RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Ttc26Q8BS45 554 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Q8C5C9 218 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Gramd4Q8CB44 633 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 SmtnQ921U8 923 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 LrmdaQ9D9B4 229 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Myh13B1AR69 1938 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Gm28360A0A087WR25 190 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Apba1B2RUJ5 842 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Phldb3E9QAF4 648 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 ByslO54825 436 aaKnown RBP11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 RaraP11416 462 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Hsd17b1P51656 344 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Mks1Q5SW45 561 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Bank1Q80VH0 783 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Tpcn2Q8BWC0 731 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Pak2Q8CIN4 524 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Plcb4Q91UZ1 1175 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Trim11Q99PQ2 467 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Ndst4Q9EQW8 872 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Shank2Q80Z38 1476 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Col18a1P39061 1774 aa11.28□□□□□ -0.6
Ctc1-202ENSMUST00000116359 ChkbO55229 394 aa11.27□□□□□ -0.6
Ctc1-202ENSMUST00000116359 MybP06876 636 aa11.27□□□□□ -0.6
Ctc1-202ENSMUST00000116359 SrprbP47758 269 aa11.27□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Man2a2Q8BRK9 1152 aa11.27□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Slc12a6Q924N4 1150 aa11.27□□□□□ -0.6
Ctc1-202ENSMUST00000116359 NenfQ9CQ45 171 aa11.27□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Haus2Q9CQS9 234 aa11.27□□□□□ -0.6
Ctc1-202ENSMUST00000116359 4933428M09RikQ9D3X3 192 aa11.27□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Sil1Q9EPK6 465 aa11.27□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Ankrd2Q9WV06 328 aa11.27□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Slit2Q9R1B9 1521 aa11.27□□□□□ -0.6
Ctc1-202ENSMUST00000116359 Gm21680A0A0G2JGR8 267 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 4932429P05RikA2ADI4 785 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Bcl2l13P59017 434 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Llgl2Q3TJ91 1027 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Trim37Q6PCX9 961 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Olfr119Q7TRJ5 321 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Slc51bQ80WK2 128 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Arfgap2Q99K28 520 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Rmi1Q9D4G9 616 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Atp6v1g2Q9WTT4 118 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Znf394Q9Z1D9 521 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Chd4Q6PDQ2 1915 aaKnown RBP11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Wdr19Q3UGF1 1341 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Fam47eD3YWC7 402 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Ccdc170D3YXL0 722 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Smarca1Q6PGB8 1046 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 NostrinQ6WKZ7 506 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Ppm1fQ8CGA0 452 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Pkn3Q8K045 878 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Dnajc17Q91WT4 303 aa11.27□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Tada2bD3Z4Z0 420 aaKnown RBP11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Chmp6P0C0A3 200 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Ighmbp2P40694 993 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Oxr1Q4KMM3 866 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Exoc3Q6KAR6 755 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Ubxn1Q922Y1 297 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Atp6v1e2Q9D593 226 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Capn9Q9D805 690 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Jph2Q9ET78 696 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Plekhd1B2RPU2 505 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Wdr72D3YYM4 1114 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Epb41l2O70318 988 aaKnown RBP11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Zfp42P22227 288 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Traf5P70191 558 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Eya1P97767 591 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Ift20Q61025 132 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Arl13bQ640N2 427 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Cep55Q8BT07 462 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Rpa1Q8VEE4 623 aaKnown RBP11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Myo1hQ9D6A1 958 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Pik3c2aQ61194 1686 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Serpina1bP22599 413 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Ptprn2P80560 1001 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Golim4Q8BXA1 655 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Taok3Q8BYC6 898 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 GlmnQ8BZM1 596 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 MefvQ9JJ26 767 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Pkd2l2Q9JLG4 621 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 C5P06684 1680 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Gm28919A0A087WP35 240 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Lrriq4A6H6A4 596 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 LtbrP50284 415 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Tex35Q14BK3 207 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Lsm14bQ8CGC4 385 aaKnown RBP11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Spata2Q8K004 515 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 PccaQ91ZA3 724 aa11.26□□□□□ -0.61
Ctc1-202ENSMUST00000116359 C3P01027 1663 aa11.25□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Atp2a2O55143 1044 aaKnown RBP11.25□□□□□ -0.61
Ctc1-202ENSMUST00000116359 CatspereP0DP43 985 aa11.25□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Kif5aP33175 1027 aa11.25□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Cxcr2P35343 359 aa11.25□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Krt74Q6IFZ9 495 aa11.25□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Mpp4Q6P7F1 635 aa11.25□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Prl7b1Q8CGZ9 251 aa11.25□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Rbm17Q8JZX4 405 aaKnown RBP11.25□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Thsd7aQ69ZU6 1645 aa11.25□□□□□ -0.61
Ctc1-202ENSMUST00000116359 Parp14Q2EMV9 1817 aa11.25□□□□□ -0.61
Ctc1-202ENSMUST00000116359 CcnjlQ5SRT8 387 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms