RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN1	YHR027C	ABF1	P14164	731 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	CBS2	P14905	389 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	HPR1	P17629	752 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	GFD2	P25370	566 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	CHA1	P25379	360 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	NTG1	P31378	399 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	KAP122	P32767	1081 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	SDS22	P36047	338 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	YKL133C	P36066	463 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	MCM7	P38132	845 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	NEM1	P38757	446 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	ORC6	P38826	435 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	ATG7	P38862	630 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	PLB1	P39105	664 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	MNN1	P39106	762 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	LCP5	P40079	357 aa	Predicted RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	NUP82	P40368	713 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	RTT101	P47050	842 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	YJL016W	P47072	561 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	HSH155	P49955	971 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	AIM14	P53109	570 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	COG5	P53951	403 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	YMR099C	Q03161	297 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	HAS1	Q03532	505 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	TRM82	Q03774	444 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	YDR278C	Q05612	105 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	GPN3	Q06543	272 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	CDA2	Q06703	312 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	ATG20	Q07528	640 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	PSR2	Q07949	397 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	DSE3	Q08729	430 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	FRE5	Q08908	694 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	GLO4	Q12320	285 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	RRP12	Q12754	1228 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	FUR4	P05316	633 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	PCK1	P10963	549 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	PHO81	P17442	1178 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	SAR1	P20606	190 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	AMS1	P22855	1083 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	SED4	P25365	1065 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	MSS1	P32559	526 aa	Predicted RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	SUI1	P32911	108 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	PAM1	P37304	830 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	GLO3	P38682	493 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	QNS1	P38795	714 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	DOT6	P40059	670 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	TGL3	P40308	642 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	ALA1	P40825	983 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	CIN1	P40987	1014 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	GSM1	P42950	618 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	MNN5	P46982	586 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	IRC18	P47056	224 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	HOC1	P47124	396 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	RPS7B	P48164	190 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	TPN1	P53099	579 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	YGL117W	P53133	265 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	HHO1	P53551	258 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	OCA2	P53949	197 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	HXT15	P54854	567 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
RPN1	YHR027C	NAN1	Q02931	896 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	YML131W	Q03102	365 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	SWF1	Q04629	336 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	IVY1	Q04934	453 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	YMR226C	Q05016	267 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	NSE3	Q05541	303 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	ESF1	Q06344	628 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	SPO75	Q07798	868 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	SYC1	Q08553	188 aa	Predicted RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	SAM4	Q08985	325 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	ULA1	Q12059	462 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	PAA1	Q12447	191 aa	Known RBP	3.12	□□□□□ -1.91
RPN1	YHR027C	ADF1	Q2V2Q1	113 aa		3.12	□□□□□ -1.91
RPN1	YHR027C	LEU4	P06208	619 aa	Known RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	GCR1	P07261	785 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	WHI2	P12611	486 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	SNT1	P25357	1226 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	MGR1	P25573	417 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	DAL80	P26343	269 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	NAM9	P27929	486 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	HRR25	P29295	494 aa	Known RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	COQ2	P32378	372 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	YKL100C	P34248	587 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	YKL023W	P36103	277 aa	Known RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	SEA4	P38164	1038 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	CST26	P38226	397 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	SIF2	P38262	535 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	YBP1	P38315	674 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	POP4	P38336	279 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	GND1	P38720	489 aa	Known RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	RRP4	P38792	359 aa	Known RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	BZZ1	P38822	633 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	FAA2	P39518	744 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	SAW1	P39735	261 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	AIM10	P39965	576 aa	Known RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	YMR134W	P40207	237 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	VHR1	P40522	640 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	MAD2	P40958	196 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	YJL107C	P42947	387 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	DAK2	P43550	591 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms