RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W SMC6Q12749 1114 aa5.12□□□□□ -1.59
VPS36YLR417W GAL80P04387 435 aa5.11□□□□□ -1.59
VPS36YLR417W GPI10P30777 616 aa5.11□□□□□ -1.59
VPS36YLR417W TCD2P36101 447 aaKnown RBP5.11□□□□□ -1.59
VPS36YLR417W SRP72P38688 640 aaKnown RBP5.11□□□□□ -1.59
VPS36YLR417W IMD2P38697 523 aaKnown RBP5.11□□□□□ -1.59
VPS36YLR417W IMD3P50095 523 aaKnown RBP5.11□□□□□ -1.59
VPS36YLR417W FIN1Q03898 291 aa5.11□□□□□ -1.59
VPS36YLR417W YDR131CQ03899 556 aa5.11□□□□□ -1.59
VPS36YLR417W ECM22Q05958 814 aaPredicted RBP5.11□□□□□ -1.59
VPS36YLR417W YLR455WQ06188 304 aa5.11□□□□□ -1.59
VPS36YLR417W ETT1Q08421 412 aaKnown RBP5.11□□□□□ -1.59
VPS36YLR417W PUP3P25451 205 aaKnown RBP5.11□□□□□ -1.59
VPS36YLR417W MSS51P32335 436 aa5.11□□□□□ -1.59
VPS36YLR417W MRE11P32829 692 aa5.11□□□□□ -1.59
VPS36YLR417W ERV46P39727 415 aa5.11□□□□□ -1.59
VPS36YLR417W ALG5P40350 334 aa5.11□□□□□ -1.59
VPS36YLR417W CIN1P40987 1014 aa5.11□□□□□ -1.59
VPS36YLR417W TWF1P53250 332 aa5.11□□□□□ -1.59
VPS36YLR417W FMP30Q02883 468 aa5.11□□□□□ -1.59
VPS36YLR417W YDR239CQ03780 787 aa5.11□□□□□ -1.59
VPS36YLR417W DPB4Q04603 196 aaKnown RBP5.11□□□□□ -1.59
VPS36YLR417W MRD1Q06106 887 aaKnown RBP5.11□□□□□ -1.59
VPS36YLR417W YLR352WQ06479 807 aa5.11□□□□□ -1.59
VPS36YLR417W APL4Q12028 832 aa5.11□□□□□ -1.59
VPS36YLR417W ATG29Q12092 213 aa5.11□□□□□ -1.59
VPS36YLR417W YLR049CQ12110 428 aa5.11□□□□□ -1.59
VPS36YLR417W CHO1P08456 276 aa5.1□□□□□ -1.59
VPS36YLR417W PDA1P16387 420 aaKnown RBP5.1□□□□□ -1.59
VPS36YLR417W KGD1P20967 1014 aaKnown RBP5.1□□□□□ -1.59
VPS36YLR417W CLB3P24870 427 aa5.1□□□□□ -1.59
VPS36YLR417W WBP1P33767 430 aaKnown RBP5.1□□□□□ -1.59
VPS36YLR417W TIF3P34167 436 aaKnown RBP5.1□□□□□ -1.59
VPS36YLR417W MAF1P41910 395 aa5.1□□□□□ -1.59
VPS36YLR417W APT1P49435 187 aaKnown RBP5.1□□□□□ -1.59
VPS36YLR417W ORC5P50874 479 aa5.1□□□□□ -1.59
VPS36YLR417W SXM1Q04175 944 aaKnown RBP5.1□□□□□ -1.59
VPS36YLR417W BSP1Q06604 576 aa5.1□□□□□ -1.59
VPS36YLR417W YOL159C-AQ3E769 90 aa5.1□□□□□ -1.59
VPS36YLR417W RAP1P11938 827 aa5.09□□□□□ -1.59
VPS36YLR417W ADY2P25613 283 aa5.09□□□□□ -1.59
VPS36YLR417W CMC1P36064 111 aa5.09□□□□□ -1.59
VPS36YLR417W OTU2P38747 307 aaKnown RBP5.09□□□□□ -1.59
VPS36YLR417W PET130P47065 347 aa5.09□□□□□ -1.59
VPS36YLR417W IMD4P50094 524 aaKnown RBP5.09□□□□□ -1.59
VPS36YLR417W NNF2P53253 936 aa5.09□□□□□ -1.59
VPS36YLR417W YMR178WQ03219 274 aaKnown RBP5.09□□□□□ -1.59
VPS36YLR417W PFA5Q03289 374 aa5.09□□□□□ -1.59
VPS36YLR417W RQC1Q05468 723 aaKnown RBP5.09□□□□□ -1.59
VPS36YLR417W TKL1P23254 680 aaKnown RBP5.09□□□□□ -1.6
VPS36YLR417W IMG1P25626 169 aa5.09□□□□□ -1.6
VPS36YLR417W ADK2P26364 225 aa5.09□□□□□ -1.6
VPS36YLR417W SYN8P31377 255 aa5.09□□□□□ -1.6
VPS36YLR417W SAC1P32368 623 aaKnown RBP5.09□□□□□ -1.6
VPS36YLR417W TSC10P38342 320 aa5.09□□□□□ -1.6
VPS36YLR417W PTR3P43606 678 aa5.09□□□□□ -1.6
VPS36YLR417W YOL159CQ08300 171 aa5.09□□□□□ -1.6
VPS36YLR417W RLM1Q12224 676 aa5.09□□□□□ -1.6
VPS36YLR417W SEC39Q12745 709 aa5.09□□□□□ -1.6
VPS36YLR417W ILS1P09436 1072 aaKnown RBP5.08□□□□□ -1.6
VPS36YLR417W ART10P18634 518 aaKnown RBP5.08□□□□□ -1.6
VPS36YLR417W YCR006CP25350 157 aa5.08□□□□□ -1.6
VPS36YLR417W PRD1P25375 712 aa5.08□□□□□ -1.6
VPS36YLR417W SEC66P33754 206 aa5.08□□□□□ -1.6
VPS36YLR417W OCT1P35999 772 aa5.08□□□□□ -1.6
VPS36YLR417W ICS2P38284 255 aa5.08□□□□□ -1.6
VPS36YLR417W YJL068CP40363 299 aa5.08□□□□□ -1.6
VPS36YLR417W HOS2P53096 452 aaPredicted RBP5.08□□□□□ -1.6
VPS36YLR417W IPI3P53877 555 aa5.08□□□□□ -1.6
VPS36YLR417W RTT109Q07794 436 aa5.08□□□□□ -1.6
VPS36YLR417W HSP82P02829 709 aaKnown RBP5.07□□□□□ -1.6
VPS36YLR417W MRP13P12686 339 aa5.07□□□□□ -1.6
VPS36YLR417W KRS1P15180 591 aaKnown RBP5.07□□□□□ -1.6
VPS36YLR417W STE50P25344 346 aa5.07□□□□□ -1.6
VPS36YLR417W BOS1P25385 244 aa5.07□□□□□ -1.6
VPS36YLR417W ILV6P25605 309 aaKnown RBP5.07□□□□□ -1.6
VPS36YLR417W CDC60P26637 1090 aaKnown RBP5.07□□□□□ -1.6
VPS36YLR417W PMT1P33775 817 aa5.07□□□□□ -1.6
VPS36YLR417W SAS3P34218 831 aa5.07□□□□□ -1.6
VPS36YLR417W NUP133P36161 1157 aa5.07□□□□□ -1.6
VPS36YLR417W ARN1P38731 627 aa5.07□□□□□ -1.6
VPS36YLR417W ERG26P53199 349 aaKnown RBP5.07□□□□□ -1.6
VPS36YLR417W RMT2Q03305 412 aa5.07□□□□□ -1.6
VPS36YLR417W RPC11Q04307 110 aaPredicted RBP5.07□□□□□ -1.6
VPS36YLR417W PDR8Q06149 701 aa5.07□□□□□ -1.6
VPS36YLR417W TEN1Q07921 160 aa5.07□□□□□ -1.6
VPS36YLR417W MCH4Q08268 501 aa5.07□□□□□ -1.6
VPS36YLR417W ISA2Q12425 185 aa5.07□□□□□ -1.6
VPS36YLR417W GPA1P08539 472 aa5.06□□□□□ -1.6
VPS36YLR417W APN1P22936 367 aa5.06□□□□□ -1.6
VPS36YLR417W YBL055CP34220 418 aaPredicted RBP5.06□□□□□ -1.6
VPS36YLR417W LRP1P38801 184 aaKnown RBP5.06□□□□□ -1.6
VPS36YLR417W TAX4P47030 604 aa5.06□□□□□ -1.6
VPS36YLR417W SNU56Q03782 492 aaKnown RBP5.06□□□□□ -1.6
VPS36YLR417W PIG1Q06216 648 aa5.06□□□□□ -1.6
VPS36YLR417W TPO3Q06451 622 aa5.06□□□□□ -1.6
VPS36YLR417W YLR111WQ12528 110 aa5.06□□□□□ -1.6
VPS36YLR417W CLB2P24869 491 aa5.06□□□□□ -1.6
VPS36YLR417W BUD5P25300 642 aaPredicted RBP5.06□□□□□ -1.6
VPS36YLR417W HOT13P36078 116 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms