RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 NEDD4P46934 1319 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 CHUKO15111 745 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 FOXN1O15353 648 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 PPP6R2O75170 966 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 CDC27P30260 824 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 IARSP41252 1262 aaKnown RBP11.48□□□□□ -0.57
CHERP-201ENST00000198939 SSR1P43307 286 aaKnown RBP11.48□□□□□ -0.57
CHERP-201ENST00000198939 FMR1Q06787 632 aaKnown RBP eCLIP11.48□□□□□ -0.573e-10■■□□□ 11.6
CHERP-201ENST00000198939 IQCEQ6IPM2 695 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 FBXO33Q7Z6M2 555 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 TBC1D22AQ8WUA7 517 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 N4BP2L2Q92802 583 aaPredicted RBP11.48□□□□□ -0.57
CHERP-201ENST00000198939 SALL1Q9NSC2 1324 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 MYO1FO00160 1098 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 PRC1O43663 620 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 PRPF6O94906 941 aaKnown RBP11.48□□□□□ -0.57
CHERP-201ENST00000198939 NR1I3Q14994 352 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 SND1Q7KZF4 910 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHERP-201ENST00000198939 GSPT2Q8IYD1 628 aaKnown RBP11.48□□□□□ -0.57
CHERP-201ENST00000198939 DBNDD2Q9BQY9 259 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 SAR1BQ9Y6B6 198 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 N4BP3O15049 544 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 POLR2DO15514 142 aaKnown RBP11.48□□□□□ -0.57
CHERP-201ENST00000198939 MATR3P43243 847 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHERP-201ENST00000198939 IMMTQ16891 758 aaKnown RBP11.48□□□□□ -0.57
CHERP-201ENST00000198939 WDR66Q8TBY9 1149 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 DSCC1Q9BVC3 393 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 SELENOOQ9BVL4 669 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 EHD4Q9H223 541 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 CPSF2Q9P2I0 782 aaKnown RBP11.48□□□□□ -0.57
CHERP-201ENST00000198939 ODF2LQ9ULJ1 636 aa11.48□□□□□ -0.57
CHERP-201ENST00000198939 COL11A2P13942 1736 aaPredicted RBP11.48□□□□□ -0.57
CHERP-201ENST00000198939 A0A1B0GUA9 196 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 RIMBP2O15034 1052 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 EIF3HO15372 352 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHERP-201ENST00000198939 KCNV1Q6PIU1 500 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 CYP26C1Q6V0L0 522 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 FOXP4Q8IVH2 680 aaPredicted RBP11.47□□□□□ -0.57
CHERP-201ENST00000198939 KRI1Q8N9T8 703 aaKnown RBP11.47□□□□□ -0.57
CHERP-201ENST00000198939 KBTBD3Q8NAB2 608 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 ZBTB12Q9Y330 459 aaPredicted RBP11.47□□□□□ -0.57
CHERP-201ENST00000198939 PDS5AQ29RF7 1337 aaKnown RBP11.47□□□□□ -0.57
CHERP-201ENST00000198939 GOLGA6L10A6NI86 522 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 MFAP3LO75121 409 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 LMNB1P20700 586 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 SCP2P22307 547 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 SAFBQ15424 915 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHERP-201ENST00000198939 KIAA1328Q86T90 577 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 FAM84BQ96KN1 310 aaPredicted RBP11.47□□□□□ -0.57
CHERP-201ENST00000198939 TACO1Q9BSH4 297 aaKnown RBP11.47□□□□□ -0.57
CHERP-201ENST00000198939 MPHOSPH10O00566 681 aaKnown RBP11.47□□□□□ -0.57
CHERP-201ENST00000198939 CDKL5O76039 1030 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 ELF1P32519 619 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 EIF6P56537 245 aaKnown RBP11.47□□□□□ -0.57
CHERP-201ENST00000198939 TNIP1Q15025 636 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 CCDC181Q5TID7 509 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 RESP18Q5W5W9 173 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 CCDC51Q96ER9 411 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 JADE2Q9NQC1 790 aa11.47□□□□□ -0.57
CHERP-201ENST00000198939 A6NNZ2 444 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 HSPD1P10809 573 aaKnown RBP11.46□□□□□ -0.57
CHERP-201ENST00000198939 ARID4AP29374 1257 aaPredicted RBP11.46□□□□□ -0.57
CHERP-201ENST00000198939 CCT6AP40227 531 aaKnown RBP11.46□□□□□ -0.57
CHERP-201ENST00000198939 ATP2B2Q01814 1243 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 TUBB8Q3ZCM7 444 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 CEP85LQ5SZL2 805 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 FKBP15Q5T1M5 1219 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 CCDC114Q96M63 670 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 CD248Q9HCU0 757 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 CD209Q9NNX6 404 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 HELLSQ9NRZ9 838 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 SERTAD1Q9UHV2 236 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 GOLGA8KD6RF30 607 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 HSF2BPO75031 334 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 SLC9C2Q5TAH2 1124 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 KRT40Q6A162 431 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 SLF2Q8IX21 1173 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 RPGRIP1Q96KN7 1286 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.46□□□□□ -0.576e-7■■■□□ 16.1
CHERP-201ENST00000198939 HPSEQ9Y251 543 aa11.46□□□□□ -0.57
CHERP-201ENST00000198939 IL1R1P14778 569 aa11.46□□□□□ -0.58
CHERP-201ENST00000198939 GCKP35557 465 aa11.46□□□□□ -0.58
CHERP-201ENST00000198939 BCAMP50895 628 aa11.46□□□□□ -0.58
CHERP-201ENST00000198939 KANK3Q6NY19 840 aa11.46□□□□□ -0.58
CHERP-201ENST00000198939 ZNRF3Q9ULT6 936 aa11.46□□□□□ -0.58
CHERP-201ENST00000198939 A0A1B0GTH6 734 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 SRGAP2O75044 1071 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 ZNF18P17022 549 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 GYG1P46976 350 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 BIRC2Q13490 618 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 CCDC122Q5T0U0 273 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 NFXL1Q6ZNB6 911 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 SPATS2Q86XZ4 545 aaKnown RBP11.45□□□□□ -0.58
CHERP-201ENST00000198939 HDAC6Q9UBN7 1215 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 SLX4Q8IY92 1834 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 ECM2O94769 699 aaPredicted RBP11.45□□□□□ -0.58
CHERP-201ENST00000198939 KRT9P35527 623 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 ATP1A2P50993 1020 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 PLCD1P51178 756 aa11.45□□□□□ -0.58
CHERP-201ENST00000198939 PRPF38AQ8NAV1 312 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms