RNA–Protein interactions for RNA: YNL287W

SEC21, Transcript of Gamma subunit of coatomer, yeastyeast

Gene SEC21, Length 2,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC21YNL287W SRD1P09007 221 aa1.4□□□□□ -2.18
SEC21YNL287W POL3P15436 1097 aa1.4□□□□□ -2.18
SEC21YNL287W FUS3P16892 353 aaKnown RBP1.4□□□□□ -2.18
SEC21YNL287W SEC18P18759 758 aaKnown RBP1.4□□□□□ -2.18
SEC21YNL287W MRPL8P22353 238 aa1.4□□□□□ -2.18
SEC21YNL287W ARE1P25628 610 aa1.4□□□□□ -2.18
SEC21YNL287W PCL2P25693 308 aa1.4□□□□□ -2.18
SEC21YNL287W ADK2P26364 225 aa1.4□□□□□ -2.18
SEC21YNL287W PHO91P27514 894 aa1.4□□□□□ -2.18
SEC21YNL287W LHS1P36016 881 aa1.4□□□□□ -2.18
SEC21YNL287W YPT52P36018 234 aaKnown RBP1.4□□□□□ -2.18
SEC21YNL287W YKR015CP36111 568 aa1.4□□□□□ -2.18
SEC21YNL287W CHK1P38147 527 aa1.4□□□□□ -2.18
SEC21YNL287W MED8P38304 223 aa1.4□□□□□ -2.18
SEC21YNL287W BIT2P38346 545 aa1.4□□□□□ -2.18
SEC21YNL287W RTC3P38804 111 aaPredicted RBP1.4□□□□□ -2.18
SEC21YNL287W FLC2P39719 783 aa1.4□□□□□ -2.18
SEC21YNL287W SAP1P39955 897 aaKnown RBP1.4□□□□□ -2.18
SEC21YNL287W EDC3P39998 551 aaKnown RBP1.4□□□□□ -2.18
SEC21YNL287W MSS2P40990 351 aa1.4□□□□□ -2.18
SEC21YNL287W DLD2P46681 530 aaKnown RBP1.4□□□□□ -2.18
SEC21YNL287W SNX4P47057 423 aa1.4□□□□□ -2.18
SEC21YNL287W LIA1P47120 325 aaKnown RBP1.4□□□□□ -2.18
SEC21YNL287W YJR096WP47137 282 aa1.4□□□□□ -2.18
SEC21YNL287W SSN8P47821 323 aa1.4□□□□□ -2.18
SEC21YNL287W AIM14P53109 570 aa1.4□□□□□ -2.18
SEC21YNL287W MET13P53128 600 aa1.4□□□□□ -2.18
SEC21YNL287W LCL3P53153 274 aa1.4□□□□□ -2.18
SEC21YNL287W CGR1P53188 120 aa1.4□□□□□ -2.18
SEC21YNL287W BRE5P53741 515 aaKnown RBP1.4□□□□□ -2.18
SEC21YNL287W RSN1Q03516 953 aa1.4□□□□□ -2.18
SEC21YNL287W MSC3Q05812 728 aa1.4□□□□□ -2.18
SEC21YNL287W BLS1Q06071 122 aa1.4□□□□□ -2.18
SEC21YNL287W SPH1Q06160 661 aa1.4□□□□□ -2.18
SEC21YNL287W SEC10Q06245 871 aa1.4□□□□□ -2.18
SEC21YNL287W CMS1Q07897 291 aaKnown RBP1.4□□□□□ -2.18
SEC21YNL287W DNL4Q08387 944 aaPredicted RBP1.4□□□□□ -2.18
SEC21YNL287W RGT2Q12300 763 aa1.4□□□□□ -2.18
SEC21YNL287W RTN2Q12443 393 aa1.4□□□□□ -2.18
SEC21YNL287W PHO5P00635 467 aa1.4□□□□□ -2.19
SEC21YNL287W LEU2P04173 364 aaPredicted RBP1.4□□□□□ -2.19
SEC21YNL287W HXK2P04807 486 aaKnown RBP1.4□□□□□ -2.19
SEC21YNL287W ARG3P05150 338 aa1.4□□□□□ -2.19
SEC21YNL287W RPS3P05750 240 aaKnown RBP1.4□□□□□ -2.19
SEC21YNL287W RAD18P10862 487 aa1.4□□□□□ -2.19
SEC21YNL287W UNG1P12887 359 aa1.4□□□□□ -2.19
SEC21YNL287W GUK1P15454 187 aaKnown RBP1.4□□□□□ -2.19
SEC21YNL287W PRP16P15938 1071 aaPredicted RBP1.4□□□□□ -2.19
SEC21YNL287W PFK2P16862 959 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
SEC21YNL287W CDC42P19073 191 aa1.4□□□□□ -2.19
SEC21YNL287W PRP2P20095 876 aaPredicted RBP1.4□□□□□ -2.19
SEC21YNL287W APA2P22108 325 aa1.4□□□□□ -2.19
SEC21YNL287W RPI1P23250 407 aaKnown RBP1.4□□□□□ -2.19
SEC21YNL287W VBA3P25594 458 aa1.4□□□□□ -2.19
SEC21YNL287W MSS1P32559 526 aaPredicted RBP1.4□□□□□ -2.19
SEC21YNL287W YKU70P32807 602 aa1.4□□□□□ -2.19
SEC21YNL287W UBC6P33296 250 aaPredicted RBP1.4□□□□□ -2.19
SEC21YNL287W SDS22P36047 338 aa1.4□□□□□ -2.19
SEC21YNL287W MCD4P36051 919 aa1.4□□□□□ -2.19
SEC21YNL287W HEL1P36113 551 aa1.4□□□□□ -2.19
SEC21YNL287W GMH1P36125 273 aa1.4□□□□□ -2.19
SEC21YNL287W NUP133P36161 1157 aa1.4□□□□□ -2.19
SEC21YNL287W ADE17P38009 592 aaKnown RBP1.4□□□□□ -2.19
SEC21YNL287W THI6P41835 540 aa1.4□□□□□ -2.19
SEC21YNL287W APS3P47064 194 aa1.4□□□□□ -2.19
SEC21YNL287W URB2P47108 1174 aa1.4□□□□□ -2.19
SEC21YNL287W YDL183CP48569 320 aa1.4□□□□□ -2.19
SEC21YNL287W VMA10P48836 114 aaKnown RBP1.4□□□□□ -2.19
SEC21YNL287W RMR1P53060 241 aa1.4□□□□□ -2.19
SEC21YNL287W DSD1P53095 428 aa1.4□□□□□ -2.19
SEC21YNL287W COQ6P53318 479 aa1.4□□□□□ -2.19
SEC21YNL287W PDR16P53860 351 aaKnown RBP1.4□□□□□ -2.19
SEC21YNL287W CNM67P53865 581 aaKnown RBP1.4□□□□□ -2.19
SEC21YNL287W EAF7P53911 425 aaKnown RBP1.4□□□□□ -2.19
SEC21YNL287W ESBP6P53918 673 aa1.4□□□□□ -2.19
SEC21YNL287W EOS1P53938 366 aa1.4□□□□□ -2.19
SEC21YNL287W RLI1Q03195 608 aaKnown RBP1.4□□□□□ -2.19
SEC21YNL287W RBS1Q05672 457 aaKnown RBP1.4□□□□□ -2.19
SEC21YNL287W DSE3Q08729 430 aa1.4□□□□□ -2.19
SEC21YNL287W VIK1Q12045 647 aa1.4□□□□□ -2.19
SEC21YNL287W MED4Q12343 284 aa1.4□□□□□ -2.19
SEC21YNL287W GIS3Q12418 502 aa1.4□□□□□ -2.19
SEC21YNL287W ISA2Q12425 185 aa1.4□□□□□ -2.19
SEC21YNL287W NOT5Q12514 560 aaPredicted RBP1.4□□□□□ -2.19
SEC21YNL287W CMC2Q3E7A4 109 aa1.4□□□□□ -2.19
SEC21YNL287W SWI1P09547 1314 aa1.4□□□□□ -2.19
SEC21YNL287W LAM4P38800 1345 aa1.4□□□□□ -2.19
SEC21YNL287W CDC36P06100 191 aaPredicted RBP1.39□□□□□ -2.19
SEC21YNL287W TPK1P06244 397 aa1.39□□□□□ -2.19
SEC21YNL287W MTF2P10849 440 aa1.39□□□□□ -2.19
SEC21YNL287W DAP2P18962 818 aa1.39□□□□□ -2.19
SEC21YNL287W RNR1P21524 888 aaKnown RBP1.39□□□□□ -2.19
SEC21YNL287W SGF29P25554 259 aa1.39□□□□□ -2.19
SEC21YNL287W MEI4P29467 408 aa1.39□□□□□ -2.19
SEC21YNL287W VPH2P32341 215 aa1.39□□□□□ -2.19
SEC21YNL287W HXT1P32465 570 aa1.39□□□□□ -2.19
SEC21YNL287W ERG1P32476 496 aaKnown RBP1.39□□□□□ -2.19
SEC21YNL287W CSE1P33307 960 aa1.39□□□□□ -2.19
SEC21YNL287W GDH2P33327 1092 aaKnown RBP1.39□□□□□ -2.19
SEC21YNL287W GCS1P35197 352 aa1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms