RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeast

Gene SCL1, Length 759 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCL1	YGL011C	ANS1	P38832	159 aa		4.81	□□□□□ -1.64
SCL1	YGL011C	AFG3	P39925	761 aa		4.81	□□□□□ -1.64
SCL1	YGL011C	LYS20	P48570	428 aa	Known RBP	4.81	□□□□□ -1.64
SCL1	YGL011C	GLO1	P50107	326 aa		4.81	□□□□□ -1.64
SCL1	YGL011C	BUD22	Q04347	519 aa	Known RBP	4.81	□□□□□ -1.64
SCL1	YGL011C	DPB4	Q04603	196 aa	Known RBP	4.81	□□□□□ -1.64
SCL1	YGL011C	MFB1	Q04922	465 aa		4.81	□□□□□ -1.64
SCL1	YGL011C	ADE13	Q05911	482 aa	Known RBP	4.81	□□□□□ -1.64
SCL1	YGL011C	CTI6	Q08923	506 aa		4.81	□□□□□ -1.64
SCL1	YGL011C	APL4	Q12028	832 aa		4.81	□□□□□ -1.64
SCL1	YGL011C	YPR089W	O13585	888 aa		4.8	□□□□□ -1.64
SCL1	YGL011C	YPT1	P01123	206 aa	Known RBP	4.8	□□□□□ -1.64
SCL1	YGL011C	KGD1	P20967	1014 aa	Known RBP	4.8	□□□□□ -1.64
SCL1	YGL011C	SPE2	P21182	396 aa		4.8	□□□□□ -1.64
SCL1	YGL011C	AIM17	P23180	465 aa	Known RBP	4.8	□□□□□ -1.64
SCL1	YGL011C	YCP4	P25349	247 aa	Known RBP	4.8	□□□□□ -1.64
SCL1	YGL011C	SYN8	P31377	255 aa		4.8	□□□□□ -1.64
SCL1	YGL011C	NOP4	P37838	685 aa	Known RBP	4.8	□□□□□ -1.64
SCL1	YGL011C	CCT6	P39079	546 aa		4.8	□□□□□ -1.64
SCL1	YGL011C	VRG4	P40107	337 aa		4.8	□□□□□ -1.64
SCL1	YGL011C	ESL1	P40456	1118 aa		4.8	□□□□□ -1.64
SCL1	YGL011C	HXT9	P40885	567 aa		4.8	□□□□□ -1.64
SCL1	YGL011C	VPS75	P53853	264 aa		4.8	□□□□□ -1.64
SCL1	YGL011C	GRC3	Q07845	632 aa		4.8	□□□□□ -1.64
SCL1	YGL011C	RPL42A	P0CX27	106 aa	Known RBP	4.79	□□□□□ -1.64
SCL1	YGL011C	RPL42B	P0CX28	106 aa	Known RBP	4.79	□□□□□ -1.64
SCL1	YGL011C	MIA40	P36046	403 aa		4.79	□□□□□ -1.64
SCL1	YGL011C	STV1	P37296	890 aa		4.79	□□□□□ -1.64
SCL1	YGL011C	TSC10	P38342	320 aa		4.79	□□□□□ -1.64
SCL1	YGL011C	LEU5	P38702	357 aa		4.79	□□□□□ -1.64
SCL1	YGL011C	GND1	P38720	489 aa	Known RBP	4.79	□□□□□ -1.64
SCL1	YGL011C	NPR2	P39923	615 aa		4.79	□□□□□ -1.64
SCL1	YGL011C	YIL060W	P40519	144 aa		4.79	□□□□□ -1.64
SCL1	YGL011C	MAF1	P41910	395 aa		4.79	□□□□□ -1.64
SCL1	YGL011C	SGM1	P47166	707 aa		4.79	□□□□□ -1.64
SCL1	YGL011C	EFM6	P53970	246 aa		4.79	□□□□□ -1.64
SCL1	YGL011C	IZH1	Q03419	316 aa		4.79	□□□□□ -1.64
SCL1	YGL011C	MCP2	Q06567	569 aa		4.79	□□□□□ -1.64
SCL1	YGL011C	POS5	Q06892	414 aa		4.79	□□□□□ -1.64
SCL1	YGL011C	LUC7	Q07508	261 aa	Predicted RBP	4.79	□□□□□ -1.64
SCL1	YGL011C	TEN1	Q07921	160 aa		4.79	□□□□□ -1.64
SCL1	YGL011C	RPS10A	Q08745	105 aa	Predicted RBP	4.79	□□□□□ -1.64
SCL1	YGL011C	BUD7	Q08754	746 aa		4.79	□□□□□ -1.64
SCL1	YGL011C	RCN2	Q12044	265 aa		4.79	□□□□□ -1.64
SCL1	YGL011C	ATX2	Q12067	313 aa		4.79	□□□□□ -1.64
SCL1	YGL011C	LEU9	Q12166	604 aa	Known RBP	4.79	□□□□□ -1.64
SCL1	YGL011C	EDE1	P34216	1381 aa		4.78	□□□□□ -1.64
SCL1	YGL011C	MF(ALPHA)1	P01149	165 aa		4.78	□□□□□ -1.64
SCL1	YGL011C	CMK1	P27466	446 aa	Known RBP	4.78	□□□□□ -1.64
SCL1	YGL011C	PEP3	P27801	918 aa		4.78	□□□□□ -1.64
SCL1	YGL011C	DBP8	P38719	431 aa		4.78	□□□□□ -1.64
SCL1	YGL011C	PCI8	P40512	444 aa		4.78	□□□□□ -1.64
SCL1	YGL011C	RPS10B	P46784	105 aa	Known RBP	4.78	□□□□□ -1.64
SCL1	YGL011C	IRC8	P47046	822 aa		4.78	□□□□□ -1.64
SCL1	YGL011C	RBG2	P53295	368 aa	Known RBP	4.78	□□□□□ -1.64
SCL1	YGL011C	MDM1	Q01846	1127 aa		4.78	□□□□□ -1.64
SCL1	YGL011C	EMI2	Q04409	500 aa	Known RBP	4.78	□□□□□ -1.64
SCL1	YGL011C	UTP21	Q06078	939 aa	Predicted RBP	4.78	□□□□□ -1.64
SCL1	YGL011C	ATG26	Q06321	1198 aa		4.78	□□□□□ -1.64
SCL1	YGL011C	YEH1	Q07804	573 aa		4.78	□□□□□ -1.64
SCL1	YGL011C	GSH2	Q08220	491 aa		4.78	□□□□□ -1.64
SCL1	YGL011C	YPT6	Q99260	215 aa		4.78	□□□□□ -1.64
SCL1	YGL011C	GCN4	P03069	281 aa		4.77	□□□□□ -1.65
SCL1	YGL011C	CBS1	P14066	229 aa		4.77	□□□□□ -1.65
SCL1	YGL011C	PUP3	P25451	205 aa	Known RBP	4.77	□□□□□ -1.65
SCL1	YGL011C	SRO77	P38163	1010 aa		4.77	□□□□□ -1.65
SCL1	YGL011C	RGI2	P40188	164 aa		4.77	□□□□□ -1.65
SCL1	YGL011C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
SCL1	YGL011C	YIR016W	P40572	265 aa		4.77	□□□□□ -1.65
SCL1	YGL011C	ARP10	Q04549	284 aa		4.77	□□□□□ -1.65
SCL1	YGL011C	YDL218W	Q07629	317 aa		4.77	□□□□□ -1.65
SCL1	YGL011C	GEP3	Q08622	556 aa		4.77	□□□□□ -1.65
SCL1	YGL011C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
SCL1	YGL011C	SGS1	P35187	1447 aa		4.77	□□□□□ -1.65
SCL1	YGL011C	CBP1	P07252	654 aa		4.76	□□□□□ -1.65
SCL1	YGL011C	MRP7	P12687	371 aa		4.76	□□□□□ -1.65
SCL1	YGL011C	EST1	P17214	699 aa	Predicted RBP	4.76	□□□□□ -1.65
SCL1	YGL011C	RPB8	P20436	146 aa		4.76	□□□□□ -1.65
SCL1	YGL011C	IMG1	P25626	169 aa		4.76	□□□□□ -1.65
SCL1	YGL011C	GAC1	P28006	793 aa		4.76	□□□□□ -1.65
SCL1	YGL011C	ASK1	P35734	292 aa		4.76	□□□□□ -1.65
SCL1	YGL011C	UBP11	P36026	717 aa		4.76	□□□□□ -1.65
SCL1	YGL011C	REG2	P38232	338 aa		4.76	□□□□□ -1.65
SCL1	YGL011C	MDV1	P47025	714 aa		4.76	□□□□□ -1.65
SCL1	YGL011C	PKP2	P53170	491 aa		4.76	□□□□□ -1.65
SCL1	YGL011C	SCW4	P53334	386 aa	Known RBP	4.76	□□□□□ -1.65
SCL1	YGL011C	RPC11	Q04307	110 aa	Predicted RBP	4.76	□□□□□ -1.65
SCL1	YGL011C	TDA9	Q04545	1251 aa		4.76	□□□□□ -1.65
SCL1	YGL011C	TSR2	Q06672	205 aa	Known RBP	4.76	□□□□□ -1.65
SCL1	YGL011C	ECM30	Q06673	1274 aa		4.76	□□□□□ -1.65
SCL1	YGL011C	AFT2	Q08957	416 aa		4.76	□□□□□ -1.65
SCL1	YGL011C	FMP40	Q08968	688 aa	Predicted RBP	4.76	□□□□□ -1.65
SCL1	YGL011C	YJR112W-A	Q3E743	109 aa		4.76	□□□□□ -1.65
SCL1	YGL011C	INH1	P01097	85 aa		4.75	□□□□□ -1.65
SCL1	YGL011C	MRP13	P12686	339 aa		4.75	□□□□□ -1.65
SCL1	YGL011C	SSE2	P32590	693 aa	Known RBP	4.75	□□□□□ -1.65
SCL1	YGL011C	TIF3	P34167	436 aa	Known RBP	4.75	□□□□□ -1.65
SCL1	YGL011C	YBL055C	P34220	418 aa	Predicted RBP	4.75	□□□□□ -1.65
SCL1	YGL011C	NUP133	P36161	1157 aa		4.75	□□□□□ -1.65
SCL1	YGL011C	APT1	P49435	187 aa	Known RBP	4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms