RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 NARFQ9UHQ1 456 aa13.49□□□□□ -0.25
TSPAN9-201ENST00000011898 USP17L12C9JPN9 530 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 USP17L21D6R901 530 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 TNNI2P48788 182 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 PPARAQ07869 468 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 CDC25BP30305 580 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 ARID5BQ14865 1188 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 GPR162Q16538 588 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 C6orf163Q5TEZ5 329 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 TRMT1LQ7Z2T5 733 aaKnown RBP13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 TMTC1Q8IUR5 882 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 RRP36Q96EU6 259 aaKnown RBP13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 AIFM3Q96NN9 605 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 BLZF1Q9H2G9 400 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 MED4Q9NPJ6 270 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 TMOD2Q9NZR1 351 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 PFDN1O60925 122 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 PICALMQ13492 652 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 USPL1Q5W0Q7 1092 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 SAAL1Q96ER3 474 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 PSDA5PKW4 1024 aaPredicted RBP13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 PPFIA4O75335 1185 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 PLCD1P51178 756 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 CSGALNACT2Q8N6G5 542 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 ISCA1Q9BUE6 129 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 TRIM4Q9C037 500 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 VCXQ9H320 206 aa13.48□□□□□ -0.25
TSPAN9-201ENST00000011898 MACROD2A1Z1Q3 448 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 H7C1W4 665 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 HLA-DOAP06340 250 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 PDE4DQ08499 809 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 IFT88Q13099 833 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 TRIM28Q13263 835 aaKnown RBP13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 PTPN21Q16825 1174 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 CYP26C1Q6V0L0 522 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 CUL5Q93034 780 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 STIM2Q9P246 746 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 TNKSO95271 1327 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 CHUKO15111 745 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 HLFQ16534 295 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 LRRC23Q53EV4 343 aaPredicted RBP13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 EP400NLQ6ZTU2 488 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 RABGGTAQ92696 567 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 ANKRD2Q9GZV1 360 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 PPP2R2CQ9Y2T4 447 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 BTAF1O14981 1849 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 CETN3O15182 167 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 SLF1Q9BQI6 1058 aa13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 NOC4LQ9BVI4 516 aaKnown RBP13.47□□□□□ -0.25
TSPAN9-201ENST00000011898 MAP3K9P80192 1104 aa13.46□□□□□ -0.25
TSPAN9-201ENST00000011898 TSNAXIP1Q2TAA8 658 aa13.46□□□□□ -0.25
TSPAN9-201ENST00000011898 LONRF3Q496Y0 759 aa13.46□□□□□ -0.25
TSPAN9-201ENST00000011898 FAM47AQ5JRC9 791 aa13.46□□□□□ -0.25
TSPAN9-201ENST00000011898 CEP128Q6ZU80 1094 aa13.46□□□□□ -0.25
TSPAN9-201ENST00000011898 LRP10Q7Z4F1 713 aa13.46□□□□□ -0.25
TSPAN9-201ENST00000011898 NLRP10Q86W26 655 aa13.46□□□□□ -0.25
TSPAN9-201ENST00000011898 ARMC2Q8NEN0 867 aa13.46□□□□□ -0.25
TSPAN9-201ENST00000011898 CAMTA2O94983 1202 aa13.46□□□□□ -0.25
TSPAN9-201ENST00000011898 TRIM14Q14142 442 aa13.46□□□□□ -0.25
TSPAN9-201ENST00000011898 IFT74Q96LB3 600 aa13.46□□□□□ -0.25
TSPAN9-201ENST00000011898 HINFPQ9BQA5 517 aa13.46□□□□□ -0.25
TSPAN9-201ENST00000011898 STK38LQ9Y2H1 464 aa13.46□□□□□ -0.25
TSPAN9-201ENST00000011898 RGL2O15211 777 aa13.46□□□□□ -0.26
TSPAN9-201ENST00000011898 CCDC125Q86Z20 511 aa13.46□□□□□ -0.26
TSPAN9-201ENST00000011898 CCDC155Q8N6L0 562 aa13.46□□□□□ -0.26
TSPAN9-201ENST00000011898 YY1AP1Q9H869 796 aa13.46□□□□□ -0.26
TSPAN9-201ENST00000011898 LRRD1A4D1F6 860 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 PPP6R2O75170 966 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 GYG1P46976 350 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 ZNF804AQ7Z570 1209 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 CCDC24Q8N4L8 307 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 PARD6BQ9BYG5 372 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 IKBKBO14920 756 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 RNF40O75150 1001 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 ADD2P35612 726 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 ACTN3Q08043 901 aaPredicted RBP13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 ARHGEF1Q92888 912 aaKnown RBP13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 PPP1R13BQ96KQ4 1090 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 EN1Q05925 392 aaPredicted RBP13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 MED23Q9ULK4 1368 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 ATP1A3P13637 1013 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 ST5P78524 1137 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 TFAP4Q01664 338 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 GOLGA8FQ08AF8 430 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 GOLGA8DPQ0D2H9 430 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 RASIP1Q5U651 963 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 TRIML1Q8N9V2 468 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 PRPF38AQ8NAV1 312 aaKnown RBP13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 YIPF3Q9GZM5 350 aa13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 SAP30BPQ9UHR5 308 aaKnown RBP13.45□□□□□ -0.26
TSPAN9-201ENST00000011898 RPAP1Q9BWH6 1393 aaPredicted RBP13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 PARP1P09874 1014 aaKnown RBP13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 SV2BQ7L1I2 683 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 NELFBQ8WX92 580 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 ZSWIM5Q9P217 1185 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 CCDC151A5D8V7 595 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 TBCAO75347 108 aaKnown RBP13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 PSMD2Q13200 908 aa13.44□□□□□ -0.26
TSPAN9-201ENST00000011898 TCP11Q8WWU5 503 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms