RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 CDKAL1Q5VV42 579 aa11.17□□□□□ -0.62
CLDN18-201ENST00000183605 PUS3Q9BZE2 481 aaKnown RBP11.17□□□□□ -0.62
CLDN18-201ENST00000183605 FOXP1Q9H334 677 aaPredicted RBP11.17□□□□□ -0.62
CLDN18-201ENST00000183605 KCNG1Q9UIX4 513 aa11.17□□□□□ -0.62
CLDN18-201ENST00000183605 RWDD2AQ9UIY3 292 aa11.17□□□□□ -0.62
CLDN18-201ENST00000183605 NCAPD2Q15021 1401 aa11.17□□□□□ -0.62
CLDN18-201ENST00000183605 GMNCA6NCL1 334 aa11.17□□□□□ -0.62
CLDN18-201ENST00000183605 ENO4A6NNW6 628 aa11.17□□□□□ -0.62
CLDN18-201ENST00000183605 UBA7P41226 1012 aa11.17□□□□□ -0.62
CLDN18-201ENST00000183605 CARSP49589 748 aaKnown RBP11.17□□□□□ -0.62
CLDN18-201ENST00000183605 HERVK_113P62684 666 aa11.17□□□□□ -0.62
CLDN18-201ENST00000183605 IRX1P78414 480 aaPredicted RBP11.17□□□□□ -0.62
CLDN18-201ENST00000183605 ZNF790Q6PG37 636 aa11.17□□□□□ -0.62
CLDN18-201ENST00000183605 TBC1D10CQ8IV04 446 aa11.17□□□□□ -0.62
CLDN18-201ENST00000183605 CYFIP2Q96F07 1278 aa11.17□□□□□ -0.62
CLDN18-201ENST00000183605 ATP6V1G3Q96LB4 118 aa11.17□□□□□ -0.62
CLDN18-201ENST00000183605 OSBPL9Q96SU4 736 aa11.17□□□□□ -0.62
CLDN18-201ENST00000183605 LIMA1Q9UHB6 759 aaKnown RBP11.17□□□□□ -0.62
CLDN18-201ENST00000183605 MTMR7Q9Y216 660 aa11.17□□□□□ -0.62
CLDN18-201ENST00000183605 PLAAQ9Y263 795 aa11.17□□□□□ -0.62
CLDN18-201ENST00000183605 PPP1R3GB7ZBB8 358 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 PRDM1O75626 825 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 FAM107AO95990 144 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 NLRP5P59047 1200 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 MAP2K1Q02750 393 aaPredicted RBP11.16□□□□□ -0.62
CLDN18-201ENST00000183605 ARID5AQ03989 594 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 KRT71Q3SY84 523 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 CCDC63Q8NA47 563 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 FERMT2Q96AC1 680 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 NOX5Q96PH1 765 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 SH3GL2Q99962 352 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 NUP58Q9BVL2 599 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 AGPAT5Q9NUQ2 364 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 EXOC1Q9NV70 894 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 GRIN2DO15399 1336 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 JCADQ9P266 1359 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 ROBO2Q9HCK4 1378 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 HMGB1P1B2RPK0 211 aaPredicted RBP11.16□□□□□ -0.62
CLDN18-201ENST00000183605 HGSO14964 777 aaPredicted RBP11.16□□□□□ -0.62
CLDN18-201ENST00000183605 RANBP6O60518 1105 aaKnown RBP11.16□□□□□ -0.62
CLDN18-201ENST00000183605 FMNL1O95466 1100 aaPredicted RBP11.16□□□□□ -0.62
CLDN18-201ENST00000183605 TOB1P50616 345 aaPredicted RBP11.16□□□□□ -0.62
CLDN18-201ENST00000183605 TNNC1P63316 161 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 CUL4BQ13620 913 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 TTC38Q5R3I4 469 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 RUFY4Q6ZNE9 571 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 ZNF579Q8NAF0 562 aaKnown RBP11.16□□□□□ -0.62
CLDN18-201ENST00000183605 DYDC1Q8WWB3 177 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 TUBGCP2Q9BSJ2 902 aa11.16□□□□□ -0.62
CLDN18-201ENST00000183605 A1CFQ9NQ94 594 aaKnown RBP11.16□□□□□ -0.62
CLDN18-201ENST00000183605 FAM237AA0A1B0GTK4 181 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 EIF4E1BA6NMX2 242 aaKnown RBP11.15□□□□□ -0.62
CLDN18-201ENST00000183605 RPN1P04843 607 aaKnown RBP11.15□□□□□ -0.62
CLDN18-201ENST00000183605 SKOR1P84550 965 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 PTGDRQ13258 359 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 TBC1D1Q86TI0 1168 aaPredicted RBP11.15□□□□□ -0.62
CLDN18-201ENST00000183605 IP6K1Q92551 441 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 SLC4A4Q9Y6R1 1079 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 USP31Q70CQ4 1352 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 FAM205CA6NFA0 338 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 VIMP08670 466 aaKnown RBP11.15□□□□□ -0.62
CLDN18-201ENST00000183605 SNRPA1P09661 255 aaKnown RBP11.15□□□□□ -0.62
CLDN18-201ENST00000183605 NT5DC1Q5TFE4 455 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 FAM114A1Q8IWE2 563 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 HVCN1Q96D96 273 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 SAAL1Q96ER3 474 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 DDX20Q9UHI6 824 aaKnown RBP11.15□□□□□ -0.62
CLDN18-201ENST00000183605 TPX2Q9ULW0 747 aaKnown RBP11.15□□□□□ -0.62
CLDN18-201ENST00000183605 REXO2Q9Y3B8 237 aaKnown RBP11.15□□□□□ -0.62
CLDN18-201ENST00000183605 V9GY48 417 aaPredicted RBP11.15□□□□□ -0.62
CLDN18-201ENST00000183605 PALLDQ8WX93 1383 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 GTPBP6O43824 516 aaPredicted RBP11.15□□□□□ -0.62
CLDN18-201ENST00000183605 IFNAR1P17181 557 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 TMOD1P28289 359 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 RFX5P48382 616 aaPredicted RBP11.15□□□□□ -0.62
CLDN18-201ENST00000183605 RBBP5Q15291 538 aaKnown RBP11.15□□□□□ -0.62
CLDN18-201ENST00000183605 PTPROQ16827 1216 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 KDM7AQ6ZMT4 941 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 RRAGAQ7L523 313 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 MMGT1Q8N4V1 131 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 ZNF496Q96IT1 587 aaPredicted RBP11.15□□□□□ -0.62
CLDN18-201ENST00000183605 MS4A14Q96JA4 679 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 YIPF3Q9GZM5 350 aa11.15□□□□□ -0.62
CLDN18-201ENST00000183605 AATFQ9NY61 560 aaKnown RBP eCLIP11.15□□□□□ -0.62
CLDN18-201ENST00000183605 LGALS16A8MUM7 142 aa11.14□□□□□ -0.63
CLDN18-201ENST00000183605 PRCPP42785 496 aa11.14□□□□□ -0.63
CLDN18-201ENST00000183605 RASSF7Q02833 373 aa11.14□□□□□ -0.63
CLDN18-201ENST00000183605 CCDC170Q8IYT3 715 aa11.14□□□□□ -0.63
CLDN18-201ENST00000183605 LRRC45Q96CN5 670 aa11.14□□□□□ -0.63
CLDN18-201ENST00000183605 PYM1Q9BRP8 204 aaKnown RBP11.14□□□□□ -0.63
CLDN18-201ENST00000183605 KRT23Q9C075 422 aa11.14□□□□□ -0.63
CLDN18-201ENST00000183605 KIF9Q9HAQ2 790 aa11.14□□□□□ -0.63
CLDN18-201ENST00000183605 STRN4Q9NRL3 753 aa11.14□□□□□ -0.63
CLDN18-201ENST00000183605 RBM12Q9NTZ6 932 aaKnown RBP11.14□□□□□ -0.63
CLDN18-201ENST00000183605 NOVA2Q9UNW9 492 aaKnown RBP11.14□□□□□ -0.63
CLDN18-201ENST00000183605 MPHOSPH10O00566 681 aaKnown RBP11.14□□□□□ -0.63
CLDN18-201ENST00000183605 PBX1P40424 430 aa11.14□□□□□ -0.63
CLDN18-201ENST00000183605 SSR1P43307 286 aaKnown RBP11.14□□□□□ -0.63
CLDN18-201ENST00000183605 FNTAP49354 379 aa11.14□□□□□ -0.63
CLDN18-201ENST00000183605 ZBED6P86452 979 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms