RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Gys2Q8VCB3 704 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Vps36Q91XD6 386 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Rbm33Q9CXK9 1231 aaKnown RBP9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Magi2Q9WVQ1 1275 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Vstm4T1NXB5 319 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ltbp4Q8K4G1 1666 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Armc3A2AU72 881 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Cetn3O35648 167 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Mcm5P49718 733 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Usp50Q6P8X6 390 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Klhl20Q8VCK5 604 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Cd2apQ9JLQ0 637 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Gm28919A0A087WP35 240 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Armcx3Q8BHS6 379 aa9.44□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Map7d1A2AJI0 846 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Sema3eP70275 775 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Gm5169Q5M8P2 212 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ovgp1Q62010 721 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Rbm41Q8JZV4 413 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 MlphQ91V27 590 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Q9D5Q8 446 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Psma7Q9Z2U0 248 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Brwd3A2AHJ4 1799 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Herc3A6H6S0 1050 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Eef2P58252 858 aaKnown RBP9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Mars2Q499X9 586 aaKnown RBP9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Asic3Q6X1Y6 530 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Pnpla2Q8BJ56 486 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Usp37Q8C0R0 979 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Cabp5Q9JLK3 173 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Col3a1P08121 1464 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Lcmt1A0A0U1RNF2 332 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Apol7aB2RT54 418 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Mroh8E9PYI4 1049 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Rnf216P58283 853 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Kcnd1Q03719 651 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Tcerg1lQ3B807 590 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Nyap1Q6PFX7 833 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Traf3ip3Q8C0G2 513 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Nek9Q8K1R7 984 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Gtpbp4Q99ME9 634 aaKnown RBP9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Stag2O35638 1231 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Akap2O54931 893 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Tagap1P0CAX8 505 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Cdc25aP48964 514 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Kifap3P70188 793 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Arglu1Q3UL36 271 aaKnown RBP9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Fgfr1opQ66JX5 399 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ccdc14Q8K2J4 934 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Akt1s1Q9D1F4 257 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Desi2Q9D291 194 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Abhd2Q9QXM0 425 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Cnbd1B1AWM0 430 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Arhgef2Q60875 985 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ccpg1Q640L3 753 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 CtifQ6PEE2 600 aaKnown RBP9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Map3k11Q80XI6 850 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Spata4Q8K3V1 295 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Apopt1Q9CQW7 192 aa9.43□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Krt15Q61414 452 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Adgrg6Q6F3F9 1165 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Herc4Q6PAV2 1057 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Erlin2Q8BFZ9 340 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Bicdl2Q8CHW5 507 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Pcdh11xF6ZNL5 1338 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Spocd1B1ASB6 936 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Card6E9PWH2 1175 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 AcrbpQ3V140 540 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Tsr1Q5SWD9 803 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Large2Q5XPT3 690 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ces3aQ63880 571 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Swap70Q6A028 585 aaKnown RBP9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Fbxo11Q7TPD1 930 aaKnown RBP9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ces3bQ8VCU1 571 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Abca3Q8R420 1704 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Pnpla6Q3TRM4 1355 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Eme2Q56A04 373 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 TfrcQ62351 763 aaKnown RBP9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Etnk1Q9D4V0 363 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Fam217aQ9D9W6 419 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Slc26a4Q9R155 780 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 FocadA2AKG8 1798 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Psmb7P70195 277 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 NfixP70257 488 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Fnbp4Q6ZQ03 1031 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Rnf34Q99KR6 376 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Sgpp1Q9JI99 430 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Itga2bQ9QUM0 1033 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Igsf9bE9PZ19 1328 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Tdo2P48776 406 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ccdc157Q5SPX1 718 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Kiaa0319Q5SZV5 1081 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Ccna1Q61456 421 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Cdc23Q8BGZ4 597 aa9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Scfd1Q8BRF7 639 aaKnown RBP9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Mrpl11Q9CQF0 192 aaKnown RBP9.42□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Gm5580A0A0N4SVP8 411 aa9.41□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Slc39a2G3X943 309 aa9.41□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Surf1P09925 306 aa9.41□□□□□ -0.9
Sf3b1-201ENSMUST00000027127 Bend4P86174 541 aa9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms