RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Ppp1r7Q3UM45 361 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ccdc157Q5SPX1 718 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 LrmpQ60664 539 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Glg1Q61543 1175 aaKnown RBP10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Haus6Q6NV99 933 aaKnown RBP10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Dnph1Q80VJ3 173 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Spata32Q8C5V0 334 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ccdc186Q8C9S4 917 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Tmem63cQ8CBX0 802 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Taf6lQ8R2K4 616 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Pcdhb5Q91XZ5 792 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Slc5a4bQ91ZP4 660 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Apobec3Q99J72 440 aaKnown RBP10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 AdarQ99MU3 1178 aaKnown RBP10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Sept14Q9DA97 430 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ubxn8Q9QZ49 277 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ppp2r3dQ9Z176 491 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ankrd13dQ6PD24 605 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Pabpc4Q6PHQ9 660 aaKnown RBP10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ccdc25Q78PG9 208 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ttc26Q8BS45 554 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 HmcesQ8R1M0 353 aaKnown RBP10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Klhl20Q8VCK5 604 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Snrnp35Q9D384 244 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Sall1Q9ER74 1322 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Arfgef2A2A5R2 1792 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Frmd7A2AD83 703 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Pfkfb3A7UAK5 555 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Krt15Q61414 452 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Gpt2Q8BGT5 522 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 GlyctkQ8QZY2 523 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Xrcc4Q924T3 326 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Six6os1Q9CTN5 574 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 AdnpQ9Z103 1108 aaKnown RBP10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Tex13c2A0A0G2JGA3 530 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Sec24cG3X972 1096 aaKnown RBP10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Tom1O88746 492 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 NeblQ0II04 452 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Mum1l1Q4VA55 681 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Tmem232Q5K6N0 675 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Map3k12Q60700 888 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 PicalmQ7M6Y3 660 aaKnown RBP10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Hirip3Q8BLH7 601 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Q8C5C9 218 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Lmbrd1Q8K0B2 537 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Calml4Q91WQ9 153 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Glrx3Q9CQM9 337 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ndufab1Q9CR21 156 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Saal1Q9D2C2 474 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Map2P20357 1828 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 C3P01027 1663 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ankrd63A2ARS0 390 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Zfand4D3Z3C6 739 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Kif23E9Q5G3 953 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Lrrc32G3XA59 663 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Akap2O54931 893 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Fdx1P46656 188 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Sec31aQ3UPL0 1230 aaKnown RBP10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Mkrn3Q60764 544 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Il17raQ60943 864 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Rhpn1Q61085 643 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ankrd13aQ80UP5 588 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Cep95Q8BVV7 827 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Shisa4Q8CA71 197 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 McamQ8R2Y2 648 aaKnown RBP10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Eif4a3Q91VC3 411 aaKnown RBP10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Q91WD4 421 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 AacsQ9D2R0 672 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Trmt112Q9DCG9 125 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Igsf9bE9PZ19 1328 aa10.5□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Cul9Q80TT8 1865 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Capn2O08529 700 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Art2aP17981 287 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Slc12a2P55012 1205 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Jade3Q6IE82 823 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Sdccag8Q80UF4 717 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Camsap3Q80VC9 1252 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Yars2Q8BYL4 472 aaKnown RBP10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Enox2Q8R0Z2 598 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Synpo2Q91YE8 1087 aaKnown RBP10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 1700020D05RikQ99PB1 294 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Itga2bQ9QUM0 1033 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Apol6B7ZC55 329 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Hps5P59438 1126 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Meis3P97368 378 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Dok7Q18PE0 504 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Olfr121Q5CZY0 321 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Irak1Q62406 710 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Sh3d21Q7TSG5 549 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ifih1Q8R5F7 1025 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Eif4enif1Q9EST3 983 aaKnown RBP10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Zscan18E9PUD6 809 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Alppl2P24823 529 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Brinp3Q499E0 766 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Tsr1Q5SWD9 803 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Cct6bQ61390 531 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Cep70Q6IQY5 616 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 KhnynQ80U38 671 aa10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 HdlbpQ8VDJ3 1268 aaKnown RBP10.49□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Gtf2iQ9ESZ8 998 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms