RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W PPH21P23594 369 aa6.58□□□□□ -1.36
LSC1YOR142W OCA5P38738 679 aa6.58□□□□□ -1.36
LSC1YOR142W YEL073CP39974 107 aa6.58□□□□□ -1.36
LSC1YOR142W GAT1P43574 510 aa6.58□□□□□ -1.36
LSC1YOR142W DUG1P43616 481 aaKnown RBP6.58□□□□□ -1.36
LSC1YOR142W BIR1P47134 954 aa6.58□□□□□ -1.36
LSC1YOR142W KTR5P53966 522 aaPredicted RBP6.58□□□□□ -1.36
LSC1YOR142W YAT1P80235 687 aa6.58□□□□□ -1.36
LSC1YOR142W SPP2Q02521 185 aa6.58□□□□□ -1.36
LSC1YOR142W TRM12Q04235 462 aa6.58□□□□□ -1.36
LSC1YOR142W BLS1Q06071 122 aa6.58□□□□□ -1.36
LSC1YOR142W VTA1Q06263 330 aa6.58□□□□□ -1.36
LSC1YOR142W EAF1Q06337 982 aa6.58□□□□□ -1.36
LSC1YOR142W FRA1Q07825 749 aa6.58□□□□□ -1.36
LSC1YOR142W ICT1Q12385 394 aa6.58□□□□□ -1.36
LSC1YOR142W ARG4P04076 463 aaPredicted RBP6.57□□□□□ -1.36
LSC1YOR142W SEC53P07283 254 aaKnown RBP6.57□□□□□ -1.36
LSC1YOR142W ILV2P07342 687 aaKnown RBP6.57□□□□□ -1.36
LSC1YOR142W RED1P14291 827 aa6.57□□□□□ -1.36
LSC1YOR142W RSC6P25632 483 aa6.57□□□□□ -1.36
LSC1YOR142W MF(ALPHA)2P32435 120 aa6.57□□□□□ -1.36
LSC1YOR142W GCD11P32481 527 aaKnown RBP6.57□□□□□ -1.36
LSC1YOR142W YME1P32795 747 aa6.57□□□□□ -1.36
LSC1YOR142W CYM1P32898 989 aa6.57□□□□□ -1.36
LSC1YOR142W THI80P35202 319 aa6.57□□□□□ -1.36
LSC1YOR142W DED81P38707 554 aaKnown RBP6.57□□□□□ -1.36
LSC1YOR142W UBA4P38820 440 aa6.57□□□□□ -1.36
LSC1YOR142W CCT2P39076 527 aaKnown RBP6.57□□□□□ -1.36
LSC1YOR142W ELO1P39540 310 aa6.57□□□□□ -1.36
LSC1YOR142W ZIM17P42844 174 aa6.57□□□□□ -1.36
LSC1YOR142W PET130P47065 347 aa6.57□□□□□ -1.36
LSC1YOR142W URB2P47108 1174 aa6.57□□□□□ -1.36
LSC1YOR142W HXT16P47185 567 aa6.57□□□□□ -1.36
LSC1YOR142W HXT15P54854 567 aa6.57□□□□□ -1.36
LSC1YOR142W ROT1Q03691 256 aa6.57□□□□□ -1.36
LSC1YOR142W RSC3Q06639 885 aa6.57□□□□□ -1.36
LSC1YOR142W ALR1Q08269 859 aa6.57□□□□□ -1.36
LSC1YOR142W SLP1Q12232 587 aa6.57□□□□□ -1.36
LSC1YOR142W SSC1P0CS90 654 aaKnown RBP6.56□□□□□ -1.36
LSC1YOR142W RNQ1P25367 405 aa6.56□□□□□ -1.36
LSC1YOR142W NRP1P32770 719 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
LSC1YOR142W TIP20P33891 701 aa6.56□□□□□ -1.36
LSC1YOR142W MUM2P38236 366 aa6.56□□□□□ -1.36
LSC1YOR142W YHR020WP38708 688 aaKnown RBP6.56□□□□□ -1.36
LSC1YOR142W HSE1P38753 452 aa6.56□□□□□ -1.36
LSC1YOR142W FAA3P39002 694 aa6.56□□□□□ -1.36
LSC1YOR142W SSN3P39073 555 aa6.56□□□□□ -1.36
LSC1YOR142W HOS4P40480 1083 aa6.56□□□□□ -1.36
LSC1YOR142W NUP85P46673 744 aa6.56□□□□□ -1.36
LSC1YOR142W TIS11P47977 285 aa6.56□□□□□ -1.36
LSC1YOR142W BIO4P53630 237 aa6.56□□□□□ -1.36
LSC1YOR142W HST3P53687 447 aa6.56□□□□□ -1.36
LSC1YOR142W NRM1P53718 249 aa6.56□□□□□ -1.36
LSC1YOR142W AAT1Q01802 451 aa6.56□□□□□ -1.36
LSC1YOR142W CCE1Q03702 353 aa6.56□□□□□ -1.36
LSC1YOR142W USA1Q03714 838 aa6.56□□□□□ -1.36
LSC1YOR142W SSL1Q04673 461 aaPredicted RBP6.56□□□□□ -1.36
LSC1YOR142W CRN1Q06440 651 aa6.56□□□□□ -1.36
LSC1YOR142W UBX3Q12229 455 aa6.56□□□□□ -1.36
LSC1YOR142W YOR012WQ12351 137 aa6.56□□□□□ -1.36
LSC1YOR142W GTT2Q12390 233 aa6.56□□□□□ -1.36
LSC1YOR142W BRR2P32639 2163 aaKnown RBP6.56□□□□□ -1.36
LSC1YOR142W HFA1P32874 2273 aa6.55□□□□□ -1.36
LSC1YOR142W SEM1O94742 89 aa6.55□□□□□ -1.36
LSC1YOR142W SWI5P08153 709 aa6.55□□□□□ -1.36
LSC1YOR142W ABF1P14164 731 aa6.55□□□□□ -1.36
LSC1YOR142W MRPL25P23369 157 aa6.55□□□□□ -1.36
LSC1YOR142W AAD3P25612 363 aa6.55□□□□□ -1.36
LSC1YOR142W HRR25P29295 494 aaKnown RBP6.55□□□□□ -1.36
LSC1YOR142W RIM1P32445 135 aaKnown RBP6.55□□□□□ -1.36
LSC1YOR142W ATP11P32453 318 aa6.55□□□□□ -1.36
LSC1YOR142W MRPL37P36532 105 aa6.55□□□□□ -1.36
LSC1YOR142W MUP3P38734 546 aa6.55□□□□□ -1.36
LSC1YOR142W SPC97P38863 823 aa6.55□□□□□ -1.36
LSC1YOR142W MPT5P39016 859 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
LSC1YOR142W CEM1P39525 442 aa6.55□□□□□ -1.36
LSC1YOR142W HAT2P39984 401 aa6.55□□□□□ -1.36
LSC1YOR142W UTP18P40362 594 aaPredicted RBP6.55□□□□□ -1.36
LSC1YOR142W SSU1P41930 458 aa6.55□□□□□ -1.36
LSC1YOR142W YJL107CP42947 387 aa6.55□□□□□ -1.36
LSC1YOR142W ZRG17P53735 605 aa6.55□□□□□ -1.36
LSC1YOR142W NAM8Q00539 523 aaKnown RBP6.55□□□□□ -1.36
LSC1YOR142W YMR209CQ03648 457 aa6.55□□□□□ -1.36
LSC1YOR142W YAR066WP0CX18 203 aa6.54□□□□□ -1.36
LSC1YOR142W YHR214WP0CX19 203 aa6.54□□□□□ -1.36
LSC1YOR142W GCY1P14065 312 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
LSC1YOR142W PTM1P32857 523 aa6.54□□□□□ -1.36
LSC1YOR142W RPF2P36160 344 aaKnown RBP6.54□□□□□ -1.36
LSC1YOR142W PIM1P36775 1133 aa6.54□□□□□ -1.36
LSC1YOR142W SOL2P37262 315 aa6.54□□□□□ -1.36
LSC1YOR142W EFM1P38732 585 aa6.54□□□□□ -1.36
LSC1YOR142W YAL037WP39728 267 aa6.54□□□□□ -1.36
LSC1YOR142W SAP1P39955 897 aaKnown RBP6.54□□□□□ -1.36
LSC1YOR142W PFA3P42836 336 aa6.54□□□□□ -1.36
LSC1YOR142W FET5P43561 622 aa6.54□□□□□ -1.36
LSC1YOR142W BOL2P53082 120 aa6.54□□□□□ -1.36
LSC1YOR142W GOT1Q03554 138 aa6.54□□□□□ -1.36
LSC1YOR142W CTK1Q03957 528 aaKnown RBP6.54□□□□□ -1.36
LSC1YOR142W BNA5Q05979 453 aa6.54□□□□□ -1.36
LSC1YOR142W YLR177WQ06251 628 aa6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 384.8 ms