RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W MTC7P32633 139 aa4.39□□□□□ -1.71
PRE9YGR135W LHS1P36016 881 aa4.39□□□□□ -1.71
PRE9YGR135W YBL029WP38201 376 aa4.39□□□□□ -1.71
PRE9YGR135W YBR032WP38223 100 aa4.39□□□□□ -1.71
PRE9YGR135W YBR259WP38338 688 aa4.39□□□□□ -1.71
PRE9YGR135W SFB3P38810 929 aa4.39□□□□□ -1.71
PRE9YGR135W TDA11P38854 504 aa4.39□□□□□ -1.71
PRE9YGR135W MSS4P38994 779 aa4.39□□□□□ -1.71
PRE9YGR135W JEM1P40358 645 aa4.39□□□□□ -1.71
PRE9YGR135W IST3P40565 148 aaPredicted RBP4.39□□□□□ -1.71
PRE9YGR135W GCN20P43535 752 aaKnown RBP4.39□□□□□ -1.71
PRE9YGR135W TOS3P43637 560 aa4.39□□□□□ -1.71
PRE9YGR135W BIT61P47041 543 aa4.39□□□□□ -1.71
PRE9YGR135W ZAP1P47043 880 aa4.39□□□□□ -1.71
PRE9YGR135W YGR016WP53209 190 aa4.39□□□□□ -1.71
PRE9YGR135W ASI2P53895 289 aa4.39□□□□□ -1.71
PRE9YGR135W INM2Q05533 292 aa4.39□□□□□ -1.71
PRE9YGR135W NDL1Q06568 189 aa4.39□□□□□ -1.71
PRE9YGR135W MCM21Q06675 368 aa4.39□□□□□ -1.71
PRE9YGR135W YPR078CQ06813 372 aa4.39□□□□□ -1.71
PRE9YGR135W ICL2Q12031 575 aa4.39□□□□□ -1.71
PRE9YGR135W AIM41Q12032 185 aa4.39□□□□□ -1.71
PRE9YGR135W ISA2Q12425 185 aa4.39□□□□□ -1.71
PRE9YGR135W ECM3Q99252 613 aa4.39□□□□□ -1.71
PRE9YGR135W TUB2P02557 457 aaKnown RBP4.38□□□□□ -1.71
PRE9YGR135W SUI3P09064 285 aaKnown RBP4.38□□□□□ -1.71
PRE9YGR135W SEC12P11655 471 aa4.38□□□□□ -1.71
PRE9YGR135W PEP5P12868 1029 aa4.38□□□□□ -1.71
PRE9YGR135W NAT1P12945 854 aaKnown RBP4.38□□□□□ -1.71
PRE9YGR135W RNR1P21524 888 aaKnown RBP4.38□□□□□ -1.71
PRE9YGR135W PRE8P23639 250 aa4.38□□□□□ -1.71
PRE9YGR135W KIN82P25341 720 aa4.38□□□□□ -1.71
PRE9YGR135W KAR9P32526 644 aa4.38□□□□□ -1.71
PRE9YGR135W SSE1P32589 693 aaKnown RBP4.38□□□□□ -1.71
PRE9YGR135W ORC2P32833 620 aa4.38□□□□□ -1.71
PRE9YGR135W SEC66P33754 206 aa4.38□□□□□ -1.71
PRE9YGR135W NUF2P33895 451 aa4.38□□□□□ -1.71
PRE9YGR135W MMS21P38632 267 aa4.38□□□□□ -1.71
PRE9YGR135W YHR112CP38716 378 aa4.38□□□□□ -1.71
PRE9YGR135W LRP1P38801 184 aaKnown RBP4.38□□□□□ -1.71
PRE9YGR135W YIR042CP40586 236 aa4.38□□□□□ -1.71
PRE9YGR135W POL31P46957 487 aa4.38□□□□□ -1.71
PRE9YGR135W GTF1P53260 183 aaPredicted RBP4.38□□□□□ -1.71
PRE9YGR135W RET3P53600 189 aa4.38□□□□□ -1.71
PRE9YGR135W YSA1Q01976 231 aa4.38□□□□□ -1.71
PRE9YGR135W ADY4Q05955 493 aa4.38□□□□□ -1.71
PRE9YGR135W PSR1Q07800 427 aa4.38□□□□□ -1.71
PRE9YGR135W TPO1Q07824 586 aa4.38□□□□□ -1.71
PRE9YGR135W MEU1Q07938 337 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
PRE9YGR135W UPC2Q12151 913 aa4.38□□□□□ -1.71
PRE9YGR135W SNA3P14359 133 aa4.37□□□□□ -1.71
PRE9YGR135W ISY1P21374 235 aaPredicted RBP4.37□□□□□ -1.71
PRE9YGR135W PRO3P32263 286 aaKnown RBP4.37□□□□□ -1.71
PRE9YGR135W DPH2P32461 534 aa4.37□□□□□ -1.71
PRE9YGR135W EFB1P32471 206 aaKnown RBP4.37□□□□□ -1.71
PRE9YGR135W NIP100P33420 868 aa4.37□□□□□ -1.71
PRE9YGR135W YBL055CP34220 418 aaPredicted RBP4.37□□□□□ -1.71
PRE9YGR135W HSM3P38348 480 aa4.37□□□□□ -1.71
PRE9YGR135W STB5P38699 743 aa4.37□□□□□ -1.71
PRE9YGR135W UTP9P38882 575 aaKnown RBP4.37□□□□□ -1.71
PRE9YGR135W LCP5P40079 357 aaPredicted RBP4.37□□□□□ -1.71
PRE9YGR135W AIM20P40451 204 aa4.37□□□□□ -1.71
PRE9YGR135W ARC1P46672 376 aaKnown RBP4.37□□□□□ -1.71
PRE9YGR135W SIP4P46954 829 aa4.37□□□□□ -1.71
PRE9YGR135W MCM6P53091 1017 aaKnown RBP4.37□□□□□ -1.71
PRE9YGR135W VPS62P53285 467 aa4.37□□□□□ -1.71
PRE9YGR135W REG1Q00816 1014 aa4.37□□□□□ -1.71
PRE9YGR135W UTP6Q02354 440 aaKnown RBP4.37□□□□□ -1.71
PRE9YGR135W TRS31Q03337 283 aa4.37□□□□□ -1.71
PRE9YGR135W GTB1Q04924 702 aa4.37□□□□□ -1.71
PRE9YGR135W ENT4Q07872 247 aa4.37□□□□□ -1.71
PRE9YGR135W DIA2Q08496 732 aaPredicted RBP4.37□□□□□ -1.71
PRE9YGR135W CIR2Q08822 631 aa4.37□□□□□ -1.71
PRE9YGR135W LYS21Q12122 440 aaKnown RBP4.37□□□□□ -1.71
PRE9YGR135W POM34Q12445 299 aa4.37□□□□□ -1.71
PRE9YGR135W ATP2P00830 511 aaKnown RBP4.36□□□□□ -1.71
PRE9YGR135W ILV2P07342 687 aaKnown RBP4.36□□□□□ -1.71
PRE9YGR135W TY2A-LR1P0C2J4 438 aa4.36□□□□□ -1.71
PRE9YGR135W TY2A-FP0CX61 438 aa4.36□□□□□ -1.71
PRE9YGR135W TY2A-GR2P0CX62 438 aa4.36□□□□□ -1.71
PRE9YGR135W PET122P10355 254 aa4.36□□□□□ -1.71
PRE9YGR135W CKA2P19454 339 aa4.36□□□□□ -1.71
PRE9YGR135W SPS22P25380 463 aa4.36□□□□□ -1.71
PRE9YGR135W TY2A-CP25383 438 aa4.36□□□□□ -1.71
PRE9YGR135W ERG3P32353 365 aa4.36□□□□□ -1.71
PRE9YGR135W MRP20P32387 263 aa4.36□□□□□ -1.71
PRE9YGR135W CTF13P35203 478 aa4.36□□□□□ -1.71
PRE9YGR135W SRL3P36167 246 aa4.36□□□□□ -1.71
PRE9YGR135W RFC3P38629 340 aa4.36□□□□□ -1.71
PRE9YGR135W NUP60P39705 539 aa4.36□□□□□ -1.71
PRE9YGR135W LSM5P40089 93 aaKnown RBP4.36□□□□□ -1.71
PRE9YGR135W SDS3P40505 327 aa4.36□□□□□ -1.71
PRE9YGR135W SEC27P41811 889 aaKnown RBP4.36□□□□□ -1.71
PRE9YGR135W SKP2P42843 763 aa4.36□□□□□ -1.71
PRE9YGR135W MRX6P48564 524 aa4.36□□□□□ -1.71
PRE9YGR135W BRO1P48582 844 aa4.36□□□□□ -1.71
PRE9YGR135W GCV2P49095 1034 aa4.36□□□□□ -1.71
PRE9YGR135W SHE10P53075 577 aa4.36□□□□□ -1.71
PRE9YGR135W COS6P53344 381 aa4.36□□□□□ -1.71
PRE9YGR135W RPL22BP56628 122 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 72.8 ms