RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Dact1Q8R4A3 778 aa20.57■□□□□ 0.88
Trim47-202ENSMUST00000106441 Bap1Q99PU7 728 aa20.57■□□□□ 0.88
Trim47-202ENSMUST00000106441 Ccdc96Q9CR92 584 aa20.57■□□□□ 0.88
Trim47-202ENSMUST00000106441 Uchl5Q9WUP7 329 aa20.57■□□□□ 0.88
Trim47-202ENSMUST00000106441 Gcom1E9PZ54 550 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Il7P10168 154 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Znhit6Q3UFB2 460 aaKnown RBP20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 MyzapQ3UIJ9 466 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Pramel6Q810Y9 485 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Ndfip2Q91ZP6 311 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Tube1Q9D6T1 475 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Cwc15Q9JHS9 229 aaKnown RBP20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Lamb1P02469 1786 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Lbhd1A0A087WPA0 259 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Traf1P39428 409 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Traf3ip1Q149C2 625 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Tigd5Q499M4 642 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 DaglaQ6WQJ1 1044 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Necab1Q8BG18 352 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Cdc23Q8BGZ4 597 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Bicdl2Q8CHW5 507 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Trim29Q8R2Q0 587 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Tab2Q99K90 693 aa20.56■□□□□ 0.88
Trim47-202ENSMUST00000106441 Gm21969J3QJZ1 289 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 Tmtc2Q56A06 836 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 Mkrn3Q60764 544 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 Ppil2Q9D787 521 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 Dpp7Q9ET22 506 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 DonsonQ9QXP4 560 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 Gm43738A0A0G2JEA5 862 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 NpcdF8VQB8 469 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 Abl1P00520 1123 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 LtbrP50284 415 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 Spata5Q3UMC0 893 aaKnown RBP20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 Olfr121Q5CZY0 321 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 GnptabQ69ZN6 1235 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 Pus7lQ8CE46 702 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 Cypt1Q8CH20 168 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 Ubac1Q8VDI7 409 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 Zbed3Q9D0L1 228 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 Tmem79Q9D709 391 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 Tgm5Q9D7I9 724 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 Sept14Q9DA97 430 aa20.55■□□□□ 0.88
Trim47-202ENSMUST00000106441 Arhgap4B1AUY3 965 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 UncxO08934 530 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 Api5O35841 504 aaKnown RBP20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 Wnt10bP48614 389 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 Cdr2P97817 455 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 Trappc10Q3TLI0 1259 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 Gxylt1Q3UHH8 404 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 C87499Q3UX49 493 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 Sun3Q5SS91 320 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 Ctnna3Q65CL1 895 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 Hdac4Q6NZM9 1076 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 Caps2Q8BUG5 550 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 Hgh1Q8C3I8 393 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 Taf6lQ8R2K4 616 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 Ascc2Q91WR3 749 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 Thap2Q9D305 217 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 Efcc1Q9JJF6 558 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 Uso1Q9Z1Z0 959 aaKnown RBP20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 Bcorl1A2AQH4 1781 aa20.54■□□□□ 0.88
Trim47-202ENSMUST00000106441 TbcaP48428 108 aaKnown RBP20.53■□□□□ 0.88
Trim47-202ENSMUST00000106441 Gucy2cQ3UWA6 1072 aa20.53■□□□□ 0.88
Trim47-202ENSMUST00000106441 FntaQ61239 377 aa20.53■□□□□ 0.88
Trim47-202ENSMUST00000106441 Ttll4Q80UG8 1193 aa20.53■□□□□ 0.88
Trim47-202ENSMUST00000106441 Trappc12Q8K2L8 797 aa20.53■□□□□ 0.88
Trim47-202ENSMUST00000106441 Yipf1Q91VU1 306 aa20.53■□□□□ 0.88
Trim47-202ENSMUST00000106441 Lonp2Q9DBN5 852 aa20.53■□□□□ 0.88
Trim47-202ENSMUST00000106441 Prr16A3KMN5 304 aa20.53■□□□□ 0.88
Trim47-202ENSMUST00000106441 CnpP16330 420 aa20.53■□□□□ 0.88
Trim47-202ENSMUST00000106441 Prpf38aQ4FK66 312 aaKnown RBP20.53■□□□□ 0.88
Trim47-202ENSMUST00000106441 Cnot7Q60809 285 aa20.53■□□□□ 0.88
Trim47-202ENSMUST00000106441 Otop3Q80UF9 577 aa20.53■□□□□ 0.88
Trim47-202ENSMUST00000106441 Abhd2Q9QXM0 425 aa20.53■□□□□ 0.88
Trim47-202ENSMUST00000106441 Ulk4Q3V129 1303 aa20.53■□□□□ 0.88
Trim47-202ENSMUST00000106441 Eef2P58252 858 aaKnown RBP20.52■□□□□ 0.88
Trim47-202ENSMUST00000106441 Tacc1Q6Y685 774 aa20.52■□□□□ 0.88
Trim47-202ENSMUST00000106441 QarsQ8BML9 775 aa20.52■□□□□ 0.88
Trim47-202ENSMUST00000106441 Apol10aQ8CCA5 318 aa20.52■□□□□ 0.88
Trim47-202ENSMUST00000106441 Shtn1Q8K2Q9 631 aa20.52■□□□□ 0.88
Trim47-202ENSMUST00000106441 Igsf9bE9PZ19 1328 aa20.52■□□□□ 0.88
Trim47-202ENSMUST00000106441 Plekhg2Q6KAU7 1340 aa20.52■□□□□ 0.88
Trim47-202ENSMUST00000106441 Plxnb2B2RXS4 1842 aa20.52■□□□□ 0.88
Trim47-202ENSMUST00000106441 MarcksP26645 309 aaKnown RBP20.52■□□□□ 0.88
Trim47-202ENSMUST00000106441 Atp8b1Q148W0 1251 aa20.52■□□□□ 0.88
Trim47-202ENSMUST00000106441 Scaf8Q6DID3 1268 aa20.52■□□□□ 0.88
Trim47-202ENSMUST00000106441 Trmt2aQ8BNV1 574 aaKnown RBP20.52■□□□□ 0.88
Trim47-202ENSMUST00000106441 Rasal3Q8C2K5 1041 aa20.52■□□□□ 0.88
Trim47-202ENSMUST00000106441 E2f4Q8R0K9 410 aa20.52■□□□□ 0.88
Trim47-202ENSMUST00000106441 Lman1lQ8VCD3 505 aa20.52■□□□□ 0.88
Trim47-202ENSMUST00000106441 HibadhQ99L13 335 aaKnown RBP20.52■□□□□ 0.88
Trim47-202ENSMUST00000106441 Ccdc114Q3UX62 658 aa20.51■□□□□ 0.87
Trim47-202ENSMUST00000106441 Slc27a3O88561 667 aa20.51■□□□□ 0.87
Trim47-202ENSMUST00000106441 GpiP06745 558 aaKnown RBP20.51■□□□□ 0.87
Trim47-202ENSMUST00000106441 Fam178bQ24JP3 464 aa20.51■□□□□ 0.87
Trim47-202ENSMUST00000106441 Klhdc9Q3USL1 350 aa20.51■□□□□ 0.87
Trim47-202ENSMUST00000106441 Drc7Q6V3W6 876 aa20.51■□□□□ 0.87
Trim47-202ENSMUST00000106441 Pcdha12Q91Y18 950 aa20.51■□□□□ 0.87
Trim47-202ENSMUST00000106441 Borcs6Q9D6W8 360 aa20.51■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms