RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Emilin1Q99K41 1017 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Ifi35Q9D8C4 286 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Q9DAQ4 598 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Suclg2Q9Z2I8 433 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Stim2P83093 746 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Ripply1Q2WG77 201 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Cyp26b1Q811W2 512 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Tor4aQ8BH02 426 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Cacna2d3Q9Z1L5 1091 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Znf608Q56A10 1511 aa13.51□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Rfc1P35601 1131 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 D130040H23RikQ8BII3 405 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Naa25Q8BWZ3 972 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Dnm3Q8BZ98 863 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Ccdc87Q8CDL9 855 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Cap2Q9CYT6 476 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Cep83Q9D5R3 692 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Pex11aQ9Z211 246 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Cpb1B2RS76 415 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Calb1P12658 261 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Evi5P97366 809 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Cnpy3Q9DAU1 276 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Trmt112Q9DCG9 125 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 RabggtaQ9JHK4 567 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 PtpruB1AUH1 1446 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 GabrdP22933 449 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Xrcc5P27641 732 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 PhbP67778 272 aaKnown RBP13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Znf652Q5DU09 608 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Cnot10Q8BH15 744 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 CnstQ8CBC4 711 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Mrpl50Q8VDT9 159 aaKnown RBP13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Pstpip2Q99M15 334 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Mtmr7Q9Z2C9 660 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 CemipQ8BI06 1361 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Idh1O88844 414 aaKnown RBP13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 DnttP09838 530 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 EnahQ03173 802 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Gm10488Q4KL05 212 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Dzip3Q7TPV2 1204 aa13.5□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Hdac4Q6NZM9 1076 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Zbtb1Q91VL9 713 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Ivns1abpQ920Q8 642 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Psrc1Q9D0P7 329 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Rcan1Q9JHG6 198 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Gdf11Q9Z1W4 405 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Msh6P54276 1358 aaKnown RBP13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Ccdc169Q8BXX9 214 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 TbcbQ9D1E6 244 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Mei1Q9D4I2 1268 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Tmod4Q9JLH8 345 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Simc1E9Q6E9 1354 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Ulk4Q3V129 1303 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 4932429P05RikA2ADI4 785 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Mroh7A2AVR2 1279 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Atp2a3Q64518 1038 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Arhgap10Q6Y5D8 786 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Nme8Q715T0 586 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Znf526Q8BI66 675 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Psmd2Q8VDM4 908 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 AacsQ9D2R0 672 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Depdc5P61460 1591 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Neurl4Q5NCX5 1563 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 A0A1Y7VML8 143 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Pald1P70261 859 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Ccdc92bQ5SUE3 299 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Nacc1Q7TSZ8 514 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Epn1Q80VP1 575 aa13.49□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Prr5lA2AVJ5 370 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Birc2Q62210 612 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 WaplQ65Z40 1200 aaKnown RBP13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Zfp317Q8C0Q5 607 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Kcnk16G5E845 292 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Nedd9O35177 833 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Pgrmc1O55022 195 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Lrriq3Q14DL3 633 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Fam228bQ497Q6 232 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Krt12Q64291 487 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Rapgef5Q8C0Q9 814 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 PdiltQ9DAN1 588 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Gkap1Q9JMB0 366 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Q6PD19 689 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 LgsnQ8CIX8 563 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 CactinQ9CS00 772 aaKnown RBP13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Gm9992B2RWK3 458 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Pcif1P59114 706 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Q3TYL0 343 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Cracr2aQ3UP38 310 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Ppp1r13bQ62415 1087 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Unc93aQ710D3 458 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Ttll1Q91V51 423 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Drc3Q9D5E4 523 aa13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Riok3Q9DBU3 519 aaKnown RBP13.48□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Sept1P42209 366 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Clca2Q8BG22 942 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Rwdd2aQ9D9S3 292 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Tcof1O08784 1320 aaKnown RBP13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 CopeO89079 308 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Arl1P61211 181 aa13.47□□□□□ -0.25
Ldb3-201ENSMUST00000022327 Sorbs1Q62417 1290 aa13.47□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms