RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C GAT1P43574 510 aa7.15□□□□□ -1.26
UME1YPL139C RTA1P53047 317 aa7.15□□□□□ -1.26
UME1YPL139C NOP15P53927 220 aaPredicted RBP7.15□□□□□ -1.26
UME1YPL139C RNY1Q02933 434 aaKnown RBP7.15□□□□□ -1.26
UME1YPL139C RRB1Q04225 511 aaKnown RBP7.15□□□□□ -1.26
UME1YPL139C TRM12Q04235 462 aa7.15□□□□□ -1.26
UME1YPL139C ADE13Q05911 482 aaKnown RBP7.15□□□□□ -1.26
UME1YPL139C YLR456WQ06199 204 aa7.15□□□□□ -1.26
UME1YPL139C STE2D6VTK4 431 aa7.14□□□□□ -1.27
UME1YPL139C CPA1P07258 411 aaKnown RBP7.14□□□□□ -1.27
UME1YPL139C RED1P14291 827 aa7.14□□□□□ -1.27
UME1YPL139C DPB3P27344 201 aa7.14□□□□□ -1.27
UME1YPL139C LEU5P38702 357 aa7.14□□□□□ -1.27
UME1YPL139C DED81P38707 554 aaKnown RBP7.14□□□□□ -1.27
UME1YPL139C UBA4P38820 440 aa7.14□□□□□ -1.27
UME1YPL139C LSM5P40089 93 aaKnown RBP7.14□□□□□ -1.27
UME1YPL139C BIR1P47134 954 aa7.14□□□□□ -1.27
UME1YPL139C PEX8P53248 589 aa7.14□□□□□ -1.27
UME1YPL139C CPR6P53691 371 aaKnown RBP7.14□□□□□ -1.27
UME1YPL139C CTK1Q03957 528 aaKnown RBP7.14□□□□□ -1.27
UME1YPL139C NUT2Q06213 157 aa7.14□□□□□ -1.27
UME1YPL139C TGL5Q12043 749 aa7.14□□□□□ -1.27
UME1YPL139C MRH1Q12117 320 aaPredicted RBP7.14□□□□□ -1.27
UME1YPL139C ATP12P22135 325 aa7.13□□□□□ -1.27
UME1YPL139C CWP1P28319 239 aa7.13□□□□□ -1.27
UME1YPL139C HEM3P28789 327 aa7.13□□□□□ -1.27
UME1YPL139C UME6P39001 836 aa7.13□□□□□ -1.27
UME1YPL139C SAE2P46946 345 aa7.13□□□□□ -1.27
UME1YPL139C TIS11P47977 285 aa7.13□□□□□ -1.27
UME1YPL139C BUD32P53323 261 aa7.13□□□□□ -1.27
UME1YPL139C HST2P53686 357 aa7.13□□□□□ -1.27
UME1YPL139C RPL22BP56628 122 aaKnown RBP7.13□□□□□ -1.27
UME1YPL139C CDC123Q05791 360 aa7.13□□□□□ -1.27
UME1YPL139C STP3Q05937 343 aa7.13□□□□□ -1.27
UME1YPL139C NUS1Q12063 375 aa7.13□□□□□ -1.27
UME1YPL139C HRP1Q99383 534 aaKnown RBP7.13□□□□□ -1.27
UME1YPL139C TRA1P38811 3744 aa7.13□□□□□ -1.27
UME1YPL139C SPO16P17122 198 aa7.12□□□□□ -1.27
UME1YPL139C SEC14P24280 304 aaKnown RBP7.12□□□□□ -1.27
UME1YPL139C PHO84P25297 587 aaKnown RBP7.12□□□□□ -1.27
UME1YPL139C RSC6P25632 483 aa7.12□□□□□ -1.27
UME1YPL139C YSW1P38280 609 aa7.12□□□□□ -1.27
UME1YPL139C STN1P38960 494 aa7.12□□□□□ -1.27
UME1YPL139C CFD1P40558 293 aa7.12□□□□□ -1.27
UME1YPL139C SSU1P41930 458 aa7.12□□□□□ -1.27
UME1YPL139C FET5P43561 622 aa7.12□□□□□ -1.27
UME1YPL139C YFR020WP43600 232 aa7.12□□□□□ -1.27
UME1YPL139C NUP85P46673 744 aa7.12□□□□□ -1.27
UME1YPL139C COG6P53959 839 aa7.12□□□□□ -1.27
UME1YPL139C ADE12P80210 433 aaKnown RBP7.12□□□□□ -1.27
UME1YPL139C NPL3Q01560 414 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
UME1YPL139C BUD22Q04347 519 aaKnown RBP7.12□□□□□ -1.27
UME1YPL139C BNA5Q05979 453 aa7.12□□□□□ -1.27
UME1YPL139C ERF2Q06551 359 aa7.12□□□□□ -1.27
UME1YPL139C ATG23Q06671 453 aa7.12□□□□□ -1.27
UME1YPL139C SYT1Q06836 1226 aa7.12□□□□□ -1.27
UME1YPL139C ADY3Q07732 790 aa7.12□□□□□ -1.27
UME1YPL139C YMR030W-AQ3E760 96 aa7.12□□□□□ -1.27
UME1YPL139C STT4P37297 1900 aa7.12□□□□□ -1.27
UME1YPL139C YBR056W-AI2HB52 66 aa7.11□□□□□ -1.27
UME1YPL139C ABF1P14164 731 aa7.11□□□□□ -1.27
UME1YPL139C HRR25P29295 494 aaKnown RBP7.11□□□□□ -1.27
UME1YPL139C ATP11P32453 318 aa7.11□□□□□ -1.27
UME1YPL139C THI80P35202 319 aa7.11□□□□□ -1.27
UME1YPL139C MRPL37P36532 105 aa7.11□□□□□ -1.27
UME1YPL139C PIM1P36775 1133 aa7.11□□□□□ -1.27
UME1YPL139C SOL2P37262 315 aa7.11□□□□□ -1.27
UME1YPL139C YAL037WP39728 267 aa7.11□□□□□ -1.27
UME1YPL139C YMR027WQ04371 470 aa7.11□□□□□ -1.27
UME1YPL139C RSC3Q06639 885 aa7.11□□□□□ -1.27
UME1YPL139C PST1Q12355 444 aa7.11□□□□□ -1.27
UME1YPL139C ICT1Q12385 394 aa7.11□□□□□ -1.27
UME1YPL139C BRR2P32639 2163 aaKnown RBP7.11□□□□□ -1.27
UME1YPL139C RIP1P08067 215 aa7.1□□□□□ -1.27
UME1YPL139C YEL043WP32618 956 aa7.1□□□□□ -1.27
UME1YPL139C WBP1P33767 430 aaKnown RBP7.1□□□□□ -1.27
UME1YPL139C TIP20P33891 701 aa7.1□□□□□ -1.27
UME1YPL139C PEX5P35056 612 aa7.1□□□□□ -1.27
UME1YPL139C BYE1P36106 594 aa7.1□□□□□ -1.27
UME1YPL139C ARA1P38115 344 aa7.1□□□□□ -1.27
UME1YPL139C MUM2P38236 366 aa7.1□□□□□ -1.27
UME1YPL139C YHR020WP38708 688 aaKnown RBP7.1□□□□□ -1.27
UME1YPL139C HSE1P38753 452 aa7.1□□□□□ -1.27
UME1YPL139C MNN1P39106 762 aa7.1□□□□□ -1.27
UME1YPL139C YFR018CP43599 363 aa7.1□□□□□ -1.27
UME1YPL139C SGF73P53165 657 aa7.1□□□□□ -1.27
UME1YPL139C MAL13P53338 473 aa7.1□□□□□ -1.27
UME1YPL139C TGL2P54857 326 aa7.1□□□□□ -1.27
UME1YPL139C BLS1Q06071 122 aa7.1□□□□□ -1.27
UME1YPL139C YOL073CQ08232 322 aa7.1□□□□□ -1.27
UME1YPL139C RIO1Q12196 484 aaKnown RBP7.1□□□□□ -1.27
UME1YPL139C GPR1Q12361 961 aa7.1□□□□□ -1.27
UME1YPL139C SEC53P07283 254 aaKnown RBP7.09□□□□□ -1.27
UME1YPL139C PBS2P08018 668 aa7.09□□□□□ -1.27
UME1YPL139C ILS1P09436 1072 aaKnown RBP7.09□□□□□ -1.27
UME1YPL139C HSP60P19882 572 aaKnown RBP7.09□□□□□ -1.27
UME1YPL139C KAR4P25583 335 aa7.09□□□□□ -1.27
UME1YPL139C AAD3P25612 363 aa7.09□□□□□ -1.27
UME1YPL139C BEM3P32873 1128 aa7.09□□□□□ -1.27
UME1YPL139C UBC6P33296 250 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms