RNA–Protein interactions for RNA: YNL078W

NIS1, Transcript of Protein localized in the bud neck at G2/M phase, yeast

Gene NIS1, Length 1,224 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIS1	YNL078W	FRD1	P32614	470 aa	Known RBP	4.05	□□□□□ -1.76
NIS1	YNL078W	GDA1	P32621	518 aa		4.05	□□□□□ -1.76
NIS1	YNL078W	ATO2	P32907	282 aa		4.05	□□□□□ -1.76
NIS1	YNL078W	RPC34	P32910	317 aa		4.05	□□□□□ -1.76
NIS1	YNL078W	ARO9	P38840	513 aa	Predicted RBP	4.05	□□□□□ -1.76
NIS1	YNL078W	TDA11	P38854	504 aa		4.05	□□□□□ -1.76
NIS1	YNL078W	RTS1	P38903	757 aa		4.05	□□□□□ -1.76
NIS1	YNL078W	CCT2	P39076	527 aa	Known RBP	4.05	□□□□□ -1.76
NIS1	YNL078W	KAP123	P40069	1113 aa	Known RBP	4.05	□□□□□ -1.76
NIS1	YNL078W	YNL320W	P42840	284 aa		4.05	□□□□□ -1.76
NIS1	YNL078W	FYV8	P46949	817 aa	Known RBP	4.05	□□□□□ -1.76
NIS1	YNL078W	IST1	P53843	298 aa	Predicted RBP	4.05	□□□□□ -1.76
NIS1	YNL078W	YNL247W	P53852	767 aa	Known RBP	4.05	□□□□□ -1.76
NIS1	YNL078W	YNL144C	P53907	740 aa		4.05	□□□□□ -1.76
NIS1	YNL078W	TEP1	P53916	434 aa		4.05	□□□□□ -1.76
NIS1	YNL078W	ASI1	P54074	624 aa		4.05	□□□□□ -1.76
NIS1	YNL078W	RPT6	Q01939	405 aa	Known RBP	4.05	□□□□□ -1.76
NIS1	YNL078W	TLG1	Q03322	224 aa		4.05	□□□□□ -1.76
NIS1	YNL078W	EBS1	Q03466	884 aa	Known RBP	4.05	□□□□□ -1.76
NIS1	YNL078W	RAD33	Q04231	177 aa		4.05	□□□□□ -1.76
NIS1	YNL078W	SOV1	Q04748	898 aa		4.05	□□□□□ -1.76
NIS1	YNL078W	NEW1	Q08972	1196 aa	Known RBP	4.05	□□□□□ -1.76
NIS1	YNL078W	ICL2	Q12031	575 aa		4.05	□□□□□ -1.76
NIS1	YNL078W	FRE7	Q12333	620 aa		4.05	□□□□□ -1.76
NIS1	YNL078W	YMR085W	P0CF18	432 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	CLN1	P20437	546 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	VPS1	P21576	704 aa	Known RBP	4.04	□□□□□ -1.76
NIS1	YNL078W	HXT1	P32465	570 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	ORC2	P32833	620 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	CSE1	P33307	960 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	RIB7	P33312	244 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	SPP381	P38282	291 aa	Predicted RBP	4.04	□□□□□ -1.76
NIS1	YNL078W	SIP3	P38717	1229 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	STT3	P39007	718 aa	Known RBP	4.04	□□□□□ -1.76
NIS1	YNL078W	STB1	P42845	420 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	BST1	P43571	1029 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	AIP1	P46680	615 aa	Known RBP	4.04	□□□□□ -1.76
NIS1	YNL078W	SAE2	P46946	345 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	YJL043W	P47053	257 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	RBL2	P48606	106 aa	Known RBP	4.04	□□□□□ -1.76
NIS1	YNL078W	FMS1	P50264	508 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	VPS64	Q03944	604 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	PPM1	Q04081	328 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	URH1	Q04179	340 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	HRD3	Q05787	833 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	GGA1	Q06336	557 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	GPN2	Q08726	347 aa	Predicted RBP	4.04	□□□□□ -1.76
NIS1	YNL078W	TAF10	Q12030	206 aa		4.04	□□□□□ -1.76
NIS1	YNL078W	UTP10	P42945	1769 aa	Known RBP	4.04	□□□□□ -1.76
NIS1	YNL078W	SSK22	P25390	1331 aa	Predicted RBP	4.03	□□□□□ -1.76
NIS1	YNL078W	TY4B-H	P0C2J7	1802 aa		4.03	□□□□□ -1.76
NIS1	YNL078W	TY4B-J	P47024	1803 aa		4.03	□□□□□ -1.76
NIS1	YNL078W	NUP1	P20676	1076 aa		4.03	□□□□□ -1.76
NIS1	YNL078W	REC107	P21651	314 aa		4.03	□□□□□ -1.76
NIS1	YNL078W	APN1	P22936	367 aa		4.03	□□□□□ -1.76
NIS1	YNL078W	RPC19	P28000	142 aa	Known RBP	4.03	□□□□□ -1.76
NIS1	YNL078W	RPS0A	P32905	252 aa	Known RBP	4.03	□□□□□ -1.76
NIS1	YNL078W	KES1	P35844	434 aa	Known RBP	4.03	□□□□□ -1.76
NIS1	YNL078W	ADE16	P54113	591 aa	Known RBP	4.03	□□□□□ -1.76
NIS1	YNL078W	UBP16	Q02863	499 aa		4.03	□□□□□ -1.76
NIS1	YNL078W	GIR2	Q03768	265 aa	Predicted RBP	4.03	□□□□□ -1.76
NIS1	YNL078W	YMR114C	Q04471	368 aa	Known RBP	4.03	□□□□□ -1.76
NIS1	YNL078W	TMA64	Q04600	565 aa	Known RBP	4.03	□□□□□ -1.76
NIS1	YNL078W	YLR287C	Q05881	355 aa		4.03	□□□□□ -1.76
NIS1	YNL078W	MRD1	Q06106	887 aa	Known RBP	4.03	□□□□□ -1.76
NIS1	YNL078W	CSR1	Q06705	408 aa	Known RBP	4.03	□□□□□ -1.76
NIS1	YNL078W	AIM6	Q07716	390 aa		4.03	□□□□□ -1.76
NIS1	YNL078W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
NIS1	YNL078W	SIL1	Q08199	421 aa		4.03	□□□□□ -1.76
NIS1	YNL078W	CRT10	Q08226	957 aa		4.03	□□□□□ -1.76
NIS1	YNL078W	NCA2	Q12374	616 aa		4.03	□□□□□ -1.76
NIS1	YNL078W	AHA1	Q12449	350 aa	Known RBP	4.03	□□□□□ -1.76
NIS1	YNL078W	PGK1	P00560	416 aa	Known RBP	4.02	□□□□□ -1.77
NIS1	YNL078W	CHO2	P05374	869 aa	Known RBP	4.02	□□□□□ -1.77
NIS1	YNL078W	CTT1	P06115	562 aa		4.02	□□□□□ -1.77
NIS1	YNL078W	SUI3	P09064	285 aa	Known RBP	4.02	□□□□□ -1.77
NIS1	YNL078W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
NIS1	YNL078W	OPI1	P21957	404 aa		4.02	□□□□□ -1.77
NIS1	YNL078W	SWI4	P25302	1093 aa	Known RBP	4.02	□□□□□ -1.77
NIS1	YNL078W	BRF1	P29056	596 aa		4.02	□□□□□ -1.77
NIS1	YNL078W	BMH1	P29311	267 aa	Known RBP	4.02	□□□□□ -1.77
NIS1	YNL078W	NPL6	P32832	435 aa		4.02	□□□□□ -1.77
NIS1	YNL078W	PTH2	P34222	208 aa		4.02	□□□□□ -1.77
NIS1	YNL078W	YHL041W	P38730	149 aa		4.02	□□□□□ -1.77
NIS1	YNL078W	ERC1	P38767	581 aa		4.02	□□□□□ -1.77
NIS1	YNL078W	SPC72	P39723	622 aa		4.02	□□□□□ -1.77
NIS1	YNL078W	TIF4631	P39935	952 aa	Known RBP	4.02	□□□□□ -1.77
NIS1	YNL078W	SMX2	P40204	77 aa	Known RBP	4.02	□□□□□ -1.77
NIS1	YNL078W	OPT1	P40897	799 aa		4.02	□□□□□ -1.77
NIS1	YNL078W	URB2	P47108	1174 aa		4.02	□□□□□ -1.77
NIS1	YNL078W	YNL040W	P53960	456 aa	Predicted RBP	4.02	□□□□□ -1.77
NIS1	YNL078W	UBX4	P54730	416 aa		4.02	□□□□□ -1.77
NIS1	YNL078W	YKR005C	Q02203	525 aa		4.02	□□□□□ -1.77
NIS1	YNL078W	MUB1	Q03162	620 aa		4.02	□□□□□ -1.77
NIS1	YNL078W	RIM13	Q03792	727 aa		4.02	□□□□□ -1.77
NIS1	YNL078W	SXM1	Q04175	944 aa	Known RBP	4.02	□□□□□ -1.77
NIS1	YNL078W	CRF1	Q04930	467 aa		4.02	□□□□□ -1.77
NIS1	YNL078W	TSR1	Q07381	788 aa	Known RBP	4.02	□□□□□ -1.77
NIS1	YNL078W	YOL075C	Q08234	1294 aa		4.02	□□□□□ -1.77
NIS1	YNL078W	LCB4	Q12246	624 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms