RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W AFG3P39925 761 aa4□□□□□ -1.77
HSH49YOR319W BOP3P53958 396 aa4□□□□□ -1.77
HSH49YOR319W ZDS2P54786 942 aa4□□□□□ -1.77
HSH49YOR319W YDR131CQ03899 556 aa4□□□□□ -1.77
HSH49YOR319W LUC7Q07508 261 aaPredicted RBP4□□□□□ -1.77
HSH49YOR319W LEA1Q08963 238 aaPredicted RBP4□□□□□ -1.77
HSH49YOR319W ATG29Q12092 213 aa4□□□□□ -1.77
HSH49YOR319W INP53Q12271 1107 aa4□□□□□ -1.77
HSH49YOR319W ISA2Q12425 185 aa4□□□□□ -1.77
HSH49YOR319W AVL9Q12500 764 aa4□□□□□ -1.77
HSH49YOR319W PMS1P14242 873 aa3.99□□□□□ -1.77
HSH49YOR319W MBR1P23493 339 aa3.99□□□□□ -1.77
HSH49YOR319W SNU114P36048 1008 aaKnown RBP3.99□□□□□ -1.77
HSH49YOR319W OTU2P38747 307 aaKnown RBP3.99□□□□□ -1.77
HSH49YOR319W LRP1P38801 184 aaKnown RBP3.99□□□□□ -1.77
HSH49YOR319W BUR6P40096 142 aa3.99□□□□□ -1.77
HSH49YOR319W DOT5P40553 215 aa3.99□□□□□ -1.77
HSH49YOR319W FAR3P46671 204 aa3.99□□□□□ -1.77
HSH49YOR319W YNL058CP53947 316 aa3.99□□□□□ -1.77
HSH49YOR319W ERO1Q03103 563 aa3.99□□□□□ -1.77
HSH49YOR319W VPS38Q05919 439 aa3.99□□□□□ -1.77
HSH49YOR319W MRD1Q06106 887 aaKnown RBP3.99□□□□□ -1.77
HSH49YOR319W IRC3Q06683 689 aa3.99□□□□□ -1.77
HSH49YOR319W CYK3Q07533 885 aa3.99□□□□□ -1.77
HSH49YOR319W ATG9Q12142 997 aa3.99□□□□□ -1.77
HSH49YOR319W PTC6P25646 442 aa3.98□□□□□ -1.77
HSH49YOR319W SEF1P34228 1148 aa3.98□□□□□ -1.77
HSH49YOR319W ADE17P38009 592 aaKnown RBP3.98□□□□□ -1.77
HSH49YOR319W SCS3P53012 380 aa3.98□□□□□ -1.77
HSH49YOR319W YGR127WP53275 312 aa3.98□□□□□ -1.77
HSH49YOR319W EFM6P53970 246 aa3.98□□□□□ -1.77
HSH49YOR319W VPS9P54787 451 aa3.98□□□□□ -1.77
HSH49YOR319W CIK1Q01649 594 aa3.98□□□□□ -1.77
HSH49YOR319W FIN1Q03898 291 aa3.98□□□□□ -1.77
HSH49YOR319W RQC1Q05468 723 aaKnown RBP3.98□□□□□ -1.77
HSH49YOR319W ECM22Q05958 814 aaPredicted RBP3.98□□□□□ -1.77
HSH49YOR319W RAD34Q06665 692 aa3.98□□□□□ -1.77
HSH49YOR319W ETT1Q08421 412 aaKnown RBP3.98□□□□□ -1.77
HSH49YOR319W YOL159C-AQ3E769 90 aa3.98□□□□□ -1.77
HSH49YOR319W YRF1-4O13559 1382 aa3.98□□□□□ -1.77
HSH49YOR319W EST1P17214 699 aaPredicted RBP3.97□□□□□ -1.77
HSH49YOR319W SPE2P21182 396 aa3.97□□□□□ -1.77
HSH49YOR319W REC107P21651 314 aa3.97□□□□□ -1.77
HSH49YOR319W ADK2P26364 225 aa3.97□□□□□ -1.77
HSH49YOR319W GSH1P32477 678 aa3.97□□□□□ -1.77
HSH49YOR319W SSE2P32590 693 aaKnown RBP3.97□□□□□ -1.77
HSH49YOR319W RPC34P32910 317 aa3.97□□□□□ -1.77
HSH49YOR319W WBP1P33767 430 aaKnown RBP3.97□□□□□ -1.77
HSH49YOR319W CMC1P36064 111 aa3.97□□□□□ -1.77
HSH49YOR319W TCD2P36101 447 aaKnown RBP3.97□□□□□ -1.77
HSH49YOR319W MNN2P38069 597 aa3.97□□□□□ -1.77
HSH49YOR319W ALG5P40350 334 aa3.97□□□□□ -1.77
HSH49YOR319W JEM1P40358 645 aa3.97□□□□□ -1.77
HSH49YOR319W ULP2P40537 1034 aaPredicted RBP3.97□□□□□ -1.77
HSH49YOR319W SGN1P40561 250 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
HSH49YOR319W MAF1P41910 395 aa3.97□□□□□ -1.77
HSH49YOR319W SSU1P41930 458 aa3.97□□□□□ -1.77
HSH49YOR319W SMC3P47037 1230 aa3.97□□□□□ -1.77
HSH49YOR319W IRC8P47046 822 aa3.97□□□□□ -1.77
HSH49YOR319W PET130P47065 347 aa3.97□□□□□ -1.77
HSH49YOR319W APT1P49435 187 aaKnown RBP3.97□□□□□ -1.77
HSH49YOR319W TWF1P53250 332 aa3.97□□□□□ -1.77
HSH49YOR319W MAK10Q02197 733 aa3.97□□□□□ -1.77
HSH49YOR319W YLR345WQ06137 509 aa3.97□□□□□ -1.77
HSH49YOR319W LEU9Q12166 604 aaKnown RBP3.97□□□□□ -1.77
HSH49YOR319W RTC1Q08281 1341 aa3.96□□□□□ -1.77
HSH49YOR319W GAL80P04387 435 aa3.96□□□□□ -1.78
HSH49YOR319W PET111P08468 800 aa3.96□□□□□ -1.78
HSH49YOR319W ILS1P09436 1072 aaKnown RBP3.96□□□□□ -1.78
HSH49YOR319W MRP2P10663 115 aaPredicted RBP3.96□□□□□ -1.78
HSH49YOR319W PRD1P25375 712 aa3.96□□□□□ -1.78
HSH49YOR319W PUP3P25451 205 aaKnown RBP3.96□□□□□ -1.78
HSH49YOR319W SYN8P31377 255 aa3.96□□□□□ -1.78
HSH49YOR319W MRE11P32829 692 aa3.96□□□□□ -1.78
HSH49YOR319W SAS3P34218 831 aa3.96□□□□□ -1.78
HSH49YOR319W YFR020WP43600 232 aa3.96□□□□□ -1.78
HSH49YOR319W YJL043WP47053 257 aa3.96□□□□□ -1.78
HSH49YOR319W IMD4P50094 524 aaKnown RBP3.96□□□□□ -1.78
HSH49YOR319W SGF73P53165 657 aa3.96□□□□□ -1.78
HSH49YOR319W OGG1P53397 376 aaPredicted RBP3.96□□□□□ -1.78
HSH49YOR319W ATP23P53722 227 aa3.96□□□□□ -1.78
HSH49YOR319W YDR239CQ03780 787 aa3.96□□□□□ -1.78
HSH49YOR319W ERB1Q04660 807 aaKnown RBP3.96□□□□□ -1.78
HSH49YOR319W THI3Q07471 609 aa3.96□□□□□ -1.78
HSH49YOR319W RGT2Q12300 763 aa3.96□□□□□ -1.78
HSH49YOR319W SEC3P33332 1336 aaKnown RBP3.95□□□□□ -1.78
HSH49YOR319W SGS1P35187 1447 aa3.95□□□□□ -1.78
HSH49YOR319W AQY1P0CD91 305 aa3.95□□□□□ -1.78
HSH49YOR319W PDA1P16387 420 aaKnown RBP3.95□□□□□ -1.78
HSH49YOR319W CLC1P17891 233 aa3.95□□□□□ -1.78
HSH49YOR319W GSY2P27472 705 aa3.95□□□□□ -1.78
HSH49YOR319W SEC66P33754 206 aa3.95□□□□□ -1.78
HSH49YOR319W STB6P36085 766 aa3.95□□□□□ -1.78
HSH49YOR319W APD1P38281 316 aa3.95□□□□□ -1.78
HSH49YOR319W ELO1P39540 310 aa3.95□□□□□ -1.78
HSH49YOR319W PSA1P41940 361 aaKnown RBP3.95□□□□□ -1.78
HSH49YOR319W HXT14P42833 540 aa3.95□□□□□ -1.78
HSH49YOR319W DPB4Q04603 196 aaKnown RBP3.95□□□□□ -1.78
HSH49YOR319W RLM1Q12224 676 aa3.95□□□□□ -1.78
HSH49YOR319W SEC39Q12745 709 aa3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms