RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Etnk1Q9D4V0 363 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Plcb1Q9Z1B3 1216 aa14.12□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Epha2Q03145 977 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Kiaa1468Q148V7 1216 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Usp50Q6P8X6 390 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Trim52Q8CDV4 233 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Sde2Q8K1J5 448 aaKnown RBP14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Enox2Q8R0Z2 598 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Eif4a3Q91VC3 411 aaKnown RBP14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Pcdhgc5Q91XW9 944 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Gpaa1Q9WTK3 621 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ppp1r9aH3BJD6 1292 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Sox13Q04891 613 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Armc2Q3URY6 854 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Clca2Q8BG22 942 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Zbtb1Q91VL9 713 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Fam133bQ9CVI2 245 aaKnown RBP14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Sept12Q9D451 317 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Unc13bQ9Z1N9 1602 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Bpifb4A2BGH0 617 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Clcn6O35454 870 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ncf2O70145 525 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Plcb3P51432 1234 aaKnown RBP14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Hps5P59438 1126 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Tsr1Q5SWD9 803 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Cep70Q6IQY5 616 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ift74Q8BKE9 600 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Rint1Q8BZ36 792 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Pus7lQ8CE46 702 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Washc1Q8VDD8 475 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Atp6v0a4Q920R6 833 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ciao1Q99KN2 339 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Cep19Q9CQA8 163 aa14.11□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Siglec1Q62230 1695 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Krt78E9Q0F0 1068 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Parp1P11103 1013 aaKnown RBP14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Pde6bP23440 856 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Tshz2Q68FE9 1030 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Pabpc4Q6PHQ9 660 aaKnown RBP14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Hook2Q7TMK6 716 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Rexo1Q7TT28 1213 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ankrd24Q80VM7 985 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Armcx3Q8BHS6 379 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Kiaa1024Q8K3V7 917 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Slc39a2G3X943 309 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Kctd19Q562E2 927 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 HelbQ6NVF4 1074 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Hirip3Q8BLH7 601 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Spice1Q8C804 860 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Fam161bQ8CB59 589 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Tns2Q8CGB6 1400 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Gm4340L7N2C4 268 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Meis3P97368 378 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 MaeaQ4VC33 396 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Prl2c1Q5SVL9 228 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Map10Q8BJS7 891 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Tmx4Q8C0L0 335 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 IqcdQ9D3V1 458 aa14.1□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Sik3Q6P4S6 1311 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Cct6bQ61390 531 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Fkbp3Q62446 224 aaKnown RBP14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Dcaf5Q80T85 946 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Fam228aQ8CDW1 299 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ints5Q8CHT3 1018 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 RabggtaQ9JHK4 567 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Myo3bQ1EG27 1305 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Tpp1O89023 562 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Tcp1P11983 556 aaKnown RBP14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ercc5P35689 1170 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Gjb4Q02738 266 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Olfr118Q7TRJ6 321 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 QarsQ8BML9 775 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ttc26Q8BS45 554 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Hook3Q8BUK6 718 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 SnrkQ8VDU5 748 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Creb3l3Q91XE9 479 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Apol6B7ZC55 329 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Kif5cP28738 956 aaKnown RBP14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 RubcnlQ3TD16 648 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Tbc1d30Q69ZT9 766 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Micall1Q8BGT6 870 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Hsf2bpQ9D4G2 338 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Gucy1a3Q9ERL9 691 aa14.09□□□□□ -0.15
Clcn3-201ENSMUST00000004430 1700018F24RikB2RW27 314 aa14.08□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Copb2O55029 905 aa14.08□□□□□ -0.15
Clcn3-201ENSMUST00000004430 LtbrP50284 415 aa14.08□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Ica1lQ3TY65 431 aa14.08□□□□□ -0.15
Clcn3-201ENSMUST00000004430 ErmnQ5EBJ4 281 aa14.08□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Nek5Q7TSC3 627 aa14.08□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Spata16Q8C636 571 aa14.08□□□□□ -0.15
Clcn3-201ENSMUST00000004430 Stox1B2RQL2 990 aa14.08□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Zfp408H7BX78 710 aa14.08□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Hspa1lP16627 641 aa14.08□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Slc7a1Q09143 622 aa14.08□□□□□ -0.16
Clcn3-201ENSMUST00000004430 VrtnQ3SYK4 740 aa14.08□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Kif22Q3V300 660 aa14.08□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Stk38lQ7TSE6 464 aa14.08□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Sh2b1Q91ZM2 756 aa14.08□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Ces1aE9PYP1 563 aa14.08□□□□□ -0.16
Clcn3-201ENSMUST00000004430 Cyp3a25O09158 503 aa14.08□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 59.5 ms