RNA–Protein interactions for RNA: ENST00000216286.9

NID2-201, Transcript of nidogen 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID2, Length 4,811 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID2-201ENST00000216286 USP28Q96RU2 1077 aa13.15□□□□□ -0.3
NID2-201ENST00000216286 MAP2P11137 1827 aaKnown RBP13.15□□□□□ -0.3
NID2-201ENST00000216286 NFIAQ12857 509 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 SNAPC2Q13487 334 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 ZNF354CQ86Y25 554 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 ZNF280CQ8ND82 737 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 TRERF1Q96PN7 1200 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 AKT3Q9Y243 479 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 TMCO5BA8MYB1 307 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 USP17L15C9J2P7 530 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 USP17L13C9JLJ4 530 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 USP17L11C9JVI0 530 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 USP17L18D6R9N7 530 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 USP17L22D6RA61 530 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 USP17L17D6RBQ6 530 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 USP17L19D6RCP7 530 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 USP17L20D6RJB6 530 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 PTGS1P23219 599 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 USP17L24Q0WX57 530 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 RAPGEF1Q13905 1077 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 RCSD1Q6JBY9 416 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 CNNM4Q6P4Q7 775 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 USP17L6PQ6QN14 398 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 ERCC4Q92889 916 aaPredicted RBP13.14□□□□□ -0.31
NID2-201ENST00000216286 KAZALD1Q96I82 304 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 USO1O60763 962 aaKnown RBP13.14□□□□□ -0.31
NID2-201ENST00000216286 IFNAR1P17181 557 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 CCND2P30279 289 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 ZSCAN23Q3MJ62 389 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 ZBTB8OSQ8IWT0 167 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 APOL6Q9BWW8 343 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 MYO6Q9UM54 1294 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 PCDHA4Q9UN74 947 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 YY1P25490 414 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 DCAF4Q8WV16 495 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 SLC7A3Q8WY07 619 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 CDHR1Q96JP9 859 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 FEM1BQ9UK73 627 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 STK24Q9Y6E0 443 aa13.14□□□□□ -0.31
NID2-201ENST00000216286 ZNF202O95125 648 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 CCDC172P0C7W6 258 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 EPB41P11171 864 aaKnown RBP13.13□□□□□ -0.31
NID2-201ENST00000216286 PRPF4BQ13523 1007 aaKnown RBP13.13□□□□□ -0.31
NID2-201ENST00000216286 HSP90AA2PQ14568 343 aaPredicted RBP13.13□□□□□ -0.31
NID2-201ENST00000216286 CYB5R4Q7L1T6 521 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 HACE1Q8IYU2 909 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 ATP6V0A1Q93050 837 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 SYT17Q9BSW7 474 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 TMX1Q9H3N1 280 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 CETN3O15182 167 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 FCER1AP12319 257 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 NEDD1Q8NHV4 660 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 RBM46Q8TBY0 533 aaKnown RBP13.13□□□□□ -0.31
NID2-201ENST00000216286 ERLIN2O94905 339 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 SIGLEC1Q9BZZ2 1709 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 INO80B-WBP1J3KQ70 363 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 ZBTB5O15062 677 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 TYRO3Q06418 890 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 GPS2Q13227 327 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 WDR44Q5JSH3 913 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 INO80BQ9C086 356 aaPredicted RBP13.13□□□□□ -0.31
NID2-201ENST00000216286 KIAA1024Q9UPX6 916 aa13.13□□□□□ -0.31
NID2-201ENST00000216286 CAVIN2O95810 425 aa13.12□□□□□ -0.31
NID2-201ENST00000216286 CDC25AP30304 524 aa13.12□□□□□ -0.31
NID2-201ENST00000216286 PDXDC2PQ6P474 469 aa13.12□□□□□ -0.31
NID2-201ENST00000216286 NSUN7Q8NE18 718 aaKnown RBP13.12□□□□□ -0.31
NID2-201ENST00000216286 ADPGKQ9BRR6 497 aa13.12□□□□□ -0.31
NID2-201ENST00000216286 GLIS2Q9BZE0 524 aaPredicted RBP13.12□□□□□ -0.31
NID2-201ENST00000216286 FAM49AQ9H0Q0 323 aaPredicted RBP13.12□□□□□ -0.31
NID2-201ENST00000216286 LARSQ9P2J5 1176 aaKnown RBP13.12□□□□□ -0.31
NID2-201ENST00000216286 ZEB2O60315 1214 aa13.12□□□□□ -0.31
NID2-201ENST00000216286 COG2Q14746 738 aa13.12□□□□□ -0.31
NID2-201ENST00000216286 AKT1S1Q96B36 256 aa13.12□□□□□ -0.31
NID2-201ENST00000216286 CLIC6Q96NY7 704 aa13.12□□□□□ -0.31
NID2-201ENST00000216286 TTC12Q9H892 705 aaPredicted RBP13.12□□□□□ -0.31
NID2-201ENST00000216286 GBA2Q9HCG7 927 aaPredicted RBP13.12□□□□□ -0.31
NID2-201ENST00000216286 KCNQ5Q9NR82 932 aa13.12□□□□□ -0.31
NID2-201ENST00000216286 TRMT1Q9NXH9 659 aaKnown RBP13.12□□□□□ -0.31
NID2-201ENST00000216286 CTNND2Q9UQB3 1225 aa13.12□□□□□ -0.31
NID2-201ENST00000216286 LPXNO60711 386 aa13.12□□□□□ -0.31
NID2-201ENST00000216286 CTAGE1Q96RT6 745 aa13.12□□□□□ -0.31
NID2-201ENST00000216286 CYP2B6P20813 491 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 UBXN1Q04323 297 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 RSPH3Q86UC2 560 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 CSGALNACT2Q8N6G5 542 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 KRT5P13647 590 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 TNNI1P19237 187 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 FAM178BQ8IXR5 827 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 ABI1Q8IZP0 508 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 CEP170P1Q96L14 293 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 ANO3Q9BYT9 981 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 GJB4Q9NTQ9 266 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 PCDHB13Q9Y5F0 798 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 KDM3AQ9Y4C1 1321 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 GJC1P36383 396 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 QRICH1Q2TAL8 776 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 NBPF12Q5TAG4 269 aaPredicted RBP13.11□□□□□ -0.31
NID2-201ENST00000216286 FAM200AQ8TCP9 573 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 SPDYE2BA6NHP3 402 aa13.11□□□□□ -0.31
NID2-201ENST00000216286 MEIS1O00470 390 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms