RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Fam83gQ5SWY7 812 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ppp2r2aQ6P1F6 447 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ccdc50Q810U5 305 aaKnown RBP10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Mfn1Q811U4 741 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 E330017A01RikQ8BU47 192 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Shtn1Q8K2Q9 631 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 StrbpQ91WM1 672 aaKnown RBP10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Senp2Q91ZX6 588 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Cuedc2Q9CXX9 284 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Gucy1a3Q9ERL9 691 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 ThegQ9JMB1 375 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 CenphQ9QYM8 241 aa10.75□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Trappc11B2RXC1 1133 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Gm44G3UW88 330 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Dapk3O54784 448 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Epb41l2O70318 988 aaKnown RBP10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 RxrbP28704 520 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Mex3cQ05A36 652 aaKnown RBP10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ckap2Q3V1H1 664 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Tmcc1Q69ZZ6 649 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Acap3Q6NXL5 833 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Rnf220Q6PDX6 566 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 AidaQ8C4Q6 305 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 SltmQ8CH25 1031 aaKnown RBP10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Fermt3Q8K1B8 665 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ccdc14Q8K2J4 934 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Znf131Q8K3J5 619 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Bzw2Q91VK1 419 aaKnown RBP10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 PlgrktQ9D3P8 147 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Atp6v1e2Q9D593 226 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 MefvQ9JJ26 767 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 PhaxQ9JJT9 385 aaKnown RBP10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Fmnl1Q9JL26 1094 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Itga2bQ9QUM0 1033 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Rnf4Q9QZS2 194 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Plcb1Q9Z1B3 1216 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Abcc4E9Q236 1325 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Topbp1Q6ZQF0 1515 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Dync1i2O88487 612 aaKnown RBP10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Mdm2P23804 489 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Pafah1b1P63005 410 aaKnown RBP10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Epha2Q03145 977 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Sox13Q04891 613 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Mcm10Q0VBD2 885 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 HnrnpdQ60668 355 aaKnown RBP10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Zbtb17Q60821 794 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Soat1Q61263 540 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Prl7b1Q8CGZ9 251 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Agap3Q8VHH5 910 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 NcaldQ91X97 193 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Pcdha3Q91Y16 942 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Stk24Q99KH8 431 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 NwcQ9CQI4 244 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ccdc70Q9D9B0 223 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Smco2Q9DA21 347 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Scgb2b20Q9JI02 112 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Prex1Q69ZK0 1650 aa10.74□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Kif23E9Q5G3 953 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Krt8P11679 490 aaKnown RBP10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Clk1P22518 483 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Hspa9P38647 679 aaKnown RBP10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Drp2Q05AA6 957 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Arhgef16Q3U5C8 713 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Arhgap17Q3UIA2 846 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Dzip1lQ499E4 774 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Kctd16Q5DTY9 427 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Adck2Q6NSR3 617 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Slc51bQ80WK2 128 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Jph4Q80WT0 628 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Zfp438Q8BFX2 798 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Tarsl2Q8BLY2 790 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Scfd2Q8BTY8 684 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Agap1Q8BXK8 857 aaKnown RBP10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 SdsQ8VBT2 327 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Slc35f6Q8VE96 372 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Fam192aQ91WE2 254 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Nacc2Q9DCM7 586 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Igsf1Q7TQA1 1317 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Tmem2Q5FWI3 1383 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 C5P06684 1680 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Mrc2Q64449 1479 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Gm9774A0A0A6YVU8 407 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Krt90E9Q1Z0 538 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Hap1O35668 628 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ptpn20O55082 426 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Xirp1O70373 1129 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Yy1Q00899 414 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ccdc125Q5U465 500 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Prpf4bQ61136 1007 aaKnown RBP10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Fsd1Q7TPM6 496 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Spata4Q8K3V1 295 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Pspc1Q8R326 523 aaKnown RBP10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Tubgcp4Q9D4F8 667 aa10.73□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Znf518aB2RRF6 1478 aaKnown RBP10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Gm382B1AXN3 1250 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Sec24cG3X972 1096 aaKnown RBP10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 InhbcP55104 352 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Dab2ipQ3UHC7 1189 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Syce2Q505B8 171 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ppp1r14bQ62084 147 aa10.72□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms