52□□□□□ -0.73
CCDC113-201ENST00000219299 ZNF202O95125 648 aa10.52□□□□□ -0.73
CCDC113-201ENST00000219299 UBE2SQ16763 222 aa10.52□□□□□ -0.73
CCDC113-201ENST00000219299 ELP3Q9H9T3 547 aa10.52□□□□□ -0.73
CCDC113-201ENST00000219299 NOD1Q9Y239 953 aa10.52□□□□□ -0.73
CCDC113-201ENST00000219299 SPDYE2BA6NHP3 402 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 SPDYE6P0CI01 402 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 TERF1P54274 439 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 CETN1Q12798 172 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 TSGA10IPQ3SY00 556 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 HS2ST1Q7LGA3 356 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 TBCKQ8TEA7 893 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 PCDHA4Q9UN74 947 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 PNMA6FA0A0J9YX94 578 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 EZRP15311 586 aaKnown RBP10.51□□□□□ -0.73
CCDC113-201ENST00000219299 CDC27P30260 824 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 PAFAH1B1P43034 410 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 TYRO3Q06418 890 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 DYMQ7RTS9 669 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 CABP7Q86V35 215 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 ARFGAP3Q9NP61 516 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 RRAGDQ9NQL2 400 aaPredicted RBP10.51□□□□□ -0.73
CCDC113-201ENST00000219299 DDX25Q9UHL0 483 aaKnown RBP10.51□□□□□ -0.73
CCDC113-201ENST00000219299 DNM3Q9UQ16 869 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 RASA1P20936 1047 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 PDE4DQ08499 809 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 MCTP2Q6DN12 878 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 RCSD1Q6JBY9 416 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 DHX37Q8IY37 1157 aaKnown RBP10.51□□□□□ -0.73
CCDC113-201ENST00000219299 UPF1Q92900 1129 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCDC113-201ENST00000219299 SRRTQ9BXP5 876 aaKnown RBP10.51□□□□□ -0.73
CCDC113-201ENST00000219299 SALL3Q9BXA9 1300 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 CLIC6Q96NY7 704 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 MTA3Q9BTC8 594 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 FAM205AQ6ZU69 1335 aa10.51□□□□□ -0.73
CCDC113-201ENST00000219299 CCDC169A6NNP5 214 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 SLU7O95391 586 aaKnown RBP10.5□□□□□ -0.73
CCDC113-201ENST00000219299 OR52Z1P0C646 297 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 CYP4A11Q02928 519 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 DACT2Q5SW24 774 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 CCDC65Q8IXS2 484 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 STAG2Q8N3U4 1231 aa10.5□□□□□ -0.73
CCDC113-201ENST00000219299 ZFP91Q96JP5 570 aaPredicted RBP10.5□□□□□ -0.73
CCDC113-201ENST00000219299 ZNF830Q96NB3 372 aaPredicted RBP10.5□□□□□ -0.73
CCDC113-201ENST00000219299 RTFDC1Q9BY42 306 aaPredicted RBP10.5□□□□□ -0.73
CCDC113-201ENST00000219299 FOXP1Q9H334 677 aaPredicted RBP10.5□□□□□ -0.73
CCDC113-201ENST00000219299 RAVER2Q9HCJ3 691 aaKnown RBP10.5□□□□□ -0.73
CCDC113-201ENST00000219299 CLIC4Q9Y696 253 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms