RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W MET14Q02196 202 aa3.03□□□□□ -1.92
RPF1YHR088W HIM1Q06674 414 aa3.03□□□□□ -1.92
RPF1YHR088W CDC45Q08032 650 aa3.03□□□□□ -1.92
RPF1YHR088W BSC6Q08280 497 aa3.03□□□□□ -1.92
RPF1YHR088W RDR1Q08904 546 aa3.03□□□□□ -1.92
RPF1YHR088W NKP1Q12493 238 aa3.03□□□□□ -1.92
RPF1YHR088W SPE2P21182 396 aa3.02□□□□□ -1.93
RPF1YHR088W RPS2P25443 254 aaKnown RBP3.02□□□□□ -1.93
RPF1YHR088W UBA4P38820 440 aa3.02□□□□□ -1.93
RPF1YHR088W DPB11P47027 764 aaPredicted RBP3.02□□□□□ -1.93
RPF1YHR088W PKP2P53170 491 aa3.02□□□□□ -1.93
RPF1YHR088W PEX8P53248 589 aa3.02□□□□□ -1.93
RPF1YHR088W TMA16Q08687 178 aa3.02□□□□□ -1.93
RPF1YHR088W SET6Q12529 373 aa3.02□□□□□ -1.93
RPF1YHR088W GAL1P04385 528 aa3.01□□□□□ -1.93
RPF1YHR088W TY2A-LR1P0C2J4 438 aa3.01□□□□□ -1.93
RPF1YHR088W TY2A-FP0CX61 438 aa3.01□□□□□ -1.93
RPF1YHR088W TY2A-GR2P0CX62 438 aa3.01□□□□□ -1.93
RPF1YHR088W TY2A-CP25383 438 aa3.01□□□□□ -1.93
RPF1YHR088W VPS17P32913 551 aa3.01□□□□□ -1.93
RPF1YHR088W PCA1P38360 1216 aa3.01□□□□□ -1.93
RPF1YHR088W UIP3P39547 235 aa3.01□□□□□ -1.93
RPF1YHR088W AXL1P40851 1208 aa3.01□□□□□ -1.93
RPF1YHR088W TY2A-DR2Q03483 438 aa3.01□□□□□ -1.93
RPF1YHR088W HEL2Q05580 639 aaKnown RBP3.01□□□□□ -1.93
RPF1YHR088W YOL057WQ08225 711 aa3.01□□□□□ -1.93
RPF1YHR088W TY2A-BQ12260 438 aa3.01□□□□□ -1.93
RPF1YHR088W TY2A-OR2Q12293 438 aa3.01□□□□□ -1.93
RPF1YHR088W TY2A-DR1Q12392 438 aa3.01□□□□□ -1.93
RPF1YHR088W TY2A-OR1Q12439 438 aa3.01□□□□□ -1.93
RPF1YHR088W TY2A-DR3Q99303 438 aa3.01□□□□□ -1.93
RPF1YHR088W MCK1P21965 375 aaKnown RBP3□□□□□ -1.93
RPF1YHR088W NDC1P32500 655 aa3□□□□□ -1.93
RPF1YHR088W AGP2P38090 596 aa3□□□□□ -1.93
RPF1YHR088W IST3P40565 148 aaPredicted RBP3□□□□□ -1.93
RPF1YHR088W IDP2P41939 412 aa3□□□□□ -1.93
RPF1YHR088W SSK1Q07084 712 aa3□□□□□ -1.93
RPF1YHR088W FMP45Q07651 309 aa3□□□□□ -1.93
RPF1YHR088W TPK1P06244 397 aa2.99□□□□□ -1.93
RPF1YHR088W PHO81P17442 1178 aa2.99□□□□□ -1.93
RPF1YHR088W SPC110P32380 944 aa2.99□□□□□ -1.93
RPF1YHR088W TIF5P38431 405 aaKnown RBP2.99□□□□□ -1.93
RPF1YHR088W ARP1P38696 384 aa2.99□□□□□ -1.93
RPF1YHR088W YFR016CP43597 1233 aaKnown RBP2.99□□□□□ -1.93
RPF1YHR088W COG1P53079 417 aa2.99□□□□□ -1.93
RPF1YHR088W SAM50P53969 484 aa2.99□□□□□ -1.93
RPF1YHR088W RBA50Q04418 439 aa2.99□□□□□ -1.93
RPF1YHR088W THI20Q08224 551 aa2.99□□□□□ -1.93
RPF1YHR088W INP53Q12271 1107 aa2.99□□□□□ -1.93
RPF1YHR088W COX17Q12287 69 aa2.99□□□□□ -1.93
RPF1YHR088W ATP4P05626 244 aa2.98□□□□□ -1.93
RPF1YHR088W LCB1P25045 558 aaKnown RBP2.98□□□□□ -1.93
RPF1YHR088W YCL049CP25577 312 aa2.98□□□□□ -1.93
RPF1YHR088W AGA1P32323 725 aa2.98□□□□□ -1.93
RPF1YHR088W PTR2P32901 601 aa2.98□□□□□ -1.93
RPF1YHR088W ECM15P35195 104 aa2.98□□□□□ -1.93
RPF1YHR088W SNU114P36048 1008 aaKnown RBP2.98□□□□□ -1.93
RPF1YHR088W SLX1P38324 304 aa2.98□□□□□ -1.93
RPF1YHR088W PSF2P40359 213 aa2.98□□□□□ -1.93
RPF1YHR088W PFK26P40433 827 aaKnown RBP2.98□□□□□ -1.93
RPF1YHR088W RPR2P40571 144 aa2.98□□□□□ -1.93
RPF1YHR088W ADE13Q05911 482 aaKnown RBP2.98□□□□□ -1.93
RPF1YHR088W GRC3Q07845 632 aa2.98□□□□□ -1.93
RPF1YHR088W ATG9Q12142 997 aa2.98□□□□□ -1.93
RPF1YHR088W SEC62P21825 274 aa2.97□□□□□ -1.93
RPF1YHR088W SAC6P32599 642 aaKnown RBP2.97□□□□□ -1.93
RPF1YHR088W LAG1P38703 411 aa2.97□□□□□ -1.93
RPF1YHR088W ZDS2P54786 942 aa2.97□□□□□ -1.93
RPF1YHR088W YMR160WQ03823 816 aa2.97□□□□□ -1.93
RPF1YHR088W ETT1Q08421 412 aaKnown RBP2.97□□□□□ -1.93
RPF1YHR088W NUS1Q12063 375 aa2.97□□□□□ -1.93
RPF1YHR088W PDH1Q12428 516 aaKnown RBP2.97□□□□□ -1.93
RPF1YHR088W VCX1Q99385 411 aa2.97□□□□□ -1.93
RPF1YHR088W SNF3P10870 884 aa2.96□□□□□ -1.94
RPF1YHR088W PGS1P25578 521 aa2.96□□□□□ -1.94
RPF1YHR088W SIP2P34164 415 aaKnown RBP2.96□□□□□ -1.94
RPF1YHR088W DIA4P38705 446 aaPredicted RBP2.96□□□□□ -1.94
RPF1YHR088W CSM2P40465 213 aa2.96□□□□□ -1.94
RPF1YHR088W RBG2P53295 368 aaKnown RBP2.96□□□□□ -1.94
RPF1YHR088W ARG81P05085 880 aa2.95□□□□□ -1.94
RPF1YHR088W PUT2P07275 575 aa2.95□□□□□ -1.94
RPF1YHR088W MTF2P10849 440 aa2.95□□□□□ -1.94
RPF1YHR088W ATR1P13090 542 aa2.95□□□□□ -1.94
RPF1YHR088W PMR1P13586 950 aa2.95□□□□□ -1.94
RPF1YHR088W RAD16P31244 790 aa2.95□□□□□ -1.94
RPF1YHR088W YHL041WP38730 149 aa2.95□□□□□ -1.94
RPF1YHR088W PRE5P40302 234 aaKnown RBP2.95□□□□□ -1.94
RPF1YHR088W SGM1P47166 707 aa2.95□□□□□ -1.94
RPF1YHR088W VPS4P52917 437 aa2.95□□□□□ -1.94
RPF1YHR088W BTN2P53286 410 aa2.95□□□□□ -1.94
RPF1YHR088W MRPL13Q02204 264 aa2.95□□□□□ -1.94
RPF1YHR088W INA17Q02888 182 aa2.95□□□□□ -1.94
RPF1YHR088W SDH5Q08230 162 aa2.95□□□□□ -1.94
RPF1YHR088W RPL20AP0CX23 172 aaKnown RBP2.94□□□□□ -1.94
RPF1YHR088W RPL20BP0CX24 172 aaPredicted RBP2.94□□□□□ -1.94
RPF1YHR088W YNG2P38806 282 aaKnown RBP2.94□□□□□ -1.94
RPF1YHR088W PYK2P52489 506 aaKnown RBP2.94□□□□□ -1.94
RPF1YHR088W STR3P53101 465 aaKnown RBP2.94□□□□□ -1.94
RPF1YHR088W EMI2Q04409 500 aaKnown RBP2.94□□□□□ -1.94
RPF1YHR088W PAL1Q05518 499 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms